RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 CDC23Q9UJX2 597 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 ADAM29Q9UKF5 820 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 NIP7Q9Y221 180 aaKnown RBP eCLIP4.85□□□□□ -1.63
ATXN3-241ENST00000556374 PDS5AQ29RF7 1337 aaKnown RBP4.85□□□□□ -1.63
ATXN3-241ENST00000556374 MYH1P12882 1939 aa4.85□□□□□ -1.63
ATXN3-241ENST00000556374 POLR2AP24928 1970 aaKnown RBP4.85□□□□□ -1.63
ATXN3-241ENST00000556374 BRCA2P51587 3418 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 ZNF804BA4D1E1 1349 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 NPEPPSL1A6NEC2 478 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 LGALS16A8MUM7 142 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 H7C1D1 291 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 LAD1O00515 517 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 TBX1O43435 398 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 PRKAB2O43741 272 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 USO1O60763 962 aaKnown RBP4.84□□□□□ -1.63
ATXN3-241ENST00000556374 PRDM1O75626 825 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 SEC31AO94979 1220 aaKnown RBP4.84□□□□□ -1.63
ATXN3-241ENST00000556374 PLEKHA8P1O95397 391 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 RPN1P04843 607 aaKnown RBP4.84□□□□□ -1.63
ATXN3-241ENST00000556374 FGRP09769 529 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 CASP14P31944 242 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 KRT9P35527 623 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 UBA7P41226 1012 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 STAT5AP42229 794 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 EPS15P42566 896 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 MTIF2P46199 727 aaKnown RBP4.84□□□□□ -1.63
ATXN3-241ENST00000556374 LMAN1P49257 510 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 AMPD3Q01432 767 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 ARID5AQ03989 594 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 GRIN1Q05586 938 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 KRT31Q15323 416 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 SEC23AQ15436 765 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 SPA17Q15506 151 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 PFKFB3Q16875 520 aaPredicted RBP4.84□□□□□ -1.63
ATXN3-241ENST00000556374 LONRF2Q1L5Z9 754 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 KIZQ2M2Z5 673 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 TMEM266Q2M3C6 531 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 SLC10A6Q3KNW5 377 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 TCP11X2Q5H9J9 407 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 MRM1Q6IN84 353 aaKnown RBP4.84□□□□□ -1.63
ATXN3-241ENST00000556374 DENND5AQ6IQ26 1287 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 PRR5LQ6MZQ0 368 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 PIK3AP1Q6ZUJ8 805 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 RSRC2Q7L4I2 434 aaKnown RBP4.84□□□□□ -1.63
ATXN3-241ENST00000556374 RASGRP2Q7LDG7 609 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 CIR1Q86X95 450 aaPredicted RBP4.84□□□□□ -1.63
ATXN3-241ENST00000556374 CERS3Q8IU89 383 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 BLIDQ8IZY5 108 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 ENAHQ8N8S7 591 aaPredicted RBP4.84□□□□□ -1.63
ATXN3-241ENST00000556374 SPATA20Q8TB22 786 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 GOLGA5Q8TBA6 731 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 FAM71BQ8TC56 605 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 HNRNPLLQ8WVV9 542 aaKnown RBP4.84□□□□□ -1.63
ATXN3-241ENST00000556374 EXOC4Q96A65 974 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 JAKMIP2Q96AA8 810 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 EPSTI1Q96J88 318 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 CDK5RAP3Q96JB5 506 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 ALS2CR12Q96Q35 445 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 WDR24Q96S15 920 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 RUFY1Q96T51 708 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 LZTS2Q9BRK4 669 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 CRACR2AQ9BSW2 395 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 PARD6BQ9BYG5 372 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 RAB34Q9BZG1 259 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 ANKRD2Q9GZV1 360 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 FAM107BQ9H098 131 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 VPS16Q9H269 839 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 DEF6Q9H4E7 631 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 THAP9Q9H5L6 903 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 HAUS4Q9H6D7 363 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 ZSWIM4Q9H7M6 989 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 MRPL44Q9H9J2 332 aaKnown RBP4.84□□□□□ -1.63
ATXN3-241ENST00000556374 MED4Q9NPJ6 270 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 ATP8A2Q9NTI2 1148 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 VPS18Q9P253 973 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 SEC63Q9UGP8 760 aaKnown RBP4.84□□□□□ -1.63
ATXN3-241ENST00000556374 SRRDQ9UH36 339 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 HDAC9Q9UKV0 1011 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 MYO6Q9UM54 1294 aa4.84□□□□□ -1.63
ATXN3-241ENST00000556374 RANBP2P49792 3224 aaKnown RBP4.83□□□□□ -1.64
ATXN3-241ENST00000556374 XDHP47989 1333 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 A0A1W2PQU0 124 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 UNCXA6NJT0 531 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 PATE3B3GLJ2 98 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 CYR61O00622 381 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 ORC4O43929 436 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 NTSR2O95665 410 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 BAG3O95817 575 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 GYPCP04921 128 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 ENO2P09104 434 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-241ENST00000556374 RHOXF2BP0C7M4 288 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 SRGNP10124 158 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 FGFR1P11362 822 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 TRIM21P19474 475 aaKnown RBP4.83□□□□□ -1.64
ATXN3-241ENST00000556374 ETFBP38117 255 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 GYG1P46976 350 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 DNM2P50570 870 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 EPHA5P54756 1037 aa4.83□□□□□ -1.64
ATXN3-241ENST00000556374 MLLT6P55198 1093 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-241ENST00000556374 SPIRE1Q08AE8 756 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms