RNA–Protein interactions for RNA: ENST00000555941.1

LRP1-209, Transcript of LDL receptor related protein 1, humanhuman

TSL 3

Gene LRP1, Length 499 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-209ENST00000555941 SPEM1Q8N4L4 309 aa12.41□□□□□ -0.42
LRP1-209ENST00000555941 TTC9BQ8N6N2 239 aa12.41□□□□□ -0.42
LRP1-209ENST00000555941 SPATA18Q8TC71 538 aa12.41□□□□□ -0.42
LRP1-209ENST00000555941 RSPRY1Q96DX4 576 aa12.41□□□□□ -0.42
LRP1-209ENST00000555941 TMEM209Q96SK2 561 aa12.41□□□□□ -0.42
LRP1-209ENST00000555941 SEPT5Q99719 369 aaPredicted RBP12.41□□□□□ -0.42
LRP1-209ENST00000555941 MKNK1Q9BUB5 465 aa12.41□□□□□ -0.42
LRP1-209ENST00000555941 ZSCAN16Q9H4T2 348 aaPredicted RBP12.41□□□□□ -0.42
LRP1-209ENST00000555941 TMEM206Q9H813 350 aa12.41□□□□□ -0.42
LRP1-209ENST00000555941 THG1LQ9NWX6 298 aaKnown RBP12.41□□□□□ -0.42
LRP1-209ENST00000555941 FRMD3A2A2Y4 597 aa12.4□□□□□ -0.42
LRP1-209ENST00000555941 MYBPHLA2RUH7 354 aa12.4□□□□□ -0.42
LRP1-209ENST00000555941 PAPSS2O95340 614 aaPredicted RBP12.4□□□□□ -0.42
LRP1-209ENST00000555941 GCNT3O95395 438 aa12.4□□□□□ -0.42
LRP1-209ENST00000555941 ATF6P18850 670 aa12.4□□□□□ -0.42
LRP1-209ENST00000555941 DDX6P26196 483 aaKnown RBP eCLIP12.4□□□□□ -0.42
LRP1-209ENST00000555941 STAT6P42226 847 aa12.4□□□□□ -0.42
LRP1-209ENST00000555941 CXCL12P48061 93 aa12.4□□□□□ -0.42
LRP1-209ENST00000555941 TSPY1Q01534 308 aa12.4□□□□□ -0.42
LRP1-209ENST00000555941 STXBP4Q6ZWJ1 553 aa12.4□□□□□ -0.42
LRP1-209ENST00000555941 LRRTM3Q86VH5 581 aa12.4□□□□□ -0.42
LRP1-209ENST00000555941 BRSK2Q8IWQ3 736 aa12.4□□□□□ -0.42
LRP1-209ENST00000555941 EFCAB13Q8IY85 973 aa12.4□□□□□ -0.42
LRP1-209ENST00000555941 SYCP3Q8IZU3 236 aa12.4□□□□□ -0.42
LRP1-209ENST00000555941 TMEM86AQ8N2M4 240 aa12.4□□□□□ -0.42
LRP1-209ENST00000555941 SYNPOQ8N3V7 929 aa12.4□□□□□ -0.42
LRP1-209ENST00000555941 CELF5Q8N6W0 485 aaKnown RBP12.4□□□□□ -0.42
LRP1-209ENST00000555941 LRRC52Q8N7C0 313 aa12.4□□□□□ -0.42
LRP1-209ENST00000555941 BPIFB1Q8TDL5 484 aa12.4□□□□□ -0.42
LRP1-209ENST00000555941 LEO1Q8WVC0 666 aaPredicted RBP12.4□□□□□ -0.42
LRP1-209ENST00000555941 RMDN1Q96DB5 314 aa12.4□□□□□ -0.42
LRP1-209ENST00000555941 ACBD6Q9BR61 282 aa12.4□□□□□ -0.42
LRP1-209ENST00000555941 FAM213AQ9BRX8 229 aa12.4□□□□□ -0.42
LRP1-209ENST00000555941 LRRC27Q9C0I9 530 aa12.4□□□□□ -0.42
LRP1-209ENST00000555941 IL21Q9HBE4 155 aa12.4□□□□□ -0.42
LRP1-209ENST00000555941 ABCB6Q9NP58 842 aa12.4□□□□□ -0.42
LRP1-209ENST00000555941 DLL3Q9NYJ7 618 aa12.4□□□□□ -0.42
LRP1-209ENST00000555941 SMG5Q9UPR3 1016 aaKnown RBP12.4□□□□□ -0.42
LRP1-209ENST00000555941 PCDHB5Q9Y5E4 795 aa12.4□□□□□ -0.42
LRP1-209ENST00000555941 DCHS1Q96JQ0 3298 aa12.4□□□□□ -0.42
LRP1-209ENST00000555941 CEP250Q9BV73 2442 aa12.4□□□□□ -0.42
LRP1-209ENST00000555941 GPR179Q6PRD1 2367 aa12.4□□□□□ -0.43
LRP1-209ENST00000555941 NCANO14594 1321 aa12.39□□□□□ -0.43
LRP1-209ENST00000555941 SPECC1L-ADORA2AF8WAN1 911 aa12.39□□□□□ -0.43
LRP1-209ENST00000555941 EXTL3O43909 919 aa12.39□□□□□ -0.43
LRP1-209ENST00000555941 HUS1O60921 280 aa12.39□□□□□ -0.43
LRP1-209ENST00000555941 SOAT2O75908 522 aa12.39□□□□□ -0.43
LRP1-209ENST00000555941 IDEP14735 1019 aa12.39□□□□□ -0.43
LRP1-209ENST00000555941 CTHP32929 405 aa12.39□□□□□ -0.43
LRP1-209ENST00000555941 CNR2P34972 360 aa12.39□□□□□ -0.43
LRP1-209ENST00000555941 TFAMQ00059 246 aaKnown RBP12.39□□□□□ -0.43
LRP1-209ENST00000555941 KCNA1Q09470 495 aa12.39□□□□□ -0.43
LRP1-209ENST00000555941 STXBP5Q5T5C0 1151 aa12.39□□□□□ -0.43
LRP1-209ENST00000555941 TSSK4Q6SA08 328 aa12.39□□□□□ -0.43
LRP1-209ENST00000555941 CCDC65Q8IXS2 484 aa12.39□□□□□ -0.43
LRP1-209ENST00000555941 DCLK2Q8N568 766 aa12.39□□□□□ -0.43
LRP1-209ENST00000555941 CLIC6Q96NY7 704 aa12.39□□□□□ -0.43
LRP1-209ENST00000555941 LPIN3Q9BQK8 851 aa12.39□□□□□ -0.43
LRP1-209ENST00000555941 PANK4Q9NVE7 773 aa12.39□□□□□ -0.43
LRP1-209ENST00000555941 GDAP2Q9NXN4 497 aa12.39□□□□□ -0.43
LRP1-209ENST00000555941 RBAKQ9NYW8 714 aaPredicted RBP12.39□□□□□ -0.43
LRP1-209ENST00000555941 ITGA11Q9UKX5 1188 aa12.39□□□□□ -0.43
LRP1-209ENST00000555941 RAB23Q9ULC3 237 aa12.39□□□□□ -0.43
LRP1-209ENST00000555941 SLC38A8A6NNN8 435 aa12.38□□□□□ -0.43
LRP1-209ENST00000555941 PRR5-ARHGAP8B1AHC4 643 aa12.38□□□□□ -0.43
LRP1-209ENST00000555941 CSH1P0DML2 217 aa12.38□□□□□ -0.43
LRP1-209ENST00000555941 CSH2P0DML3 217 aa12.38□□□□□ -0.43
LRP1-209ENST00000555941 POLR2BP30876 1174 aaKnown RBP12.38□□□□□ -0.43
LRP1-209ENST00000555941 HOXA6P31267 233 aa12.38□□□□□ -0.43
LRP1-209ENST00000555941 RPL10AP62906 217 aaKnown RBP12.38□□□□□ -0.43
LRP1-209ENST00000555941 RBP5P82980 135 aa12.38□□□□□ -0.43
LRP1-209ENST00000555941 ARHGAP8P85298 464 aa12.38□□□□□ -0.43
LRP1-209ENST00000555941 AMPD2Q01433 879 aa12.38□□□□□ -0.43
LRP1-209ENST00000555941 MYL7Q01449 175 aa12.38□□□□□ -0.43
LRP1-209ENST00000555941 LMNB2Q03252 620 aa12.38□□□□□ -0.43
LRP1-209ENST00000555941 CEBPZQ03701 1054 aaKnown RBP12.38□□□□□ -0.43
LRP1-209ENST00000555941 SURF1Q15526 300 aa12.38□□□□□ -0.43
LRP1-209ENST00000555941 ITPRIPL2Q3MIP1 535 aa12.38□□□□□ -0.43
LRP1-209ENST00000555941 DGLUCYQ7Z3D6 616 aa12.38□□□□□ -0.43
LRP1-209ENST00000555941 CMTM8Q8IZV2 173 aa12.38□□□□□ -0.43
LRP1-209ENST00000555941 PDCL2Q8N4E4 241 aa12.38□□□□□ -0.43
LRP1-209ENST00000555941 C1orf127Q8N9H9 656 aa12.38□□□□□ -0.43
LRP1-209ENST00000555941 LRRC3BQ96PB8 259 aa12.38□□□□□ -0.43
LRP1-209ENST00000555941 SLC46A2Q9BY10 475 aa12.38□□□□□ -0.43
LRP1-209ENST00000555941 IKZF4Q9H2S9 585 aa12.38□□□□□ -0.43
LRP1-209ENST00000555941 CUEDC2Q9H467 287 aa12.38□□□□□ -0.43
LRP1-209ENST00000555941 KIF9Q9HAQ2 790 aa12.38□□□□□ -0.43
LRP1-209ENST00000555941 ABI2Q9NYB9 513 aaPredicted RBP12.38□□□□□ -0.43
LRP1-209ENST00000555941 TBC1D7Q9P0N9 293 aa12.38□□□□□ -0.43
LRP1-209ENST00000555941 UXTQ9UBK9 157 aaPredicted RBP12.38□□□□□ -0.43
LRP1-209ENST00000555941 GMEB2Q9UKD1 530 aa12.38□□□□□ -0.43
LRP1-209ENST00000555941 AGAP1Q9UPQ3 857 aa12.38□□□□□ -0.43
LRP1-209ENST00000555941 R3HCC1Q9Y3T6 440 aaKnown RBP12.38□□□□□ -0.43
LRP1-209ENST00000555941 DENND4CQ5VZ89 1909 aa12.38□□□□□ -0.43
LRP1-209ENST00000555941 LRP3O75074 770 aa12.37□□□□□ -0.43
LRP1-209ENST00000555941 PRPF40AO75400 957 aaKnown RBP12.37□□□□□ -0.43
LRP1-209ENST00000555941 PRAMEF12O95522 483 aa12.37□□□□□ -0.43
LRP1-209ENST00000555941 F11P03951 625 aa12.37□□□□□ -0.43
LRP1-209ENST00000555941 ITGB3P05106 788 aa12.37□□□□□ -0.43
LRP1-209ENST00000555941 PDIA4P13667 645 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms