RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 KRT20P35900 424 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 GCLCP48506 637 aaPredicted RBP5.38□□□□□ -1.55
TMEM260-210ENST00000556422 GALCP54803 685 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 SNRNP35Q16560 246 aaKnown RBP5.38□□□□□ -1.55
TMEM260-210ENST00000556422 CCNI2Q6ZMN8 369 aaPredicted RBP5.38□□□□□ -1.55
TMEM260-210ENST00000556422 HDXQ7Z353 690 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 OR8H2Q8N162 312 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 AENQ8WTP8 325 aaKnown RBP5.38□□□□□ -1.55
TMEM260-210ENST00000556422 SEMA4DQ92854 862 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 MAELQ96JY0 434 aaKnown RBP5.38□□□□□ -1.55
TMEM260-210ENST00000556422 FAM84AQ96KN4 292 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 VRTNQ9H8Y1 702 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 PDE11AQ9HCR9 933 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 FKBP14Q9NWM8 211 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 ARHGAP28Q9P2N2 729 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 STXBP5LQ9Y2K9 1186 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 TSC22D4Q9Y3Q8 395 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 NCANO14594 1321 aa5.38□□□□□ -1.55
TMEM260-210ENST00000556422 A0A0A6YYK5 440 aaPredicted RBP5.37□□□□□ -1.55
TMEM260-210ENST00000556422 FAM170AA1A519 330 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 ZSCAN5CA6NGD5 496 aaPredicted RBP5.37□□□□□ -1.55
TMEM260-210ENST00000556422 GOLGA8MH3BSY2 632 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 DNA2P51530 1060 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 WNT7BP56706 349 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 SNRPFP62306 86 aaKnown RBP5.37□□□□□ -1.55
TMEM260-210ENST00000556422 SP4Q02446 784 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 DMP1Q13316 513 aaPredicted RBP5.37□□□□□ -1.55
TMEM260-210ENST00000556422 TAF12Q16514 161 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 NXNQ6DKJ4 435 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 ZBTB8BQ8NAP8 495 aaPredicted RBP5.37□□□□□ -1.55
TMEM260-210ENST00000556422 MDM1Q8TC05 714 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 SLC20A1Q8WUM9 679 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 CEP170P1Q96L14 293 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 KREMEN1Q96MU8 473 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 GDAP1L1Q96MZ0 367 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 NELL2Q99435 816 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 POP1Q99575 1024 aaKnown RBP5.37□□□□□ -1.55
TMEM260-210ENST00000556422 MTMR12Q9C0I1 747 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 ACP6Q9NPH0 428 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 CYP26B1Q9NR63 512 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 TOPORSQ9NS56 1045 aaPredicted RBP5.37□□□□□ -1.55
TMEM260-210ENST00000556422 MAFBQ9Y5Q3 323 aaPredicted RBP5.37□□□□□ -1.55
TMEM260-210ENST00000556422 IGKV6D-21A0A0A0MT36 114 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 TRIM43BA6NCK2 446 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 DGAT1O75907 488 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 APOEP02649 317 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 EDN1P05305 212 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 FESP07332 822 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 EDNRBP24530 442 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 ICAM3P32942 547 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 HOXD12P35452 270 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 PPATQ06203 517 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 KLC1Q07866 573 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 PPIDQ08752 370 aaKnown RBP5.37□□□□□ -1.55
TMEM260-210ENST00000556422 RALGDSQ12967 914 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 ARHGAP44Q17R89 818 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 MTERF2Q49AM1 385 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 SLAIN1Q8ND83 568 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 PPHLN1Q8NEY8 458 aaKnown RBP5.37□□□□□ -1.55
TMEM260-210ENST00000556422 CDC26Q8NHZ8 85 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 U2AF1L4Q8WU68 220 aaKnown RBP5.37□□□□□ -1.55
TMEM260-210ENST00000556422 JPH3Q8WXH2 748 aaPredicted RBP5.37□□□□□ -1.55
TMEM260-210ENST00000556422 KIFAP3Q92845 792 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 ELMO3Q96BJ8 720 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 ARHGEF26Q96DR7 871 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 VPS50Q96JG6 964 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 CCDC43Q96MW1 224 aaKnown RBP5.37□□□□□ -1.55
TMEM260-210ENST00000556422 PSKH2Q96QS6 385 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 PCYT2Q99447 389 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 HAPLN2Q9GZV7 340 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 PCDH18Q9HCL0 1135 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 COG5Q9UP83 839 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 COQ4Q9Y3A0 265 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 ZSWIM8A7E2V4 1837 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 CCDC85CA6NKD9 419 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 CCDC169A6NNP5 214 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 ZW10O43264 779 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 ZEB2O60315 1214 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 PSAPP07602 524 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 GLI1P08151 1106 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 H2AFZP0C0S5 128 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 SUPT20HL2P0C7V6 817 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 TNFAIP3P21580 790 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 CASP2P42575 452 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 ALDH5A1P51649 535 aaPredicted RBP5.37□□□□□ -1.55
TMEM260-210ENST00000556422 GJA9P57773 515 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 RTP1P59025 263 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 SUPT20HL1Q3ZLR7 823 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 CFAP221Q4G0U5 840 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 SPDYCQ5MJ68 293 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 DCAF12L1Q5VU92 463 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 CORO6Q6QEF8 472 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 H2AFVQ71UI9 128 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 CYFIP1Q7L576 1253 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 NT5DC3Q86UY8 548 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 ESX1Q8N693 406 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 DNERQ8NFT8 737 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 EPS8L3Q8TE67 593 aaKnown RBP5.37□□□□□ -1.55
TMEM260-210ENST00000556422 EPS8L1Q8TE68 723 aa5.37□□□□□ -1.55
TMEM260-210ENST00000556422 HES6Q96HZ4 224 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms