RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 GOLGA8KD6RF30 607 aa18.53■□□□□ 0.56
SHOX-204ENST00000554971 PMM2O15305 246 aa18.53■□□□□ 0.56
SHOX-204ENST00000554971 KIF4AO95239 1232 aa18.53■□□□□ 0.56
SHOX-204ENST00000554971 MYBL2P10244 700 aa18.53■□□□□ 0.56
SHOX-204ENST00000554971 CETN1Q12798 172 aa18.53■□□□□ 0.56
SHOX-204ENST00000554971 BRSK2Q8IWQ3 736 aa18.53■□□□□ 0.56
SHOX-204ENST00000554971 SLC30A5Q8TAD4 765 aa18.53■□□□□ 0.56
SHOX-204ENST00000554971 CLP1Q92989 425 aaKnown RBP18.53■□□□□ 0.56
SHOX-204ENST00000554971 RPF1Q9H9Y2 349 aaKnown RBP18.53■□□□□ 0.56
SHOX-204ENST00000554971 TOPORSQ9NS56 1045 aaPredicted RBP18.53■□□□□ 0.56
SHOX-204ENST00000554971 CACNG4Q9UBN1 327 aa18.53■□□□□ 0.56
SHOX-204ENST00000554971 DNAJB4Q9UDY4 337 aa18.53■□□□□ 0.56
SHOX-204ENST00000554971 PLXNA4Q9HCM2 1894 aa18.52■□□□□ 0.56
SHOX-204ENST00000554971 C5orf42Q9H799 3197 aa18.52■□□□□ 0.56
SHOX-204ENST00000554971 KIAA0391O15091 583 aaKnown RBP18.52■□□□□ 0.56
SHOX-204ENST00000554971 ZMYND10O75800 440 aa18.52■□□□□ 0.56
SHOX-204ENST00000554971 FTCDO95954 541 aa18.52■□□□□ 0.56
SHOX-204ENST00000554971 LDHAP00338 332 aaKnown RBP18.52■□□□□ 0.56
SHOX-204ENST00000554971 YARSP54577 528 aaKnown RBP18.52■□□□□ 0.56
SHOX-204ENST00000554971 SOX4Q06945 474 aaPredicted RBP18.52■□□□□ 0.56
SHOX-204ENST00000554971 CLUL1Q15846 466 aa18.52■□□□□ 0.56
SHOX-204ENST00000554971 KYAT1Q16773 422 aa18.52■□□□□ 0.56
SHOX-204ENST00000554971 INTS8Q75QN2 995 aaKnown RBP18.52■□□□□ 0.56
SHOX-204ENST00000554971 SND1Q7KZF4 910 aaKnown RBP eCLIP18.52■□□□□ 0.56
SHOX-204ENST00000554971 LRRC43Q8N309 656 aa18.52■□□□□ 0.56
SHOX-204ENST00000554971 MREGQ8N565 214 aa18.52■□□□□ 0.56
SHOX-204ENST00000554971 PLEKHO2Q8TD55 490 aa18.52■□□□□ 0.56
SHOX-204ENST00000554971 HDAC7Q8WUI4 952 aa18.52■□□□□ 0.56
SHOX-204ENST00000554971 PACSIN1Q9BY11 444 aa18.52■□□□□ 0.56
SHOX-204ENST00000554971 NKX2-4Q9H2Z4 354 aa18.52■□□□□ 0.56
SHOX-204ENST00000554971 RBAKQ9NYW8 714 aaPredicted RBP18.52■□□□□ 0.56
SHOX-204ENST00000554971 UNC80Q8N2C7 3258 aa18.51■□□□□ 0.55
SHOX-204ENST00000554971 F8VZ95 297 aa18.51■□□□□ 0.55
SHOX-204ENST00000554971 CCDC188H7C350 402 aa18.51■□□□□ 0.55
SHOX-204ENST00000554971 EXOC3O60645 756 aa18.51■□□□□ 0.55
SHOX-204ENST00000554971 KRT13P13646 458 aa18.51■□□□□ 0.55
SHOX-204ENST00000554971 KCNE1P15382 129 aa18.51■□□□□ 0.55
SHOX-204ENST00000554971 PBX3P40426 434 aa18.51■□□□□ 0.55
SHOX-204ENST00000554971 TAP1Q03518 808 aa18.51■□□□□ 0.55
SHOX-204ENST00000554971 DSC1Q08554 894 aa18.51■□□□□ 0.55
SHOX-204ENST00000554971 ZSCAN26Q16670 478 aa18.51■□□□□ 0.55
SHOX-204ENST00000554971 EFCAB13Q8IY85 973 aa18.51■□□□□ 0.55
SHOX-204ENST00000554971 TPCN2Q8NHX9 752 aa18.51■□□□□ 0.55
SHOX-204ENST00000554971 WHAMMQ8TF30 809 aa18.51■□□□□ 0.55
SHOX-204ENST00000554971 LRCH3Q96II8 777 aa18.51■□□□□ 0.55
SHOX-204ENST00000554971 SH3GL2Q99962 352 aa18.51■□□□□ 0.55
SHOX-204ENST00000554971 PAAF1Q9BRP4 392 aa18.51■□□□□ 0.55
SHOX-204ENST00000554971 NRDE2Q9H7Z3 1164 aa18.51■□□□□ 0.55
SHOX-204ENST00000554971 FAM204AQ9H8W3 233 aa18.51■□□□□ 0.55
SHOX-204ENST00000554971 PTPRJQ12913 1337 aa18.51■□□□□ 0.55
SHOX-204ENST00000554971 DDX3XO00571 662 aaKnown RBP eCLIP18.51■□□□□ 0.55
SHOX-204ENST00000554971 TMEM253P0C7T8 217 aa18.51■□□□□ 0.55
SHOX-204ENST00000554971 GGCXP38435 758 aa18.51■□□□□ 0.55
SHOX-204ENST00000554971 NOP2P46087 812 aaKnown RBP18.51■□□□□ 0.55
SHOX-204ENST00000554971 HNRNPH2P55795 449 aaKnown RBP18.51■□□□□ 0.55
SHOX-204ENST00000554971 BFSP1Q12934 665 aa18.51■□□□□ 0.55
SHOX-204ENST00000554971 ZBTB6Q15916 424 aa18.51■□□□□ 0.55
SHOX-204ENST00000554971 C18orf25Q96B23 403 aaPredicted RBP18.51■□□□□ 0.55
SHOX-204ENST00000554971 RPS6KC1Q96S38 1066 aa18.51■□□□□ 0.55
SHOX-204ENST00000554971 PSMB7Q99436 277 aa18.51■□□□□ 0.55
SHOX-204ENST00000554971 MRPL9Q9BYD2 267 aaKnown RBP18.51■□□□□ 0.55
SHOX-204ENST00000554971 PLEKHA5Q9HAU0 1116 aa18.51■□□□□ 0.55
SHOX-204ENST00000554971 GOLGA2P5Q9HBQ8 144 aa18.51■□□□□ 0.55
SHOX-204ENST00000554971 APEX2Q9UBZ4 518 aa18.51■□□□□ 0.55
SHOX-204ENST00000554971 DNAJC12Q9UKB3 198 aa18.51■□□□□ 0.55
SHOX-204ENST00000554971 ATG2AQ2TAZ0 1938 aa18.5■□□□□ 0.55
SHOX-204ENST00000554971 ZNF233A6NK53 670 aa18.5■□□□□ 0.55
SHOX-204ENST00000554971 AGPSO00116 658 aa18.5■□□□□ 0.55
SHOX-204ENST00000554971 NFICP08651 508 aa18.5■□□□□ 0.55
SHOX-204ENST00000554971 IGFBP6P24592 240 aaPredicted RBP18.5■□□□□ 0.55
SHOX-204ENST00000554971 GYS2P54840 703 aa18.5■□□□□ 0.55
SHOX-204ENST00000554971 POU5F1Q01860 360 aaKnown RBP18.5■□□□□ 0.55
SHOX-204ENST00000554971 CYP24A1Q07973 514 aa18.5■□□□□ 0.55
SHOX-204ENST00000554971 GRIK3Q13003 919 aa18.5■□□□□ 0.55
SHOX-204ENST00000554971 RAB30Q15771 203 aa18.5■□□□□ 0.55
SHOX-204ENST00000554971 JADE1Q6IE81 842 aa18.5■□□□□ 0.55
SHOX-204ENST00000554971 TMEM173Q86WV6 379 aaPredicted RBP18.5■□□□□ 0.55
SHOX-204ENST00000554971 COLGALT2Q8IYK4 626 aa18.5■□□□□ 0.55
SHOX-204ENST00000554971 FIBCD1Q8N539 461 aa18.5■□□□□ 0.55
SHOX-204ENST00000554971 C1orf131Q8NDD1 294 aaKnown RBP18.5■□□□□ 0.55
SHOX-204ENST00000554971 URGCPQ8TCY9 931 aa18.5■□□□□ 0.55
SHOX-204ENST00000554971 FAM212AQ96EL1 285 aa18.5■□□□□ 0.55
SHOX-204ENST00000554971 MFSD14AQ96MC6 490 aa18.5■□□□□ 0.55
SHOX-204ENST00000554971 C17orf80Q9BSJ5 609 aa18.5■□□□□ 0.55
SHOX-204ENST00000554971 TTC7AQ9ULT0 858 aaPredicted RBP18.5■□□□□ 0.55
SHOX-204ENST00000554971 NCANO14594 1321 aa18.5■□□□□ 0.55
SHOX-204ENST00000554971 PRRC2BQ5JSZ5 2229 aaKnown RBP18.5■□□□□ 0.55
SHOX-204ENST00000554971 F8W810 466 aa18.49■□□□□ 0.55
SHOX-204ENST00000554971 HSF2BPO75031 334 aa18.49■□□□□ 0.55
SHOX-204ENST00000554971 THP07101 528 aa18.49■□□□□ 0.55
SHOX-204ENST00000554971 PPP2R5EQ16537 467 aa18.49■□□□□ 0.55
SHOX-204ENST00000554971 HABP4Q5JVS0 413 aaKnown RBP18.49■□□□□ 0.55
SHOX-204ENST00000554971 SCARA3Q6AZY7 606 aa18.49■□□□□ 0.55
SHOX-204ENST00000554971 GPIHBP1Q8IV16 184 aa18.49■□□□□ 0.55
SHOX-204ENST00000554971 RASGEF1CQ8N431 466 aa18.49■□□□□ 0.55
SHOX-204ENST00000554971 RSPH1Q8WYR4 309 aa18.49■□□□□ 0.55
SHOX-204ENST00000554971 TIFAQ96CG3 184 aa18.49■□□□□ 0.55
SHOX-204ENST00000554971 MS4A14Q96JA4 679 aa18.49■□□□□ 0.55
SHOX-204ENST00000554971 SYT11Q9BT88 431 aa18.49■□□□□ 0.55
SHOX-204ENST00000554971 INTS2Q9H0H0 1204 aaKnown RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms