RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 CHADO15335 359 aa24.34■■□□□ 1.49
ACTN1-220ENST00000556433 MTAPQ13126 283 aa24.34■■□□□ 1.49
ACTN1-220ENST00000556433 CSGALNACT2Q8N6G5 542 aa24.34■■□□□ 1.49
ACTN1-220ENST00000556433 ATRIPQ8WXE1 791 aa24.34■■□□□ 1.49
ACTN1-220ENST00000556433 TASP1Q9H6P5 420 aa24.34■■□□□ 1.49
ACTN1-220ENST00000556433 PDE11AQ9HCR9 933 aa24.34■■□□□ 1.49
ACTN1-220ENST00000556433 ARNTLO00327 626 aa24.33■■□□□ 1.49
ACTN1-220ENST00000556433 PPP6R2O75170 966 aa24.33■■□□□ 1.49
ACTN1-220ENST00000556433 CCNE1P24864 410 aa24.33■■□□□ 1.49
ACTN1-220ENST00000556433 CDC25CP30307 473 aa24.33■■□□□ 1.49
ACTN1-220ENST00000556433 CYP4F8P98187 520 aa24.33■■□□□ 1.49
ACTN1-220ENST00000556433 TSPY1Q01534 308 aa24.33■■□□□ 1.49
ACTN1-220ENST00000556433 FCHO2Q0JRZ9 810 aa24.33■■□□□ 1.49
ACTN1-220ENST00000556433 BFSP1Q12934 665 aa24.33■■□□□ 1.49
ACTN1-220ENST00000556433 SCARA3Q6AZY7 606 aa24.33■■□□□ 1.49
ACTN1-220ENST00000556433 TSSK4Q6SA08 328 aa24.33■■□□□ 1.49
ACTN1-220ENST00000556433 STXBP4Q6ZWJ1 553 aa24.33■■□□□ 1.49
ACTN1-220ENST00000556433 PDCL2Q8N4E4 241 aa24.33■■□□□ 1.49
ACTN1-220ENST00000556433 HPS3Q969F9 1004 aa24.33■■□□□ 1.49
ACTN1-220ENST00000556433 FAM84AQ96KN4 292 aa24.33■■□□□ 1.49
ACTN1-220ENST00000556433 LRRC3BQ96PB8 259 aa24.33■■□□□ 1.49
ACTN1-220ENST00000556433 GCNAQ96QF7 691 aa24.33■■□□□ 1.49
ACTN1-220ENST00000556433 HINFPQ9BQA5 517 aa24.33■■□□□ 1.49
ACTN1-220ENST00000556433 TNMDQ9H2S6 317 aa24.33■■□□□ 1.49
ACTN1-220ENST00000556433 IL21Q9HBE4 155 aa24.33■■□□□ 1.49
ACTN1-220ENST00000556433 TMLHEQ9NVH6 421 aa24.33■■□□□ 1.49
ACTN1-220ENST00000556433 PCDHB5Q9Y5E4 795 aa24.33■■□□□ 1.49
ACTN1-220ENST00000556433 PCDHGA2Q9Y5H1 932 aa24.33■■□□□ 1.49
ACTN1-220ENST00000556433 HUS1O60921 280 aa24.32■■□□□ 1.48
ACTN1-220ENST00000556433 KRT19P08727 400 aa24.32■■□□□ 1.48
ACTN1-220ENST00000556433 KPNA1P52294 538 aaPredicted RBP24.32■■□□□ 1.48
ACTN1-220ENST00000556433 MLLT6P55198 1093 aaPredicted RBP24.32■■□□□ 1.48
ACTN1-220ENST00000556433 RBP5P82980 135 aa24.32■■□□□ 1.48
ACTN1-220ENST00000556433 FOXD4L5Q5VV16 416 aaPredicted RBP24.32■■□□□ 1.48
ACTN1-220ENST00000556433 GPD1LQ8N335 351 aa24.32■■□□□ 1.48
ACTN1-220ENST00000556433 LRRC52Q8N7C0 313 aa24.32■■□□□ 1.48
ACTN1-220ENST00000556433 FOXD4L4Q8WXT5 416 aaPredicted RBP24.32■■□□□ 1.48
ACTN1-220ENST00000556433 CHRDQ9H2X0 955 aa24.32■■□□□ 1.48
ACTN1-220ENST00000556433 KBTBD4Q9NVX7 518 aa24.32■■□□□ 1.48
ACTN1-220ENST00000556433 ZSCAN32Q9NX65 697 aa24.32■■□□□ 1.48
ACTN1-220ENST00000556433 ITGA11Q9UKX5 1188 aa24.32■■□□□ 1.48
ACTN1-220ENST00000556433 L1RE1Q9UN81 338 aa24.32■■□□□ 1.48
ACTN1-220ENST00000556433 AMPD3Q01432 767 aa24.31■■□□□ 1.48
ACTN1-220ENST00000556433 E2F4Q16254 413 aa24.31■■□□□ 1.48
ACTN1-220ENST00000556433 ARHGAP29Q52LW3 1261 aa24.31■■□□□ 1.48
ACTN1-220ENST00000556433 SUMF1Q8NBK3 374 aa24.31■■□□□ 1.48
ACTN1-220ENST00000556433 GLIS3Q8NEA6 775 aa24.31■■□□□ 1.48
ACTN1-220ENST00000556433 CXorf38Q8TB03 319 aa24.31■■□□□ 1.48
ACTN1-220ENST00000556433 RUBCNQ92622 972 aa24.31■■□□□ 1.48
ACTN1-220ENST00000556433 DHX58Q96C10 678 aa24.31■■□□□ 1.48
ACTN1-220ENST00000556433 ACBD6Q9BR61 282 aa24.31■■□□□ 1.48
ACTN1-220ENST00000556433 PI4K2AQ9BTU6 479 aa24.31■■□□□ 1.48
ACTN1-220ENST00000556433 CUEDC2Q9H467 287 aa24.31■■□□□ 1.48
ACTN1-220ENST00000556433 C8orf33Q9H7E9 229 aaPredicted RBP24.31■■□□□ 1.48
ACTN1-220ENST00000556433 PRMT8Q9NR22 394 aaPredicted RBP24.31■■□□□ 1.48
ACTN1-220ENST00000556433 DDX43Q9NXZ2 648 aaKnown RBP24.31■■□□□ 1.48
ACTN1-220ENST00000556433 OBP2AQ9NY56 170 aa24.31■■□□□ 1.48
ACTN1-220ENST00000556433 SPTBN4Q9H254 2564 aa24.31■■□□□ 1.48
ACTN1-220ENST00000556433 TSC2P49815 1807 aa24.31■■□□□ 1.48
ACTN1-220ENST00000556433 SLC38A8A6NNN8 435 aa24.3■■□□□ 1.48
ACTN1-220ENST00000556433 KIAA0391O15091 583 aaKnown RBP24.3■■□□□ 1.48
ACTN1-220ENST00000556433 CUTAO60888 179 aa24.3■■□□□ 1.48
ACTN1-220ENST00000556433 PRPF40AO75400 957 aaKnown RBP24.3■■□□□ 1.48
ACTN1-220ENST00000556433 TMEM191BP0C7N4 346 aa24.3■■□□□ 1.48
ACTN1-220ENST00000556433 WEE1P30291 646 aa24.3■■□□□ 1.48
ACTN1-220ENST00000556433 ID4P47928 161 aa24.3■■□□□ 1.48
ACTN1-220ENST00000556433 SOX9P48436 509 aa24.3■■□□□ 1.48
ACTN1-220ENST00000556433 MYL7Q01449 175 aa24.3■■□□□ 1.48
ACTN1-220ENST00000556433 NFE2Q16621 373 aaPredicted RBP24.3■■□□□ 1.48
ACTN1-220ENST00000556433 TMEM86AQ8N2M4 240 aa24.3■■□□□ 1.48
ACTN1-220ENST00000556433 ZBTB44Q8NCP5 570 aa24.3■■□□□ 1.48
ACTN1-220ENST00000556433 TTC8Q8TAM2 541 aa24.3■■□□□ 1.48
ACTN1-220ENST00000556433 SNX21Q969T3 373 aa24.3■■□□□ 1.48
ACTN1-220ENST00000556433 ZFYVE19Q96K21 471 aa24.3■■□□□ 1.48
ACTN1-220ENST00000556433 SLC46A2Q9BY10 475 aa24.3■■□□□ 1.48
ACTN1-220ENST00000556433 TRIM9Q9C026 710 aa24.3■■□□□ 1.48
ACTN1-220ENST00000556433 MTMR12Q9C0I1 747 aa24.3■■□□□ 1.48
ACTN1-220ENST00000556433 R3HCC1Q9Y3T6 440 aaKnown RBP24.3■■□□□ 1.48
ACTN1-220ENST00000556433 SNX9Q9Y5X1 595 aa24.3■■□□□ 1.48
ACTN1-220ENST00000556433 FANCMQ8IYD8 2048 aa24.29■■□□□ 1.48
ACTN1-220ENST00000556433 ZNF233A6NK53 670 aa24.29■■□□□ 1.48
ACTN1-220ENST00000556433 PRAMEF12O95522 483 aa24.29■■□□□ 1.48
ACTN1-220ENST00000556433 YEATS4O95619 227 aa24.29■■□□□ 1.48
ACTN1-220ENST00000556433 CHRNB1P11230 501 aa24.29■■□□□ 1.48
ACTN1-220ENST00000556433 ACAT1P24752 427 aaKnown RBP24.29■■□□□ 1.48
ACTN1-220ENST00000556433 LMBRD2Q68DH5 695 aaPredicted RBP24.29■■□□□ 1.48
ACTN1-220ENST00000556433 C1orf228Q6PIY5 440 aa24.29■■□□□ 1.48
ACTN1-220ENST00000556433 MAMSTRQ6ZN01 415 aa24.29■■□□□ 1.48
ACTN1-220ENST00000556433 KIAA2013Q8IYS2 634 aa24.29■■□□□ 1.48
ACTN1-220ENST00000556433 DCLK2Q8N568 766 aa24.29■■□□□ 1.48
ACTN1-220ENST00000556433 IQUBQ8NA54 791 aa24.29■■□□□ 1.48
ACTN1-220ENST00000556433 BPIFB1Q8TDL5 484 aa24.29■■□□□ 1.48
ACTN1-220ENST00000556433 NELL1Q92832 810 aa24.29■■□□□ 1.48
ACTN1-220ENST00000556433 MSANTD3Q96H12 275 aa24.29■■□□□ 1.48
ACTN1-220ENST00000556433 ANKRD36BP1Q96IX9 119 aa24.29■■□□□ 1.48
ACTN1-220ENST00000556433 IER2Q9BTL4 223 aa24.29■■□□□ 1.48
ACTN1-220ENST00000556433 SMG9Q9H0W8 520 aaKnown RBP24.29■■□□□ 1.48
ACTN1-220ENST00000556433 GDAP2Q9NXN4 497 aa24.29■■□□□ 1.48
ACTN1-220ENST00000556433 SIX4Q9UIU6 781 aa24.29■■□□□ 1.48
ACTN1-220ENST00000556433 TCHHQ07283 1943 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms