RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 EDNRBP24530 442 aa6.56□□□□□ -1.36
VRK1-203ENST00000555067 ABCG1P45844 678 aa6.56□□□□□ -1.36
VRK1-203ENST00000555067 PROK1P58294 105 aa6.56□□□□□ -1.36
VRK1-203ENST00000555067 NXPH1P58417 271 aa6.56□□□□□ -1.36
VRK1-203ENST00000555067 KIF23Q02241 960 aaPredicted RBP6.56□□□□□ -1.36
VRK1-203ENST00000555067 IL10RAQ13651 578 aa6.56□□□□□ -1.36
VRK1-203ENST00000555067 MLC1Q15049 377 aa6.56□□□□□ -1.36
VRK1-203ENST00000555067 ABCB5Q2M3G0 1257 aa6.56□□□□□ -1.36
VRK1-203ENST00000555067 LONRF3Q496Y0 759 aa6.56□□□□□ -1.36
VRK1-203ENST00000555067 C10orf62Q5T681 223 aaPredicted RBP6.56□□□□□ -1.36
VRK1-203ENST00000555067 TAPT1Q6NXT6 567 aa6.56□□□□□ -1.36
VRK1-203ENST00000555067 PDSS2Q86YH6 399 aa6.56□□□□□ -1.36
VRK1-203ENST00000555067 SH2D3CQ8N5H7 860 aa6.56□□□□□ -1.36
VRK1-203ENST00000555067 B3GALNT2Q8NCR0 500 aa6.56□□□□□ -1.36
VRK1-203ENST00000555067 SVIPQ8NHG7 77 aa6.56□□□□□ -1.36
VRK1-203ENST00000555067 TEKT5Q96M29 485 aa6.56□□□□□ -1.36
VRK1-203ENST00000555067 SMOQ99835 787 aa6.56□□□□□ -1.36
VRK1-203ENST00000555067 TRHDEQ9UKU6 1024 aa6.56□□□□□ -1.36
VRK1-203ENST00000555067 ADM5C9JUS6 153 aa6.55□□□□□ -1.36
VRK1-203ENST00000555067 GCOM1H8Y6P7 765 aaPredicted RBP6.55□□□□□ -1.36
VRK1-203ENST00000555067 PCDHGA12O60330 932 aa6.55□□□□□ -1.36
VRK1-203ENST00000555067 PPP3CBP16298 524 aa6.55□□□□□ -1.36
VRK1-203ENST00000555067 MC2RQ01718 297 aa6.55□□□□□ -1.36
VRK1-203ENST00000555067 ZRSR2Q15696 482 aaKnown RBP6.55□□□□□ -1.36
VRK1-203ENST00000555067 TSTD2Q5T7W7 516 aa6.55□□□□□ -1.36
VRK1-203ENST00000555067 FAM102BQ5T8I3 360 aa6.55□□□□□ -1.36
VRK1-203ENST00000555067 TTC7BQ86TV6 843 aa6.55□□□□□ -1.36
VRK1-203ENST00000555067 TCEAL8Q8IYN2 117 aa6.55□□□□□ -1.36
VRK1-203ENST00000555067 NME8Q8N427 588 aa6.55□□□□□ -1.36
VRK1-203ENST00000555067 ZNF366Q8N895 744 aa6.55□□□□□ -1.36
VRK1-203ENST00000555067 SLC17A8Q8NDX2 589 aa6.55□□□□□ -1.36
VRK1-203ENST00000555067 SCAMP4Q969E2 229 aa6.55□□□□□ -1.36
VRK1-203ENST00000555067 COA7Q96BR5 231 aa6.55□□□□□ -1.36
VRK1-203ENST00000555067 ZNF778Q96MU6 729 aa6.55□□□□□ -1.36
VRK1-203ENST00000555067 TRIB1Q96RU8 372 aa6.55□□□□□ -1.36
VRK1-203ENST00000555067 SLC29A3Q9BZD2 475 aa6.55□□□□□ -1.36
VRK1-203ENST00000555067 RLIMQ9NVW2 624 aa6.55□□□□□ -1.36
VRK1-203ENST00000555067 SIDT1Q9NXL6 827 aaKnown RBP6.55□□□□□ -1.36
VRK1-203ENST00000555067 SLC45A2Q9UMX9 530 aa6.55□□□□□ -1.36
VRK1-203ENST00000555067 PCDHGA9Q9Y5G4 932 aaKnown RBP6.55□□□□□ -1.36
VRK1-203ENST00000555067 PCDHGA8Q9Y5G5 932 aa6.55□□□□□ -1.36
VRK1-203ENST00000555067 PCDHGA7Q9Y5G6 932 aa6.55□□□□□ -1.36
VRK1-203ENST00000555067 PCDHGA6Q9Y5G7 932 aa6.55□□□□□ -1.36
VRK1-203ENST00000555067 PCDHGA3Q9Y5H0 932 aa6.55□□□□□ -1.36
VRK1-203ENST00000555067 WDR27A2RRH5 827 aa6.54□□□□□ -1.36
VRK1-203ENST00000555067 CHRM2P08172 466 aa6.54□□□□□ -1.36
VRK1-203ENST00000555067 NPTX2P47972 431 aa6.54□□□□□ -1.36
VRK1-203ENST00000555067 ZNF81P51508 661 aa6.54□□□□□ -1.36
VRK1-203ENST00000555067 KRTAP10-6P60371 365 aaPredicted RBP6.54□□□□□ -1.36
VRK1-203ENST00000555067 NXNQ6DKJ4 435 aa6.54□□□□□ -1.36
VRK1-203ENST00000555067 NSUN7Q8NE18 718 aaKnown RBP6.54□□□□□ -1.36
VRK1-203ENST00000555067 NSUN6Q8TEA1 469 aaKnown RBP6.54□□□□□ -1.36
VRK1-203ENST00000555067 HASPINQ8TF76 798 aa6.54□□□□□ -1.36
VRK1-203ENST00000555067 KAT5Q92993 513 aa6.54□□□□□ -1.36
VRK1-203ENST00000555067 CHMP4CQ96CF2 233 aa6.54□□□□□ -1.36
VRK1-203ENST00000555067 DMRTA2Q96SC8 542 aa6.54□□□□□ -1.36
VRK1-203ENST00000555067 ZNF180Q9UJW8 692 aa6.54□□□□□ -1.36
VRK1-203ENST00000555067 PCDHB1Q9Y5F3 818 aa6.54□□□□□ -1.36
VRK1-203ENST00000555067 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.54□□□□□ -1.36
VRK1-203ENST00000555067 WNT6Q9Y6F9 365 aa6.54□□□□□ -1.36
VRK1-203ENST00000555067 SPATA31A3Q5VYP0 1347 aa6.53□□□□□ -1.36
VRK1-203ENST00000555067 E2F8A0AVK6 867 aa6.53□□□□□ -1.36
VRK1-203ENST00000555067 GNAI3P08754 354 aa6.53□□□□□ -1.36
VRK1-203ENST00000555067 CYP2C19P33261 490 aa6.53□□□□□ -1.36
VRK1-203ENST00000555067 ADKP55263 362 aaKnown RBP6.53□□□□□ -1.36
VRK1-203ENST00000555067 GNAI1P63096 354 aa6.53□□□□□ -1.36
VRK1-203ENST00000555067 CCDC93Q567U6 631 aa6.53□□□□□ -1.36
VRK1-203ENST00000555067 CLEC4GQ6UXB4 293 aa6.53□□□□□ -1.36
VRK1-203ENST00000555067 ZBTB46Q86UZ6 589 aa6.53□□□□□ -1.36
VRK1-203ENST00000555067 MAGEB6Q8N7X4 407 aa6.53□□□□□ -1.36
VRK1-203ENST00000555067 PBKQ96KB5 322 aa6.53□□□□□ -1.36
VRK1-203ENST00000555067 KLC4Q9NSK0 619 aa6.53□□□□□ -1.36
VRK1-203ENST00000555067 A0A0B4J269 797 aa6.52□□□□□ -1.37
VRK1-203ENST00000555067 GOLGA6CA6NDK9 693 aa6.52□□□□□ -1.37
VRK1-203ENST00000555067 GOLGA6BA6NDN3 693 aa6.52□□□□□ -1.37
VRK1-203ENST00000555067 LINC00473A8K010 186 aa6.52□□□□□ -1.37
VRK1-203ENST00000555067 E9PLN8 166 aa6.52□□□□□ -1.37
VRK1-203ENST00000555067 FZD9O00144 591 aa6.52□□□□□ -1.37
VRK1-203ENST00000555067 URI1O94763 535 aaPredicted RBP6.52□□□□□ -1.37
VRK1-203ENST00000555067 CHEK2O96017 543 aa6.52□□□□□ -1.37
VRK1-203ENST00000555067 GOLGA6DP0CG33 693 aa6.52□□□□□ -1.37
VRK1-203ENST00000555067 MALP21145 153 aa6.52□□□□□ -1.37
VRK1-203ENST00000555067 FOXD4Q12950 439 aaPredicted RBP6.52□□□□□ -1.37
VRK1-203ENST00000555067 TUBB3Q13509 450 aa6.52□□□□□ -1.37
VRK1-203ENST00000555067 GFOD2Q3B7J2 385 aa6.52□□□□□ -1.37
VRK1-203ENST00000555067 FAM153CQ494X1 144 aa6.52□□□□□ -1.37
VRK1-203ENST00000555067 KIAA1614Q5VZ46 1190 aa6.52□□□□□ -1.37
VRK1-203ENST00000555067 DGKHQ86XP1 1220 aa6.52□□□□□ -1.37
VRK1-203ENST00000555067 POC1BQ8TC44 478 aa6.52□□□□□ -1.37
VRK1-203ENST00000555067 LRIG1Q96JA1 1093 aa6.52□□□□□ -1.37
VRK1-203ENST00000555067 CAMKK2Q96RR4 588 aa6.52□□□□□ -1.37
VRK1-203ENST00000555067 VKORC1Q9BQB6 163 aa6.52□□□□□ -1.37
VRK1-203ENST00000555067 ALG8Q9BVK2 526 aa6.52□□□□□ -1.37
VRK1-203ENST00000555067 GOLGA6AQ9NYA3 693 aa6.52□□□□□ -1.37
VRK1-203ENST00000555067 TNKSO95271 1327 aa6.51□□□□□ -1.37
VRK1-203ENST00000555067 F2RL2O00254 374 aa6.51□□□□□ -1.37
VRK1-203ENST00000555067 POLRMTO00411 1230 aaKnown RBP6.51□□□□□ -1.37
VRK1-203ENST00000555067 GABRDO14764 452 aa6.51□□□□□ -1.37
VRK1-203ENST00000555067 TRIAP1O43715 76 aa6.51□□□□□ -1.37
VRK1-203ENST00000555067 SOAT2O75908 522 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms