RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 TMEM119Q4V9L6 283 aa16.72■□□□□ 0.27
SUPT16H-205ENST00000556217 SLC39A12Q504Y0 691 aa16.72■□□□□ 0.27
SUPT16H-205ENST00000556217 ARSHQ5FYA8 562 aa16.72■□□□□ 0.27
SUPT16H-205ENST00000556217 C9orf57Q5W0N0 161 aa16.72■□□□□ 0.27
SUPT16H-205ENST00000556217 ARL6IP4Q66PJ3 421 aaKnown RBP16.72■□□□□ 0.27
SUPT16H-205ENST00000556217 THEM5Q8N1Q8 247 aa16.72■□□□□ 0.27
SUPT16H-205ENST00000556217 MYCT1Q8N699 235 aa16.72■□□□□ 0.27
SUPT16H-205ENST00000556217 TMEM209Q96SK2 561 aa16.72■□□□□ 0.27
SUPT16H-205ENST00000556217 REEP2Q9BRK0 252 aa16.72■□□□□ 0.27
SUPT16H-205ENST00000556217 SCN1AP35498 2009 aa16.72■□□□□ 0.27
SUPT16H-205ENST00000556217 SDK1Q7Z5N4 2213 aa16.72■□□□□ 0.27
SUPT16H-205ENST00000556217 PIRO00625 290 aa16.71■□□□□ 0.27
SUPT16H-205ENST00000556217 GDF9O60383 454 aa16.71■□□□□ 0.27
SUPT16H-205ENST00000556217 ATG13O75143 517 aa16.71■□□□□ 0.27
SUPT16H-205ENST00000556217 PRAMEF12O95522 483 aa16.71■□□□□ 0.27
SUPT16H-205ENST00000556217 PROS1P07225 676 aa16.71■□□□□ 0.27
SUPT16H-205ENST00000556217 CYP4F8P98187 520 aa16.71■□□□□ 0.27
SUPT16H-205ENST00000556217 TNK2Q07912 1038 aa16.71■□□□□ 0.27
SUPT16H-205ENST00000556217 AASDHQ4L235 1098 aaPredicted RBP16.71■□□□□ 0.27
SUPT16H-205ENST00000556217 WDR44Q5JSH3 913 aa16.71■□□□□ 0.27
SUPT16H-205ENST00000556217 GPBP1Q86WP2 473 aa16.71■□□□□ 0.27
SUPT16H-205ENST00000556217 OR10T2Q8NGX3 314 aa16.71■□□□□ 0.27
SUPT16H-205ENST00000556217 CALML4Q96GE6 196 aa16.71■□□□□ 0.27
SUPT16H-205ENST00000556217 LOXL4Q96JB6 756 aa16.71■□□□□ 0.27
SUPT16H-205ENST00000556217 AK8Q96MA6 479 aa16.71■□□□□ 0.27
SUPT16H-205ENST00000556217 LPIN3Q9BQK8 851 aa16.71■□□□□ 0.27
SUPT16H-205ENST00000556217 ZCWPW1Q9H0M4 648 aa16.71■□□□□ 0.27
SUPT16H-205ENST00000556217 PARVGQ9HBI0 331 aa16.71■□□□□ 0.27
SUPT16H-205ENST00000556217 CPSF3Q9UKF6 684 aaKnown RBP16.71■□□□□ 0.27
SUPT16H-205ENST00000556217 CCDC163A0A0D9SF12 145 aa16.7■□□□□ 0.26
SUPT16H-205ENST00000556217 TRAK2O60296 914 aa16.7■□□□□ 0.26
SUPT16H-205ENST00000556217 KRT18P05783 430 aaKnown RBP16.7■□□□□ 0.26
SUPT16H-205ENST00000556217 NFICP08651 508 aa16.7■□□□□ 0.26
SUPT16H-205ENST00000556217 ATF6P18850 670 aa16.7■□□□□ 0.26
SUPT16H-205ENST00000556217 AVPR1AP37288 418 aa16.7■□□□□ 0.26
SUPT16H-205ENST00000556217 AMPD2Q01433 879 aa16.7■□□□□ 0.26
SUPT16H-205ENST00000556217 GRSF1Q12849 480 aaKnown RBP eCLIP16.7■□□□□ 0.26
SUPT16H-205ENST00000556217 CACNA2D4Q7Z3S7 1137 aa16.7■□□□□ 0.26
SUPT16H-205ENST00000556217 CMTM8Q8IZV2 173 aa16.7■□□□□ 0.26
SUPT16H-205ENST00000556217 C12orf50Q8NA57 414 aaPredicted RBP16.7■□□□□ 0.26
SUPT16H-205ENST00000556217 SPPL2BQ8TCT7 592 aa16.7■□□□□ 0.26
SUPT16H-205ENST00000556217 ASB7Q9H672 318 aa16.7■□□□□ 0.26
SUPT16H-205ENST00000556217 C2orf42Q9NWW7 574 aa16.7■□□□□ 0.26
SUPT16H-205ENST00000556217 ZZEF1O43149 2961 aa16.7■□□□□ 0.26
SUPT16H-205ENST00000556217 ANO9A1A5B4 782 aa16.69■□□□□ 0.26
SUPT16H-205ENST00000556217 CYB561D2O14569 222 aa16.69■□□□□ 0.26
SUPT16H-205ENST00000556217 TBCAO75347 108 aaKnown RBP16.69■□□□□ 0.26
SUPT16H-205ENST00000556217 RPP40O75818 363 aaKnown RBP16.69■□□□□ 0.26
SUPT16H-205ENST00000556217 DDX6P26196 483 aaKnown RBP eCLIP16.69■□□□□ 0.26
SUPT16H-205ENST00000556217 UBA7P41226 1012 aa16.69■□□□□ 0.26
SUPT16H-205ENST00000556217 TAF6P49848 677 aa16.69■□□□□ 0.26
SUPT16H-205ENST00000556217 ZNF131P52739 623 aa16.69■□□□□ 0.26
SUPT16H-205ENST00000556217 LIMK1P53667 647 aa16.69■□□□□ 0.26
SUPT16H-205ENST00000556217 DHX8Q14562 1220 aaKnown RBP16.69■□□□□ 0.26
SUPT16H-205ENST00000556217 SLFN12LQ6IEE8 588 aa16.69■□□□□ 0.26
SUPT16H-205ENST00000556217 GAB3Q8WWW8 586 aa16.69■□□□□ 0.26
SUPT16H-205ENST00000556217 EXOC4Q96A65 974 aa16.69■□□□□ 0.26
SUPT16H-205ENST00000556217 PYM1Q9BRP8 204 aaKnown RBP16.69■□□□□ 0.26
SUPT16H-205ENST00000556217 SLC46A2Q9BY10 475 aa16.69■□□□□ 0.26
SUPT16H-205ENST00000556217 ZHX3Q9H4I2 956 aa16.69■□□□□ 0.26
SUPT16H-205ENST00000556217 IL21Q9HBE4 155 aa16.69■□□□□ 0.26
SUPT16H-205ENST00000556217 GKN1Q9NS71 199 aa16.69■□□□□ 0.26
SUPT16H-205ENST00000556217 SLC8A2Q9UPR5 921 aa16.69■□□□□ 0.26
SUPT16H-205ENST00000556217 C2CD2Q9Y426 696 aa16.69■□□□□ 0.26
SUPT16H-205ENST00000556217 ATG2BQ96BY7 2078 aa16.69■□□□□ 0.26
SUPT16H-205ENST00000556217 SOBPA7XYQ1 873 aa16.68■□□□□ 0.26
SUPT16H-205ENST00000556217 H3BQV1 296 aa16.68■□□□□ 0.26
SUPT16H-205ENST00000556217 AXIN1O15169 862 aa16.68■□□□□ 0.26
SUPT16H-205ENST00000556217 EXTL3O43909 919 aa16.68■□□□□ 0.26
SUPT16H-205ENST00000556217 CCDC192P0DO97 292 aa16.68■□□□□ 0.26
SUPT16H-205ENST00000556217 BFSP1Q12934 665 aa16.68■□□□□ 0.26
SUPT16H-205ENST00000556217 RUNX3Q13761 415 aa16.68■□□□□ 0.26
SUPT16H-205ENST00000556217 TMEM196Q5HYL7 178 aa16.68■□□□□ 0.26
SUPT16H-205ENST00000556217 ADALQ6DHV7 355 aa16.68■□□□□ 0.26
SUPT16H-205ENST00000556217 CC2D1AQ6P1N0 951 aaPredicted RBP16.68■□□□□ 0.26
SUPT16H-205ENST00000556217 DCP1BQ8IZD4 617 aaKnown RBP16.68■□□□□ 0.26
SUPT16H-205ENST00000556217 RASSF8Q8NHQ8 419 aa16.68■□□□□ 0.26
SUPT16H-205ENST00000556217 GIPC2Q8TF65 315 aa16.68■□□□□ 0.26
SUPT16H-205ENST00000556217 SMG9Q9H0W8 520 aaKnown RBP16.68■□□□□ 0.26
SUPT16H-205ENST00000556217 ARRDC1-AS1Q9H2J1 176 aa16.68■□□□□ 0.26
SUPT16H-205ENST00000556217 KIF9Q9HAQ2 790 aa16.68■□□□□ 0.26
SUPT16H-205ENST00000556217 DPP3Q9NY33 737 aa16.68■□□□□ 0.26
SUPT16H-205ENST00000556217 ABI2Q9NYB9 513 aaPredicted RBP16.68■□□□□ 0.26
SUPT16H-205ENST00000556217 OBSL1O75147 1896 aa16.67■□□□□ 0.26
SUPT16H-205ENST00000556217 AKAP3O75969 853 aa16.67■□□□□ 0.26
SUPT16H-205ENST00000556217 EPN2O95208 641 aa16.67■□□□□ 0.26
SUPT16H-205ENST00000556217 ZNF806P0C7X5 589 aa16.67■□□□□ 0.26
SUPT16H-205ENST00000556217 HAPLN1P10915 354 aaPredicted RBP16.67■□□□□ 0.26
SUPT16H-205ENST00000556217 ACOT2P49753 483 aa16.67■□□□□ 0.26
SUPT16H-205ENST00000556217 GTF2BQ00403 316 aa16.67■□□□□ 0.26
SUPT16H-205ENST00000556217 POU5F1Q01860 360 aaKnown RBP16.67■□□□□ 0.26
SUPT16H-205ENST00000556217 SV2CQ496J9 727 aa16.67■□□□□ 0.26
SUPT16H-205ENST00000556217 SLC39A4Q6P5W5 647 aa16.67■□□□□ 0.26
SUPT16H-205ENST00000556217 CAMKK1Q8N5S9 505 aa16.67■□□□□ 0.26
SUPT16H-205ENST00000556217 FAM83CQ9BQN1 747 aa16.67■□□□□ 0.26
SUPT16H-205ENST00000556217 CCSER1Q9C0I3 900 aa16.67■□□□□ 0.26
SUPT16H-205ENST00000556217 PCDHB5Q9Y5E4 795 aa16.67■□□□□ 0.26
SUPT16H-205ENST00000556217 TRDMT1O14717 391 aaKnown RBP16.66■□□□□ 0.26
SUPT16H-205ENST00000556217 TM4SF5O14894 197 aa16.66■□□□□ 0.26
SUPT16H-205ENST00000556217 HOXB3P14651 431 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms