RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 CLDN10P78369 228 aa13.33□□□□□ -0.28
TRAPPC6B-205ENST00000555269 ZCWPW2Q504Y3 356 aa13.33□□□□□ -0.28
TRAPPC6B-205ENST00000555269 ZNF658Q5TYW1 1059 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC6B-205ENST00000555269 TDRD10Q5VZ19 366 aaKnown RBP13.33□□□□□ -0.28
TRAPPC6B-205ENST00000555269 LIMS2Q7Z4I7 341 aa13.33□□□□□ -0.28
TRAPPC6B-205ENST00000555269 SLC44A3Q8N4M1 653 aa13.33□□□□□ -0.28
TRAPPC6B-205ENST00000555269 TOP6BLQ8N6T0 577 aa13.33□□□□□ -0.28
TRAPPC6B-205ENST00000555269 GPR152Q8TDT2 470 aa13.33□□□□□ -0.28
TRAPPC6B-205ENST00000555269 MMS19Q96T76 1030 aa13.33□□□□□ -0.28
TRAPPC6B-205ENST00000555269 LPIN3Q9BQK8 851 aa13.33□□□□□ -0.28
TRAPPC6B-205ENST00000555269 DNAJC25Q9H1X3 360 aa13.33□□□□□ -0.28
TRAPPC6B-205ENST00000555269 RMND1Q9NWS8 449 aa13.33□□□□□ -0.28
TRAPPC6B-205ENST00000555269 DDX43Q9NXZ2 648 aaKnown RBP13.33□□□□□ -0.28
TRAPPC6B-205ENST00000555269 MAN1B1Q9UKM7 699 aa13.33□□□□□ -0.28
TRAPPC6B-205ENST00000555269 GTF3C4Q9UKN8 822 aa13.33□□□□□ -0.28
TRAPPC6B-205ENST00000555269 CDH7Q9ULB5 785 aa13.33□□□□□ -0.28
TRAPPC6B-205ENST00000555269 FRMD4BQ9Y2L6 1034 aa13.33□□□□□ -0.28
TRAPPC6B-205ENST00000555269 MRPS23Q9Y3D9 190 aaKnown RBP13.33□□□□□ -0.28
TRAPPC6B-205ENST00000555269 YIPF1Q9Y548 306 aa13.33□□□□□ -0.28
TRAPPC6B-205ENST00000555269 TMEM221A6NGB7 291 aa13.32□□□□□ -0.28
TRAPPC6B-205ENST00000555269 M0R296 226 aa13.32□□□□□ -0.28
TRAPPC6B-205ENST00000555269 GABRDO14764 452 aa13.32□□□□□ -0.28
TRAPPC6B-205ENST00000555269 NARSO43776 548 aaKnown RBP13.32□□□□□ -0.28
TRAPPC6B-205ENST00000555269 KINO60870 393 aaKnown RBP13.32□□□□□ -0.28
TRAPPC6B-205ENST00000555269 VNN1O95497 513 aa13.32□□□□□ -0.28
TRAPPC6B-205ENST00000555269 MYL4P12829 197 aa13.32□□□□□ -0.28
TRAPPC6B-205ENST00000555269 CEBPBP17676 345 aa13.32□□□□□ -0.28
TRAPPC6B-205ENST00000555269 BMP6P22004 513 aa13.32□□□□□ -0.28
TRAPPC6B-205ENST00000555269 ALDH1A3P47895 512 aa13.32□□□□□ -0.28
TRAPPC6B-205ENST00000555269 BIRC3Q13489 604 aa13.32□□□□□ -0.28
TRAPPC6B-205ENST00000555269 TRPC3Q13507 836 aa13.32□□□□□ -0.28
TRAPPC6B-205ENST00000555269 WDR72Q3MJ13 1102 aa13.32□□□□□ -0.28
TRAPPC6B-205ENST00000555269 MGAT5BQ3V5L5 792 aa13.32□□□□□ -0.28
TRAPPC6B-205ENST00000555269 ANKRD40Q6AI12 368 aa13.32□□□□□ -0.28
TRAPPC6B-205ENST00000555269 PARM1Q6UWI2 310 aa13.32□□□□□ -0.28
TRAPPC6B-205ENST00000555269 HFE2Q6ZVN8 426 aa13.32□□□□□ -0.28
TRAPPC6B-205ENST00000555269 ELOA2Q8IYF1 753 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC6B-205ENST00000555269 DCP1BQ8IZD4 617 aaKnown RBP13.32□□□□□ -0.28
TRAPPC6B-205ENST00000555269 ADGRF2Q8IZF7 708 aa13.32□□□□□ -0.28
TRAPPC6B-205ENST00000555269 TMEM86AQ8N2M4 240 aa13.32□□□□□ -0.28
TRAPPC6B-205ENST00000555269 TMC2Q8TDI7 906 aa13.32□□□□□ -0.28
TRAPPC6B-205ENST00000555269 GIPC2Q8TF65 315 aa13.32□□□□□ -0.28
TRAPPC6B-205ENST00000555269 KBTBD7Q8WVZ9 684 aa13.32□□□□□ -0.28
TRAPPC6B-205ENST00000555269 SEPT5Q99719 369 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC6B-205ENST00000555269 ACBD6Q9BR61 282 aa13.32□□□□□ -0.28
TRAPPC6B-205ENST00000555269 MRPL45Q9BRJ2 306 aaKnown RBP13.32□□□□□ -0.28
TRAPPC6B-205ENST00000555269 XYLT2Q9H1B5 865 aa13.32□□□□□ -0.28
TRAPPC6B-205ENST00000555269 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.32□□□□□ -0.28
TRAPPC6B-205ENST00000555269 NXF1Q9UBU9 619 aaKnown RBP13.32□□□□□ -0.28
TRAPPC6B-205ENST00000555269 SORCS3Q9UPU3 1222 aa13.32□□□□□ -0.28
TRAPPC6B-205ENST00000555269 MYBPHLA2RUH7 354 aa13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 PRR33A8MZF0 331 aa13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 ANHXE9PGG2 379 aa13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 BIN1O00499 593 aa13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 MOSPD3O75425 235 aa13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 PDGFBP01127 241 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 TRIM49P0CI25 452 aa13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 TRIM49CP0CI26 452 aa13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 HAPLN1P10915 354 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 RPL13P26373 211 aaKnown RBP13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 GNL1P36915 607 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 LHX1P48742 406 aa13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 GPR15P49685 360 aa13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 VAMP7P51809 220 aa13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 EPHB3P54753 998 aa13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 CDH8P55286 799 aa13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 SIGLEC14Q08ET2 396 aa13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 TDGQ13569 410 aa13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 CAMK4Q16566 473 aa13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 NFIL3Q16649 462 aa13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 PRSS36Q5K4E3 855 aa13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 CYP4A22Q5TCH4 519 aa13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 SDHAF4Q5VUM1 108 aa13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 IQCEQ6IPM2 695 aa13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 SV2AQ7L0J3 742 aa13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 DPH6Q7L8W6 267 aa13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 DNAJB7Q7Z6W7 309 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 GPIHBP1Q8IV16 184 aa13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 NPAS3Q8IXF0 933 aa13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 FAM186BQ8IYM0 893 aa13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 ADSSL1Q8N142 457 aa13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 ELMOD1Q8N336 334 aa13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 FGF14Q92915 247 aa13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 PBXIP1Q96AQ6 731 aa13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 ASIC4Q96FT7 647 aa13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 ZSWIM3Q96MP5 696 aa13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 PKMYT1Q99640 499 aa13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 PI4K2AQ9BTU6 479 aa13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 LRRC3Q9BY71 257 aa13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 ZNF334Q9HCZ1 680 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 ABI2Q9NYB9 513 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 IGSF9Q9P2J2 1179 aa13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 HOOK1Q9UJC3 728 aaKnown RBP13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 NME7Q9Y5B8 376 aa13.31□□□□□ -0.28
TRAPPC6B-205ENST00000555269 TRIM49BA6NDI0 452 aa13.3□□□□□ -0.28
TRAPPC6B-205ENST00000555269 LRRN2O75325 713 aa13.3□□□□□ -0.28
TRAPPC6B-205ENST00000555269 ATF6P18850 670 aa13.3□□□□□ -0.28
TRAPPC6B-205ENST00000555269 COL9A1P20849 921 aa13.3□□□□□ -0.28
TRAPPC6B-205ENST00000555269 WARSP23381 471 aaKnown RBP13.3□□□□□ -0.28
TRAPPC6B-205ENST00000555269 CYP2F1P24903 491 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms