RNA–Protein interactions for RNA: ENST00000555943.1

SUPT16H-204, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2 BASIC

Gene SUPT16H, Length 915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-204ENST00000555943 CDPF1Q6NVV7 123 aa8.33□□□□□ -1.08
SUPT16H-204ENST00000555943 RBM43Q6ZSC3 357 aaKnown RBP8.33□□□□□ -1.08
SUPT16H-204ENST00000555943 ZNF720Q7Z2F6 126 aa8.33□□□□□ -1.08
SUPT16H-204ENST00000555943 HAUS6Q7Z4H7 955 aa8.33□□□□□ -1.08
SUPT16H-204ENST00000555943 SRGAP1Q7Z6B7 1085 aa8.33□□□□□ -1.08
SUPT16H-204ENST00000555943 UBE3DQ7Z6J8 389 aa8.33□□□□□ -1.08
SUPT16H-204ENST00000555943 RPAINQ86UA6 219 aa8.33□□□□□ -1.08
SUPT16H-204ENST00000555943 SYCP3Q8IZU3 236 aa8.33□□□□□ -1.08
SUPT16H-204ENST00000555943 MLKLQ8NB16 471 aa8.33□□□□□ -1.08
SUPT16H-204ENST00000555943 SPATA20Q8TB22 786 aa8.33□□□□□ -1.08
SUPT16H-204ENST00000555943 PRUNE2Q8WUY3 3088 aa8.33□□□□□ -1.08
SUPT16H-204ENST00000555943 HERVK_113Q902F9 699 aa8.33□□□□□ -1.08
SUPT16H-204ENST00000555943 HPS3Q969F9 1004 aa8.33□□□□□ -1.08
SUPT16H-204ENST00000555943 TIFAQ96CG3 184 aa8.33□□□□□ -1.08
SUPT16H-204ENST00000555943 BICD1Q96G01 975 aa8.33□□□□□ -1.08
SUPT16H-204ENST00000555943 FDXACB1Q9BRP7 624 aaPredicted RBP8.33□□□□□ -1.08
SUPT16H-204ENST00000555943 NTPCRQ9BSD7 190 aaKnown RBP8.33□□□□□ -1.08
SUPT16H-204ENST00000555943 SRRTQ9BXP5 876 aaKnown RBP8.33□□□□□ -1.08
SUPT16H-204ENST00000555943 CELF4Q9BZC1 486 aaKnown RBP8.33□□□□□ -1.08
SUPT16H-204ENST00000555943 PIDD1Q9HB75 910 aa8.33□□□□□ -1.08
SUPT16H-204ENST00000555943 ANO10Q9NW15 660 aa8.33□□□□□ -1.08
SUPT16H-204ENST00000555943 REV1Q9UBZ9 1251 aa8.33□□□□□ -1.08
SUPT16H-204ENST00000555943 STRIP2Q9ULQ0 834 aa8.33□□□□□ -1.08
SUPT16H-204ENST00000555943 EXOC7Q9UPT5 735 aa8.33□□□□□ -1.08
SUPT16H-204ENST00000555943 TRPV2Q9Y5S1 764 aa8.33□□□□□ -1.08
SUPT16H-204ENST00000555943 CDY2AQ9Y6F7 541 aa8.33□□□□□ -1.08
SUPT16H-204ENST00000555943 MYH9P35579 1960 aaKnown RBP8.33□□□□□ -1.08
SUPT16H-204ENST00000555943 VCANP13611 3396 aa8.33□□□□□ -1.08
SUPT16H-204ENST00000555943 PSMA7O14818 248 aa8.32□□□□□ -1.08
SUPT16H-204ENST00000555943 EIF3DO15371 548 aaKnown RBP eCLIP8.32□□□□□ -1.08
SUPT16H-204ENST00000555943 RNGTTO60942 597 aaKnown RBP8.32□□□□□ -1.08
SUPT16H-204ENST00000555943 GPR32O75388 356 aa8.32□□□□□ -1.08
SUPT16H-204ENST00000555943 ERLIN2O94905 339 aa8.32□□□□□ -1.08
SUPT16H-204ENST00000555943 PRPF6O94906 941 aaKnown RBP8.32□□□□□ -1.08
SUPT16H-204ENST00000555943 MYBP10242 640 aa8.32□□□□□ -1.08
SUPT16H-204ENST00000555943 CKBP12277 381 aa8.32□□□□□ -1.08
SUPT16H-204ENST00000555943 SFPQP23246 707 aaKnown RBP eCLIP8.32□□□□□ -1.08
SUPT16H-204ENST00000555943 RFC2P35250 354 aa8.32□□□□□ -1.08
SUPT16H-204ENST00000555943 NCKAP1LP55160 1127 aa8.32□□□□□ -1.08
SUPT16H-204ENST00000555943 PTENP60484 403 aa8.32□□□□□ -1.08
SUPT16H-204ENST00000555943 GTF2BQ00403 316 aa8.32□□□□□ -1.08
SUPT16H-204ENST00000555943 STX1AQ16623 288 aa8.32□□□□□ -1.08
SUPT16H-204ENST00000555943 MAPK6Q16659 721 aa8.32□□□□□ -1.08
SUPT16H-204ENST00000555943 ZNF618Q5T7W0 954 aa8.32□□□□□ -1.08
SUPT16H-204ENST00000555943 ZNF365Q70YC5 407 aa8.32□□□□□ -1.08
SUPT16H-204ENST00000555943 C16orf59Q7L2K0 433 aa8.32□□□□□ -1.08
SUPT16H-204ENST00000555943 MYOCDQ8IZQ8 938 aa8.32□□□□□ -1.08
SUPT16H-204ENST00000555943 ARMC10Q8N2F6 343 aa8.32□□□□□ -1.08
SUPT16H-204ENST00000555943 TMEM161BQ8NDZ6 487 aa8.32□□□□□ -1.08
SUPT16H-204ENST00000555943 MYLIPQ8WY64 445 aa8.32□□□□□ -1.08
SUPT16H-204ENST00000555943 UTP4Q969X6 686 aaKnown RBP8.32□□□□□ -1.08
SUPT16H-204ENST00000555943 ISL2Q96A47 359 aa8.32□□□□□ -1.08
SUPT16H-204ENST00000555943 HVCN1Q96D96 273 aa8.32□□□□□ -1.08
SUPT16H-204ENST00000555943 ACCSQ96QU6 501 aa8.32□□□□□ -1.08
SUPT16H-204ENST00000555943 KIFC3Q9BVG8 833 aa8.32□□□□□ -1.08
SUPT16H-204ENST00000555943 SSBP4Q9BWG4 385 aaPredicted RBP8.32□□□□□ -1.08
SUPT16H-204ENST00000555943 NFKBIZQ9BYH8 718 aa8.32□□□□□ -1.08
SUPT16H-204ENST00000555943 NAT10Q9H0A0 1025 aaKnown RBP8.32□□□□□ -1.08
SUPT16H-204ENST00000555943 ACSS3Q9H6R3 686 aa8.32□□□□□ -1.08
SUPT16H-204ENST00000555943 TMEM206Q9H813 350 aa8.32□□□□□ -1.08
SUPT16H-204ENST00000555943 FBRSQ9HAH7 460 aa8.32□□□□□ -1.08
SUPT16H-204ENST00000555943 MSRAQ9UJ68 235 aa8.32□□□□□ -1.08
SUPT16H-204ENST00000555943 MAPK8IP1Q9UQF2 711 aa8.32□□□□□ -1.08
SUPT16H-204ENST00000555943 GDAQ9Y2T3 454 aa8.32□□□□□ -1.08
SUPT16H-204ENST00000555943 UBE4BO95155 1302 aa8.31□□□□□ -1.08
SUPT16H-204ENST00000555943 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.31□□□□□ -1.08
SUPT16H-204ENST00000555943 BICDL2A1A5D9 508 aa8.31□□□□□ -1.08
SUPT16H-204ENST00000555943 RPS6KA5O75582 802 aa8.31□□□□□ -1.08
SUPT16H-204ENST00000555943 PARNO95453 639 aaKnown RBP8.31□□□□□ -1.08
SUPT16H-204ENST00000555943 CHRNA1P02708 482 aa8.31□□□□□ -1.08
SUPT16H-204ENST00000555943 PRKCBP05771 671 aa8.31□□□□□ -1.08
SUPT16H-204ENST00000555943 ACTN1P12814 892 aa8.31□□□□□ -1.08
SUPT16H-204ENST00000555943 RAB6AP20340 208 aa8.31□□□□□ -1.08
SUPT16H-204ENST00000555943 CYP2C18P33260 490 aa8.31□□□□□ -1.08
SUPT16H-204ENST00000555943 PRCPP42785 496 aa8.31□□□□□ -1.08
SUPT16H-204ENST00000555943 MATR3P43243 847 aaKnown RBP eCLIP8.31□□□□□ -1.08
SUPT16H-204ENST00000555943 LIG4P49917 911 aa8.31□□□□□ -1.08
SUPT16H-204ENST00000555943 PRPF4BQ13523 1007 aaKnown RBP8.31□□□□□ -1.08
SUPT16H-204ENST00000555943 PCBP1Q15365 356 aaKnown RBP eCLIP8.31□□□□□ -1.08
SUPT16H-204ENST00000555943 KNOP1Q1ED39 458 aaKnown RBP8.31□□□□□ -1.08
SUPT16H-204ENST00000555943 UVSSAQ2YD98 709 aa8.31□□□□□ -1.08
SUPT16H-204ENST00000555943 ZC2HC1CQ53FD0 456 aaPredicted RBP8.31□□□□□ -1.08
SUPT16H-204ENST00000555943 SGO2Q562F6 1265 aa8.31□□□□□ -1.08
SUPT16H-204ENST00000555943 TMEM201Q5SNT2 666 aa8.31□□□□□ -1.08
SUPT16H-204ENST00000555943 FBXW10Q5XX13 1052 aa8.31□□□□□ -1.08
SUPT16H-204ENST00000555943 CDCA2Q69YH5 1023 aaPredicted RBP8.31□□□□□ -1.08
SUPT16H-204ENST00000555943 KLHL10Q6JEL2 608 aa8.31□□□□□ -1.08
SUPT16H-204ENST00000555943 LRRC8DQ7L1W4 858 aa8.31□□□□□ -1.08
SUPT16H-204ENST00000555943 CATSPER4Q7RTX7 472 aa8.31□□□□□ -1.08
SUPT16H-204ENST00000555943 NELFCDQ8IXH7 590 aa8.31□□□□□ -1.08
SUPT16H-204ENST00000555943 SMYD4Q8IYR2 804 aaPredicted RBP8.31□□□□□ -1.08
SUPT16H-204ENST00000555943 GUF1Q8N442 669 aaKnown RBP8.31□□□□□ -1.08
SUPT16H-204ENST00000555943 USP38Q8NB14 1042 aa8.31□□□□□ -1.08
SUPT16H-204ENST00000555943 KIAA0895Q8NCT3 520 aa8.31□□□□□ -1.08
SUPT16H-204ENST00000555943 ZNF507Q8TCN5 953 aa8.31□□□□□ -1.08
SUPT16H-204ENST00000555943 CPLX3Q8WVH0 158 aa8.31□□□□□ -1.08
SUPT16H-204ENST00000555943 DHX38Q92620 1227 aaKnown RBP8.31□□□□□ -1.08
SUPT16H-204ENST00000555943 ACSF2Q96CM8 615 aaPredicted RBP8.31□□□□□ -1.08
SUPT16H-204ENST00000555943 SHDQ96IW2 340 aa8.31□□□□□ -1.08
SUPT16H-204ENST00000555943 CTAGE1Q96RT6 745 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms