RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 SIX2Q9NPC8 291 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 KRT82Q9NSB4 513 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 SAMD15Q9P1V8 674 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 CTNNAL1Q9UBT7 734 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 SWAP70Q9UH65 585 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 ZMYND8Q9ULU4 1186 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-207ENST00000554439 PTPN22Q9Y2R2 807 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 AFF2P51816 1311 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 MYH14Q7Z406 1995 aaKnown RBP2.74□□□□□ -1.97
PRPF39-207ENST00000554439 BCL9O00512 1426 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 UTRNP46939 3433 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 PHLPP1O60346 1717 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 TMEM110-MUSTN1A8MSY1 372 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 BTNL10A8MVZ5 291 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 KIAA0391O15091 583 aaKnown RBP2.74□□□□□ -1.97
PRPF39-207ENST00000554439 ASAP2O43150 1006 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 TBX1O43435 398 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 SNX3O60493 162 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 PPP1R11O60927 126 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-207ENST00000554439 DLGAP3O95886 979 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 H2AFZP0C0S5 128 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 PLA2G4BP0C869 781 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 HOXB4P17483 251 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-207ENST00000554439 CYP11B2P19099 503 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 GNA11P29992 359 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 HIBADHP31937 336 aaKnown RBP2.74□□□□□ -1.97
PRPF39-207ENST00000554439 NTF4P34130 210 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 KCNJ1P48048 391 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 GNAQP50148 359 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 PTENP60484 403 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 MGAT5Q09328 741 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 GRIK3Q13003 919 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 BIRC2Q13490 618 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 ITPK1Q13572 414 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 UBE4AQ14139 1066 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 ZNF268Q14587 947 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-207ENST00000554439 CNGA2Q16280 664 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 LONRF1Q17RB8 773 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 TMEM266Q2M3C6 531 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 ZC3H12AQ5D1E8 599 aaKnown RBP2.74□□□□□ -1.97
PRPF39-207ENST00000554439 TRIM68Q6AZZ1 485 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 TTC27Q6P3X3 843 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 SLCO4C1Q6ZQN7 724 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 H2AFVQ71UI9 128 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 BRINP3Q76B58 766 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 ARMC9Q7Z3E5 817 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 C12orf40Q86WS4 652 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 FITM2Q8N6M3 262 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 MAB21L3Q8N8X9 362 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 ANKRD42Q8N9B4 389 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 EIF1ADQ8N9N8 165 aaKnown RBP2.74□□□□□ -1.97
PRPF39-207ENST00000554439 NEK9Q8TD19 979 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.74□□□□□ -1.97
PRPF39-207ENST00000554439 KRT35Q92764 455 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 CENPTQ96BT3 561 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 ZBTB10Q96DT7 871 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 HOOK2Q96ED9 719 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 RMDN2Q96LZ7 410 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 EYA3Q99504 573 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 ERP44Q9BS26 406 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 RUSC1Q9BVN2 902 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 SPZ1Q9BXG8 430 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 YIPF3Q9GZM5 350 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 THAP2Q9H0W7 228 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 PABPC3Q9H361 631 aaKnown RBP2.74□□□□□ -1.97
PRPF39-207ENST00000554439 SLITRK6Q9H5Y7 841 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 CNOT10Q9H9A5 744 aaKnown RBP2.74□□□□□ -1.97
PRPF39-207ENST00000554439 FAM114A2Q9NRY5 505 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 SEPT11Q9NVA2 429 aaKnown RBP2.74□□□□□ -1.97
PRPF39-207ENST00000554439 BSDC1Q9NW68 430 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-207ENST00000554439 SLC5A4Q9NY91 659 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 GRHL1Q9NZI5 618 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 GCNT4Q9P109 453 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 SUCLA2Q9P2R7 463 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-207ENST00000554439 NKX1-2Q9UD57 310 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-207ENST00000554439 SEC63Q9UGP8 760 aaKnown RBP2.74□□□□□ -1.97
PRPF39-207ENST00000554439 KLHL3Q9UH77 587 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 DDX25Q9UHL0 483 aaKnown RBP2.74□□□□□ -1.97
PRPF39-207ENST00000554439 ADAM30Q9UKF2 790 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 NENFQ9UMX5 172 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 COG5Q9UP83 839 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 DAAM1Q9Y4D1 1078 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 DCCP43146 1447 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 COL22A1Q8NFW1 1626 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-207ENST00000554439 SCN7AQ01118 1682 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 ATAD5Q96QE3 1844 aa2.74□□□□□ -1.97
PRPF39-207ENST00000554439 DNAJC25-GNG10A0A024R161 153 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 C9IYK1 514 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 ALG1L2C9J202 215 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 CCDC188H7C350 402 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 CETN3O15182 167 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 TSPAN6O43657 245 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 LRRN2O75325 713 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 MED24O75448 989 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 KATNA1O75449 491 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 FLOT1O75955 427 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 ACSL3O95573 720 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 OAS1P00973 400 aaKnown RBP2.73□□□□□ -1.97
PRPF39-207ENST00000554439 AFPP02771 609 aaKnown RBP2.73□□□□□ -1.97
PRPF39-207ENST00000554439 KRT18P05783 430 aaKnown RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms