RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 ANKS4BQ8N8V4 417 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 RCBTB1Q8NDN9 531 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 BHLHE22Q8NFJ8 381 aaPredicted RBP7.03□□□□□ -1.28
SCFD1-212ENST00000554486 SCFD2Q8WU76 684 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 EPSTI1Q96J88 318 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 CLUHP3Q96NS8 147 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 MMTAG2Q9BU76 263 aaKnown RBP7.03□□□□□ -1.28
SCFD1-212ENST00000554486 TEKT3Q9BXF9 490 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 GOLPH3LQ9H4A5 285 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 TBC1D22BQ9NU19 505 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 FBXL7Q9UJT9 491 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 ZHX1Q9UKY1 873 aaPredicted RBP7.03□□□□□ -1.28
SCFD1-212ENST00000554486 PCDHA12Q9UN75 941 aa7.03□□□□□ -1.28
SCFD1-212ENST00000554486 TMA7Q9Y2S6 64 aaKnown RBP7.03□□□□□ -1.28
SCFD1-212ENST00000554486 A0A087X0B3 334 aa7.02□□□□□ -1.29
SCFD1-212ENST00000554486 FAM237AA0A1B0GTK4 181 aa7.02□□□□□ -1.29
SCFD1-212ENST00000554486 A0A1W2PQ45 241 aaPredicted RBP7.02□□□□□ -1.29
SCFD1-212ENST00000554486 A0A1W2PQY0 241 aa7.02□□□□□ -1.29
SCFD1-212ENST00000554486 DDX39AO00148 427 aaKnown RBP7.02□□□□□ -1.29
SCFD1-212ENST00000554486 NRDCO43847 1150 aa7.02□□□□□ -1.29
SCFD1-212ENST00000554486 HMGCRP04035 888 aa7.02□□□□□ -1.29
SCFD1-212ENST00000554486 MSL3P1P0C860 447 aa7.02□□□□□ -1.29
SCFD1-212ENST00000554486 TXNP10599 105 aaKnown RBP7.02□□□□□ -1.29
SCFD1-212ENST00000554486 CMA1P23946 247 aa7.02□□□□□ -1.29
SCFD1-212ENST00000554486 CCND3P30281 292 aaPredicted RBP7.02□□□□□ -1.29
SCFD1-212ENST00000554486 RTP1P59025 263 aa7.02□□□□□ -1.29
SCFD1-212ENST00000554486 UBE2HP62256 183 aa7.02□□□□□ -1.29
SCFD1-212ENST00000554486 SUMO1P63165 101 aaKnown RBP7.02□□□□□ -1.29
SCFD1-212ENST00000554486 TNFAIP2Q03169 654 aa7.02□□□□□ -1.29
SCFD1-212ENST00000554486 NEDD9Q14511 834 aa7.02□□□□□ -1.29
SCFD1-212ENST00000554486 TMEM266Q2M3C6 531 aa7.02□□□□□ -1.29
SCFD1-212ENST00000554486 DUSP28Q4G0W2 176 aa7.02□□□□□ -1.29
SCFD1-212ENST00000554486 CELF3Q5SZQ8 465 aaKnown RBP7.02□□□□□ -1.29
SCFD1-212ENST00000554486 RESP18Q5W5W9 173 aa7.02□□□□□ -1.29
SCFD1-212ENST00000554486 E4F1Q66K89 784 aaPredicted RBP7.02□□□□□ -1.29
SCFD1-212ENST00000554486 NCAPH2Q6IBW4 605 aa7.02□□□□□ -1.29
SCFD1-212ENST00000554486 METTL7BQ6UX53 244 aa7.02□□□□□ -1.29
SCFD1-212ENST00000554486 CEP128Q6ZU80 1094 aa7.02□□□□□ -1.29
SCFD1-212ENST00000554486 USP53Q70EK8 1073 aa7.02□□□□□ -1.29
SCFD1-212ENST00000554486 NAT16Q8N8M0 369 aa7.02□□□□□ -1.29
SCFD1-212ENST00000554486 AK8Q96MA6 479 aa7.02□□□□□ -1.29
SCFD1-212ENST00000554486 SDF4Q9BRK5 362 aa7.02□□□□□ -1.29
SCFD1-212ENST00000554486 CCSER1Q9C0I3 900 aa7.02□□□□□ -1.29
SCFD1-212ENST00000554486 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.02□□□□□ -1.29
SCFD1-212ENST00000554486 FBLN5Q9UBX5 448 aa7.02□□□□□ -1.29
SCFD1-212ENST00000554486 SLC9A2Q9UBY0 812 aa7.02□□□□□ -1.29
SCFD1-212ENST00000554486 NRBP1Q9UHY1 535 aa7.02□□□□□ -1.29
SCFD1-212ENST00000554486 PTPN22Q9Y2R2 807 aa7.02□□□□□ -1.29
SCFD1-212ENST00000554486 A0A1B0GVL5 298 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 GSTTP1A0A1W2PQM5 241 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 GOLGA6L22H0YM25 854 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 NKRFO15226 690 aaKnown RBP eCLIP7.01□□□□□ -1.29
SCFD1-212ENST00000554486 MEFVO15553 781 aaPredicted RBP7.01□□□□□ -1.29
SCFD1-212ENST00000554486 CHMP2AO43633 222 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 GH1P01241 217 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 PFKFB1P16118 471 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 GALK1P51570 392 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 NDUFA8P51970 172 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 ACTR2P61160 394 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 SP4Q02446 784 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 LAPTM5Q13571 262 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 EPHA7Q15375 998 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 UGCGQ16739 394 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 HSDL1Q3SXM5 330 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 HYIQ5T013 277 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 HLA-DQA1Q5Y7H0 255 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 ABHD15Q6UXT9 468 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 MIER3Q7Z3K6 550 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 CTU1Q7Z7A3 348 aaKnown RBP7.01□□□□□ -1.29
SCFD1-212ENST00000554486 KIAA0907Q7Z7F0 614 aaPredicted RBP7.01□□□□□ -1.29
SCFD1-212ENST00000554486 CABP7Q86V35 215 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 DHX37Q8IY37 1157 aaKnown RBP7.01□□□□□ -1.29
SCFD1-212ENST00000554486 FSIP1Q8NA03 581 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 GIMAP8Q8ND71 665 aaPredicted RBP7.01□□□□□ -1.29
SCFD1-212ENST00000554486 ENGASEQ8NFI3 743 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 RDM1Q8NG50 284 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 OR6J1Q8NGC5 347 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 SLC7A14Q8TBB6 771 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 GPT2Q8TD30 523 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 LRRC15Q8TF66 581 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 MRPS27Q92552 414 aaKnown RBP7.01□□□□□ -1.29
SCFD1-212ENST00000554486 DYDC2Q96IM9 177 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 PPP1R16BQ96T49 567 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 PCYT2Q99447 389 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 GPR20Q99678 358 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 HSD17B14Q9BPX1 270 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 EIF2AK1Q9BQI3 630 aaKnown RBP7.01□□□□□ -1.29
SCFD1-212ENST00000554486 RAB34Q9BZG1 259 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 CDIP1Q9H305 208 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 MLXIPQ9HAP2 919 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 RGL1Q9NZL6 768 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 LRWD1Q9UFC0 647 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 FAM184BQ9ULE4 1060 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 HPSEQ9Y251 543 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 TRAF6Q9Y4K3 522 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 FRMPD3Q5JV73 1810 aa7.01□□□□□ -1.29
SCFD1-212ENST00000554486 IGKV6D-21A0A0A0MT36 114 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 CCDC163A0A0D9SF12 145 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 GOLGA6L4A6NEF3 574 aa7□□□□□ -1.29
SCFD1-212ENST00000554486 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms