RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 DDHD2O94830 711 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 LSM8O95777 96 aaKnown RBP11.51□□□□□ -0.57
LINC01550-206ENST00000556462 CLTBP09497 229 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 FAM163BP0C2L3 166 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 MMP8P22894 467 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 GNL1P36915 607 aaPredicted RBP11.51□□□□□ -0.57
LINC01550-206ENST00000556462 IFI16Q16666 785 aaKnown RBP11.51□□□□□ -0.57
LINC01550-206ENST00000556462 NOMO2Q5JPE7 1267 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 DENND1BQ6P3S1 775 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 ACOT1Q86TX2 421 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 ZNF280BQ86YH2 543 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 CRYBG2Q8N1P7 616 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 TMEM35BQ8NCS4 154 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 ZNF653Q96CK0 615 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 DDX27Q96GQ7 796 aaKnown RBP11.51□□□□□ -0.57
LINC01550-206ENST00000556462 VCPIP1Q96JH7 1222 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 SENP8Q96LD8 212 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 TMEM106CQ9BVX2 250 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 TLR10Q9BXR5 811 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 ZNF518BQ9C0D4 1074 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 GOLPH3Q9H4A6 298 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.51□□□□□ -0.57
LINC01550-206ENST00000556462 STXBP5LQ9Y2K9 1186 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 SCN5AQ14524 2016 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 A8MXQ7 604 aa11.5□□□□□ -0.57
LINC01550-206ENST00000556462 B3GAT3O94766 335 aa11.5□□□□□ -0.57
LINC01550-206ENST00000556462 MTA2O94776 668 aa11.5□□□□□ -0.57
LINC01550-206ENST00000556462 MICAL2O94851 1124 aa11.5□□□□□ -0.57
LINC01550-206ENST00000556462 WARSP23381 471 aaKnown RBP11.5□□□□□ -0.57
LINC01550-206ENST00000556462 RRM1P23921 792 aa11.5□□□□□ -0.57
LINC01550-206ENST00000556462 ITGB8P26012 769 aa11.5□□□□□ -0.57
LINC01550-206ENST00000556462 DSC1Q08554 894 aa11.5□□□□□ -0.57
LINC01550-206ENST00000556462 TIGD5Q53EQ6 642 aa11.5□□□□□ -0.57
LINC01550-206ENST00000556462 SGO2Q562F6 1265 aa11.5□□□□□ -0.57
LINC01550-206ENST00000556462 WSCD1Q658N2 575 aa11.5□□□□□ -0.57
LINC01550-206ENST00000556462 NECAB2Q7Z6G3 386 aa11.5□□□□□ -0.57
LINC01550-206ENST00000556462 DEFB128Q7Z7B8 93 aa11.5□□□□□ -0.57
LINC01550-206ENST00000556462 OSTM1Q86WC4 334 aa11.5□□□□□ -0.57
LINC01550-206ENST00000556462 ADGRF2Q8IZF7 708 aa11.5□□□□□ -0.57
LINC01550-206ENST00000556462 C1orf131Q8NDD1 294 aaKnown RBP11.5□□□□□ -0.57
LINC01550-206ENST00000556462 DPEP3Q9H4B8 488 aa11.5□□□□□ -0.57
LINC01550-206ENST00000556462 CTTNBP2NLQ9P2B4 639 aa11.5□□□□□ -0.57
LINC01550-206ENST00000556462 CNOT8Q9UFF9 292 aaKnown RBP11.5□□□□□ -0.57
LINC01550-206ENST00000556462 CYTH4Q9UIA0 394 aa11.5□□□□□ -0.57
LINC01550-206ENST00000556462 PCDHB7Q9Y5E2 793 aa11.5□□□□□ -0.57
LINC01550-206ENST00000556462 MRFAP1Q9Y605 127 aa11.5□□□□□ -0.57
LINC01550-206ENST00000556462 BUB1BO60566 1050 aaPredicted RBP11.5□□□□□ -0.57
LINC01550-206ENST00000556462 FTCDO95954 541 aa11.5□□□□□ -0.57
LINC01550-206ENST00000556462 PDGFRBP09619 1106 aa11.5□□□□□ -0.57
LINC01550-206ENST00000556462 CAPN2P17655 700 aa11.5□□□□□ -0.57
LINC01550-206ENST00000556462 GPD2P43304 727 aa11.5□□□□□ -0.57
LINC01550-206ENST00000556462 C1QBPQ07021 282 aaKnown RBP11.5□□□□□ -0.57
LINC01550-206ENST00000556462 PPP1R26Q5T8A7 1209 aaPredicted RBP11.5□□□□□ -0.57
LINC01550-206ENST00000556462 MEI1Q5TIA1 1274 aa11.5□□□□□ -0.57
LINC01550-206ENST00000556462 PPP1R2P3Q6NXS1 205 aa11.5□□□□□ -0.57
LINC01550-206ENST00000556462 LLGL2Q6P1M3 1020 aa11.5□□□□□ -0.57
LINC01550-206ENST00000556462 LCLAT1Q6UWP7 414 aa11.5□□□□□ -0.57
LINC01550-206ENST00000556462 UROC1Q96N76 676 aa11.5□□□□□ -0.57
LINC01550-206ENST00000556462 LPIN3Q9BQK8 851 aa11.5□□□□□ -0.57
LINC01550-206ENST00000556462 C11orf70Q9BRQ4 267 aa11.5□□□□□ -0.57
LINC01550-206ENST00000556462 ABCB6Q9NP58 842 aa11.5□□□□□ -0.57
LINC01550-206ENST00000556462 AVENQ9NQS1 362 aaPredicted RBP11.5□□□□□ -0.57
LINC01550-206ENST00000556462 TBC1D13Q9NVG8 400 aa11.5□□□□□ -0.57
LINC01550-206ENST00000556462 ADAM22Q9P0K1 906 aa11.5□□□□□ -0.57
LINC01550-206ENST00000556462 KANSL3Q9P2N6 904 aa11.5□□□□□ -0.57
LINC01550-206ENST00000556462 TTC3P53804 2025 aa11.49□□□□□ -0.57
LINC01550-206ENST00000556462 TRIM43BA6NCK2 446 aa11.49□□□□□ -0.57
LINC01550-206ENST00000556462 F8W810 466 aa11.49□□□□□ -0.57
LINC01550-206ENST00000556462 NCK2O43639 380 aa11.49□□□□□ -0.57
LINC01550-206ENST00000556462 ITGB1P05556 798 aa11.49□□□□□ -0.57
LINC01550-206ENST00000556462 MYBL1P10243 752 aa11.49□□□□□ -0.57
LINC01550-206ENST00000556462 PAN2Q504Q3 1202 aaKnown RBP11.49□□□□□ -0.57
LINC01550-206ENST00000556462 PKDCCQ504Y2 493 aa11.49□□□□□ -0.57
LINC01550-206ENST00000556462 DCLRE1AQ6PJP8 1040 aa11.49□□□□□ -0.57
LINC01550-206ENST00000556462 MMS22LQ6ZRQ5 1243 aa11.49□□□□□ -0.57
LINC01550-206ENST00000556462 COLGALT2Q8IYK4 626 aa11.49□□□□□ -0.57
LINC01550-206ENST00000556462 TRIM43Q96BQ3 446 aaPredicted RBP11.49□□□□□ -0.57
LINC01550-206ENST00000556462 TRIM11Q96F44 468 aa11.49□□□□□ -0.57
LINC01550-206ENST00000556462 CASD1Q96PB1 797 aa11.49□□□□□ -0.57
LINC01550-206ENST00000556462 NUP85Q9BW27 656 aa11.49□□□□□ -0.57
LINC01550-206ENST00000556462 SNX25Q9H3E2 840 aa11.49□□□□□ -0.57
LINC01550-206ENST00000556462 UVRAGQ9P2Y5 699 aa11.49□□□□□ -0.57
LINC01550-206ENST00000556462 CDC23Q9UJX2 597 aa11.49□□□□□ -0.57
LINC01550-206ENST00000556462 TSPAN16Q9UKR8 245 aa11.49□□□□□ -0.57
LINC01550-206ENST00000556462 CEP83Q9Y592 693 aa11.49□□□□□ -0.57
LINC01550-206ENST00000556462 SAR1BQ9Y6B6 198 aa11.49□□□□□ -0.57
LINC01550-206ENST00000556462 SRGAP2O75044 1071 aa11.48□□□□□ -0.57
LINC01550-206ENST00000556462 PFKMP08237 780 aa11.48□□□□□ -0.57
LINC01550-206ENST00000556462 PRLRP16471 622 aa11.48□□□□□ -0.57
LINC01550-206ENST00000556462 BRCC3P46736 316 aa11.48□□□□□ -0.57
LINC01550-206ENST00000556462 ARHGAP17Q68EM7 881 aa11.48□□□□□ -0.57
LINC01550-206ENST00000556462 PLEKHA7Q6IQ23 1121 aa11.48□□□□□ -0.57
LINC01550-206ENST00000556462 DSTYKQ6XUX3 929 aa11.48□□□□□ -0.57
LINC01550-206ENST00000556462 PHLDB2Q86SQ0 1253 aa11.48□□□□□ -0.57
LINC01550-206ENST00000556462 DAAM2Q86T65 1068 aa11.48□□□□□ -0.57
LINC01550-206ENST00000556462 UBA3Q8TBC4 463 aa11.48□□□□□ -0.57
LINC01550-206ENST00000556462 ZNF564Q8TBZ8 553 aaPredicted RBP11.48□□□□□ -0.57
LINC01550-206ENST00000556462 URGCPQ8TCY9 931 aa11.48□□□□□ -0.57
LINC01550-206ENST00000556462 CALR3Q96L12 384 aaKnown RBP11.48□□□□□ -0.57
LINC01550-206ENST00000556462 MCOLN1Q9GZU1 580 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms