RNA–Protein interactions for RNA: ENST00000555414.5

APEX1-210, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APEX1, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-210ENST00000555414 PDGFRBP09619 1106 aa12.37□□□□□ -0.43
APEX1-210ENST00000555414 KIF11P52732 1056 aa12.37□□□□□ -0.43
APEX1-210ENST00000555414 SNX16P57768 344 aa12.37□□□□□ -0.43
APEX1-210ENST00000555414 SHHQ15465 462 aa12.37□□□□□ -0.43
APEX1-210ENST00000555414 CNGA2Q16280 664 aa12.37□□□□□ -0.43
APEX1-210ENST00000555414 SLC18A3Q16572 532 aa12.37□□□□□ -0.43
APEX1-210ENST00000555414 E4F1Q66K89 784 aaPredicted RBP12.37□□□□□ -0.43
APEX1-210ENST00000555414 ZNF280DQ6N043 979 aa12.37□□□□□ -0.43
APEX1-210ENST00000555414 CD300LGQ6UXG3 332 aa12.37□□□□□ -0.43
APEX1-210ENST00000555414 ANKS3Q6ZW76 656 aa12.37□□□□□ -0.43
APEX1-210ENST00000555414 ZNF571Q7Z3V5 609 aaPredicted RBP12.37□□□□□ -0.43
APEX1-210ENST00000555414 ACOT1Q86TX2 421 aa12.37□□□□□ -0.43
APEX1-210ENST00000555414 NOP9Q86U38 636 aaKnown RBP12.37□□□□□ -0.43
APEX1-210ENST00000555414 CEP57Q86XR8 500 aa12.37□□□□□ -0.43
APEX1-210ENST00000555414 DCP1BQ8IZD4 617 aaKnown RBP12.37□□□□□ -0.43
APEX1-210ENST00000555414 SLC39A11Q8N1S5 342 aa12.37□□□□□ -0.43
APEX1-210ENST00000555414 SLC4A11Q8NBS3 891 aa12.37□□□□□ -0.43
APEX1-210ENST00000555414 SP7Q8TDD2 431 aaPredicted RBP12.37□□□□□ -0.43
APEX1-210ENST00000555414 WHAMMQ8TF30 809 aa12.37□□□□□ -0.43
APEX1-210ENST00000555414 KBTBD7Q8WVZ9 684 aa12.37□□□□□ -0.43
APEX1-210ENST00000555414 ZNF606Q8WXB4 792 aa12.37□□□□□ -0.43
APEX1-210ENST00000555414 CLP1Q92989 425 aaKnown RBP12.37□□□□□ -0.43
APEX1-210ENST00000555414 NOX5Q96PH1 765 aa12.37□□□□□ -0.43
APEX1-210ENST00000555414 EIF3CQ99613 913 aaKnown RBP12.37□□□□□ -0.43
APEX1-210ENST00000555414 TTPALQ9BTX7 342 aa12.37□□□□□ -0.43
APEX1-210ENST00000555414 PLVAPQ9BX97 442 aa12.37□□□□□ -0.43
APEX1-210ENST00000555414 ELOVL4Q9GZR5 314 aa12.37□□□□□ -0.43
APEX1-210ENST00000555414 KCNF1Q9H3M0 494 aa12.37□□□□□ -0.43
APEX1-210ENST00000555414 NOCTQ9UK39 431 aaKnown RBP12.37□□□□□ -0.43
APEX1-210ENST00000555414 TIMM13Q9Y5L4 95 aaPredicted RBP12.37□□□□□ -0.43
APEX1-210ENST00000555414 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.36□□□□□ -0.43
APEX1-210ENST00000555414 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.36□□□□□ -0.43
APEX1-210ENST00000555414 OR6C75A6NL08 312 aa12.36□□□□□ -0.43
APEX1-210ENST00000555414 NT5C1B-RDH14C9J2C7 533 aa12.36□□□□□ -0.43
APEX1-210ENST00000555414 H0YGN5 161 aa12.36□□□□□ -0.43
APEX1-210ENST00000555414 PLEKP08567 350 aaPredicted RBP12.36□□□□□ -0.43
APEX1-210ENST00000555414 CCDC175P0C221 793 aa12.36□□□□□ -0.43
APEX1-210ENST00000555414 GZMAP12544 262 aa12.36□□□□□ -0.43
APEX1-210ENST00000555414 PTPN1P18031 435 aaKnown RBP12.36□□□□□ -0.43
APEX1-210ENST00000555414 FGFR3P22607 806 aa12.36□□□□□ -0.43
APEX1-210ENST00000555414 TAF3Q5VWG9 929 aa12.36□□□□□ -0.43
APEX1-210ENST00000555414 DDX53Q86TM3 631 aaKnown RBP12.36□□□□□ -0.43
APEX1-210ENST00000555414 GLYCTKQ8IVS8 523 aa12.36□□□□□ -0.43
APEX1-210ENST00000555414 B3GALNT2Q8NCR0 500 aa12.36□□□□□ -0.43
APEX1-210ENST00000555414 TMEM35BQ8NCS4 154 aa12.36□□□□□ -0.43
APEX1-210ENST00000555414 MSANTD4Q8NCY6 345 aa12.36□□□□□ -0.43
APEX1-210ENST00000555414 SAMD11Q96NU1 681 aa12.36□□□□□ -0.43
APEX1-210ENST00000555414 GDF15Q99988 308 aa12.36□□□□□ -0.43
APEX1-210ENST00000555414 SYT15Q9BQS2 421 aa12.36□□□□□ -0.43
APEX1-210ENST00000555414 ZNF518BQ9C0D4 1074 aa12.36□□□□□ -0.43
APEX1-210ENST00000555414 MARCH5Q9NX47 278 aa12.36□□□□□ -0.43
APEX1-210ENST00000555414 PCDHGC3Q9UN70 934 aa12.36□□□□□ -0.43
APEX1-210ENST00000555414 PCDHA11Q9Y5I1 949 aa12.36□□□□□ -0.43
APEX1-210ENST00000555414 ATP8B3O60423 1300 aa12.36□□□□□ -0.43
APEX1-210ENST00000555414 DNAH12Q6ZR08 3092 aa12.35□□□□□ -0.43
APEX1-210ENST00000555414 IGFBP6P24592 240 aaPredicted RBP12.35□□□□□ -0.43
APEX1-210ENST00000555414 BRD2P25440 801 aaKnown RBP12.35□□□□□ -0.43
APEX1-210ENST00000555414 LMO2P25791 158 aa12.35□□□□□ -0.43
APEX1-210ENST00000555414 TKTP29401 623 aaKnown RBP12.35□□□□□ -0.43
APEX1-210ENST00000555414 BMP8BP34820 402 aa12.35□□□□□ -0.43
APEX1-210ENST00000555414 BMPR1AP36894 532 aa12.35□□□□□ -0.43
APEX1-210ENST00000555414 PBX3P40426 434 aa12.35□□□□□ -0.43
APEX1-210ENST00000555414 RGS19P49795 217 aa12.35□□□□□ -0.43
APEX1-210ENST00000555414 CREMQ03060 361 aa12.35□□□□□ -0.43
APEX1-210ENST00000555414 SMARCB1Q12824 385 aa12.35□□□□□ -0.43
APEX1-210ENST00000555414 RAB30Q15771 203 aa12.35□□□□□ -0.43
APEX1-210ENST00000555414 CTXN3Q4LDR2 81 aa12.35□□□□□ -0.43
APEX1-210ENST00000555414 VARS2Q5ST30 1063 aaKnown RBP12.35□□□□□ -0.43
APEX1-210ENST00000555414 C9orf50Q5SZB4 431 aa12.35□□□□□ -0.43
APEX1-210ENST00000555414 CCDC122Q5T0U0 273 aa12.35□□□□□ -0.43
APEX1-210ENST00000555414 ARHGAP17Q68EM7 881 aa12.35□□□□□ -0.43
APEX1-210ENST00000555414 ALKBH5Q6P6C2 394 aaKnown RBP12.35□□□□□ -0.43
APEX1-210ENST00000555414 LCLAT1Q6UWP7 414 aa12.35□□□□□ -0.43
APEX1-210ENST00000555414 RAD9BQ6WBX8 426 aa12.35□□□□□ -0.43
APEX1-210ENST00000555414 C4orf50Q6ZRC1 276 aa12.35□□□□□ -0.43
APEX1-210ENST00000555414 KIAA1328Q86T90 577 aa12.35□□□□□ -0.43
APEX1-210ENST00000555414 GPIHBP1Q8IV16 184 aa12.35□□□□□ -0.43
APEX1-210ENST00000555414 GPR65Q8IYL9 337 aa12.35□□□□□ -0.43
APEX1-210ENST00000555414 DDX1Q92499 740 aaKnown RBP12.35□□□□□ -0.43
APEX1-210ENST00000555414 CYFIP2Q96F07 1278 aa12.35□□□□□ -0.43
APEX1-210ENST00000555414 GPR62Q9BZJ7 368 aa12.35□□□□□ -0.43
APEX1-210ENST00000555414 MIS12Q9H081 205 aa12.35□□□□□ -0.43
APEX1-210ENST00000555414 LHX5Q9H2C1 402 aa12.35□□□□□ -0.43
APEX1-210ENST00000555414 HCSTQ9UBK5 93 aa12.35□□□□□ -0.43
APEX1-210ENST00000555414 MSRAQ9UJ68 235 aa12.35□□□□□ -0.43
APEX1-210ENST00000555414 ZKSCAN5Q9Y2L8 839 aa12.35□□□□□ -0.43
APEX1-210ENST00000555414 A0A087X0T9 212 aa12.34□□□□□ -0.43
APEX1-210ENST00000555414 GOLGA6L9A6NEM1 432 aa12.34□□□□□ -0.43
APEX1-210ENST00000555414 F8W810 466 aa12.34□□□□□ -0.43
APEX1-210ENST00000555414 RTN2O75298 545 aa12.34□□□□□ -0.43
APEX1-210ENST00000555414 FGF18O76093 207 aa12.34□□□□□ -0.43
APEX1-210ENST00000555414 LCA5LO95447 670 aa12.34□□□□□ -0.43
APEX1-210ENST00000555414 SOD2P04179 222 aa12.34□□□□□ -0.43
APEX1-210ENST00000555414 URODP06132 367 aa12.34□□□□□ -0.43
APEX1-210ENST00000555414 RB1P06400 928 aa12.34□□□□□ -0.43
APEX1-210ENST00000555414 MMEP08473 750 aa12.34□□□□□ -0.43
APEX1-210ENST00000555414 FAM228BP0C875 321 aa12.34□□□□□ -0.43
APEX1-210ENST00000555414 MSNP26038 577 aaKnown RBP12.34□□□□□ -0.43
APEX1-210ENST00000555414 MAGEA1P43355 309 aa12.34□□□□□ -0.43
APEX1-210ENST00000555414 NSFP46459 744 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms