RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 KHDC1Q4VXA5 237 aaKnown RBP4.85□□□□□ -1.63
SNX6-204ENST00000555541 CCDC93Q567U6 631 aa4.85□□□□□ -1.63
SNX6-204ENST00000555541 CEP78Q5JTW2 689 aa4.85□□□□□ -1.63
SNX6-204ENST00000555541 MORN5Q5VZ52 161 aa4.85□□□□□ -1.63
SNX6-204ENST00000555541 PGM2L1Q6PCE3 622 aa4.85□□□□□ -1.63
SNX6-204ENST00000555541 AMOTL1Q8IY63 956 aa4.85□□□□□ -1.63
SNX6-204ENST00000555541 FAXDC2Q96IV6 333 aa4.85□□□□□ -1.63
SNX6-204ENST00000555541 VRK1Q99986 396 aaPredicted RBP4.85□□□□□ -1.63
SNX6-204ENST00000555541 ACTRT3Q9BYD9 372 aa4.85□□□□□ -1.63
SNX6-204ENST00000555541 TPSD1Q9BZJ3 242 aa4.85□□□□□ -1.63
SNX6-204ENST00000555541 GPR35Q9HC97 309 aa4.85□□□□□ -1.63
SNX6-204ENST00000555541 NR2E3Q9Y5X4 410 aa4.85□□□□□ -1.63
SNX6-204ENST00000555541 ZNF521Q96K83 1311 aa4.84□□□□□ -1.63
SNX6-204ENST00000555541 CNTNAP2Q9UHC6 1331 aa4.84□□□□□ -1.63
SNX6-204ENST00000555541 TRIAP1O43715 76 aa4.84□□□□□ -1.63
SNX6-204ENST00000555541 FAM163BP0C2L3 166 aa4.84□□□□□ -1.63
SNX6-204ENST00000555541 FXR1P51114 621 aaKnown RBP eCLIP4.84□□□□□ -1.63
SNX6-204ENST00000555541 BOP1Q14137 746 aaKnown RBP4.84□□□□□ -1.63
SNX6-204ENST00000555541 TBCCQ15814 346 aa4.84□□□□□ -1.63
SNX6-204ENST00000555541 CLUL1Q15846 466 aa4.84□□□□□ -1.63
SNX6-204ENST00000555541 VPS53Q5VIR6 699 aa4.84□□□□□ -1.63
SNX6-204ENST00000555541 EGFLAMQ63HQ2 1017 aa4.84□□□□□ -1.63
SNX6-204ENST00000555541 ZNF551Q7Z340 670 aaPredicted RBP4.84□□□□□ -1.63
SNX6-204ENST00000555541 PPP1R32Q7Z5V6 425 aa4.84□□□□□ -1.63
SNX6-204ENST00000555541 YTHDF3Q7Z739 585 aaKnown RBP4.84□□□□□ -1.63
SNX6-204ENST00000555541 PSD4Q8NDX1 1056 aa4.84□□□□□ -1.63
SNX6-204ENST00000555541 SH2D3AQ9BRG2 576 aa4.84□□□□□ -1.63
SNX6-204ENST00000555541 PUS7LQ9H0K6 701 aaKnown RBP4.84□□□□□ -1.63
SNX6-204ENST00000555541 TMX1Q9H3N1 280 aa4.84□□□□□ -1.63
SNX6-204ENST00000555541 ARHGEF3Q9NR81 526 aa4.84□□□□□ -1.63
SNX6-204ENST00000555541 RLIMQ9NVW2 624 aa4.84□□□□□ -1.63
SNX6-204ENST00000555541 PPP6CO00743 305 aa4.83□□□□□ -1.64
SNX6-204ENST00000555541 JTBO76095 146 aa4.83□□□□□ -1.64
SNX6-204ENST00000555541 TOP3BO95985 862 aaKnown RBP4.83□□□□□ -1.64
SNX6-204ENST00000555541 GJB1P08034 283 aa4.83□□□□□ -1.64
SNX6-204ENST00000555541 PDHA1P08559 390 aa4.83□□□□□ -1.64
SNX6-204ENST00000555541 EBLN1P0CF75 366 aa4.83□□□□□ -1.64
SNX6-204ENST00000555541 CYP2C19P33261 490 aa4.83□□□□□ -1.64
SNX6-204ENST00000555541 RBM20Q5T481 1227 aaKnown RBP4.83□□□□□ -1.64
SNX6-204ENST00000555541 AWAT2Q6E213 333 aa4.83□□□□□ -1.64
SNX6-204ENST00000555541 CEP85Q6P2H3 762 aa4.83□□□□□ -1.64
SNX6-204ENST00000555541 GADL1Q6ZQY3 521 aa4.83□□□□□ -1.64
SNX6-204ENST00000555541 FAM90A1Q86YD7 464 aa4.83□□□□□ -1.64
SNX6-204ENST00000555541 KLHDC4Q8TBB5 520 aa4.83□□□□□ -1.64
SNX6-204ENST00000555541 DLL3Q9NYJ7 618 aa4.83□□□□□ -1.64
SNX6-204ENST00000555541 PRRT4C9JH25 899 aa4.82□□□□□ -1.64
SNX6-204ENST00000555541 H0YIZ8 118 aa4.82□□□□□ -1.64
SNX6-204ENST00000555541 CERS1P27544 350 aa4.82□□□□□ -1.64
SNX6-204ENST00000555541 SLC16A1P53985 500 aa4.82□□□□□ -1.64
SNX6-204ENST00000555541 PSMC1P62191 440 aaKnown RBP4.82□□□□□ -1.64
SNX6-204ENST00000555541 PLAC9Q5JTB6 97 aa4.82□□□□□ -1.64
SNX6-204ENST00000555541 SLC18B1Q6NT16 456 aa4.82□□□□□ -1.64
SNX6-204ENST00000555541 SLC4A10Q6U841 1118 aa4.82□□□□□ -1.64
SNX6-204ENST00000555541 DTX2Q86UW9 622 aa4.82□□□□□ -1.64
SNX6-204ENST00000555541 DDX42Q86XP3 938 aaKnown RBP eCLIP4.82□□□□□ -1.64
SNX6-204ENST00000555541 AOPEPQ8N6M6 819 aa4.82□□□□□ -1.64
SNX6-204ENST00000555541 ATL2Q8NHH9 583 aa4.82□□□□□ -1.64
SNX6-204ENST00000555541 FAM136AQ96C01 138 aa4.82□□□□□ -1.64
SNX6-204ENST00000555541 BRD9Q9H8M2 597 aa4.82□□□□□ -1.64
SNX6-204ENST00000555541 MKS1Q9NXB0 559 aa4.82□□□□□ -1.64
SNX6-204ENST00000555541 SLC5A4Q9NY91 659 aa4.82□□□□□ -1.64
SNX6-204ENST00000555541 KLHL33A6NCF5 533 aa4.81□□□□□ -1.64
SNX6-204ENST00000555541 ZNF785A8K8V0 405 aa4.81□□□□□ -1.64
SNX6-204ENST00000555541 PPM1DO15297 605 aa4.81□□□□□ -1.64
SNX6-204ENST00000555541 SOAT2O75908 522 aa4.81□□□□□ -1.64
SNX6-204ENST00000555541 KIF20AO95235 890 aa4.81□□□□□ -1.64
SNX6-204ENST00000555541 CYP2D6P10635 497 aa4.81□□□□□ -1.64
SNX6-204ENST00000555541 PRDX5P30044 214 aa4.81□□□□□ -1.64
SNX6-204ENST00000555541 SP2Q02086 613 aa4.81□□□□□ -1.64
SNX6-204ENST00000555541 KIF22Q14807 665 aa4.81□□□□□ -1.64
SNX6-204ENST00000555541 PCBP2Q15366 365 aaKnown RBP eCLIP4.81□□□□□ -1.64
SNX6-204ENST00000555541 PRAMEF17Q5VTA0 474 aa4.81□□□□□ -1.64
SNX6-204ENST00000555541 PPP4R3AQ6IN85 833 aa4.81□□□□□ -1.64
SNX6-204ENST00000555541 ANKRD16Q6P6B7 361 aa4.81□□□□□ -1.64
SNX6-204ENST00000555541 TBC1D5Q92609 795 aa4.81□□□□□ -1.64
SNX6-204ENST00000555541 TEKT5Q96M29 485 aa4.81□□□□□ -1.64
SNX6-204ENST00000555541 C1orf43Q9BWL3 253 aa4.81□□□□□ -1.64
SNX6-204ENST00000555541 SPRTNQ9H040 489 aaPredicted RBP4.81□□□□□ -1.64
SNX6-204ENST00000555541 SH3BP4Q9P0V3 963 aa4.81□□□□□ -1.64
SNX6-204ENST00000555541 CFAP20Q9Y6A4 193 aaKnown RBP4.81□□□□□ -1.64
SNX6-204ENST00000555541 LRRC14BA6NHZ5 514 aa4.8□□□□□ -1.64
SNX6-204ENST00000555541 CYSRT1A8MQ03 144 aa4.8□□□□□ -1.64
SNX6-204ENST00000555541 CHEK2O96017 543 aa4.8□□□□□ -1.64
SNX6-204ENST00000555541 MT-CO1P00395 513 aa4.8□□□□□ -1.64
SNX6-204ENST00000555541 TUBB4AP04350 444 aa4.8□□□□□ -1.64
SNX6-204ENST00000555541 CHRM3P20309 590 aa4.8□□□□□ -1.64
SNX6-204ENST00000555541 LIPAP38571 399 aa4.8□□□□□ -1.64
SNX6-204ENST00000555541 ZNF135P52742 658 aaPredicted RBP4.8□□□□□ -1.64
SNX6-204ENST00000555541 KRT85P78386 507 aa4.8□□□□□ -1.64
SNX6-204ENST00000555541 KIF23Q02241 960 aaPredicted RBP4.8□□□□□ -1.64
SNX6-204ENST00000555541 AARS2Q5JTZ9 985 aaKnown RBP4.8□□□□□ -1.64
SNX6-204ENST00000555541 SLC9A4Q6AI14 798 aa4.8□□□□□ -1.64
SNX6-204ENST00000555541 MAVSQ7Z434 540 aa4.8□□□□□ -1.64
SNX6-204ENST00000555541 MCM8Q9UJA3 840 aa4.8□□□□□ -1.64
SNX6-204ENST00000555541 PPEF2O14830 753 aa4.79□□□□□ -1.64
SNX6-204ENST00000555541 VPS4BO75351 444 aa4.79□□□□□ -1.64
SNX6-204ENST00000555541 CD6P30203 668 aa4.79□□□□□ -1.64
SNX6-204ENST00000555541 NR4A2P43354 598 aa4.79□□□□□ -1.64
SNX6-204ENST00000555541 RAPGEF1Q13905 1077 aa4.79□□□□□ -1.64
SNX6-204ENST00000555541 ODF1Q14990 250 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms