RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 ZNF263O14978 683 aa15.14■□□□□ 0.01
SPTLC2-202ENST00000554365 MEFVO15553 781 aaPredicted RBP15.14■□□□□ 0.01
SPTLC2-202ENST00000554365 PRPF6O94906 941 aaKnown RBP15.14■□□□□ 0.01
SPTLC2-202ENST00000554365 GCNT3O95395 438 aa15.14■□□□□ 0.01
SPTLC2-202ENST00000554365 ATXN1P54253 815 aaKnown RBP15.14■□□□□ 0.01
SPTLC2-202ENST00000554365 PMS1P54277 932 aaKnown RBP15.14■□□□□ 0.01
SPTLC2-202ENST00000554365 NRLP54845 237 aa15.14■□□□□ 0.01
SPTLC2-202ENST00000554365 LMNB2Q03252 620 aa15.14■□□□□ 0.01
SPTLC2-202ENST00000554365 STRN3Q13033 797 aa15.14■□□□□ 0.01
SPTLC2-202ENST00000554365 PPP2R5DQ14738 602 aa15.14■□□□□ 0.01
SPTLC2-202ENST00000554365 LPAL2Q16609 132 aa15.14■□□□□ 0.01
SPTLC2-202ENST00000554365 RNF19BQ6ZMZ0 732 aa15.14■□□□□ 0.01
SPTLC2-202ENST00000554365 HAUS6Q7Z4H7 955 aa15.14■□□□□ 0.01
SPTLC2-202ENST00000554365 MAP4K3Q8IVH8 894 aa15.14■□□□□ 0.01
SPTLC2-202ENST00000554365 ZNF687Q8N1G0 1237 aa15.14■□□□□ 0.01
SPTLC2-202ENST00000554365 ZSCAN18Q8TBC5 510 aaPredicted RBP15.14■□□□□ 0.01
SPTLC2-202ENST00000554365 IKZF4Q9H2S9 585 aa15.14■□□□□ 0.01
SPTLC2-202ENST00000554365 CHRDQ9H2X0 955 aa15.14■□□□□ 0.01
SPTLC2-202ENST00000554365 SLITRK6Q9H5Y7 841 aa15.14■□□□□ 0.01
SPTLC2-202ENST00000554365 LMAN1LQ9HAT1 526 aa15.14■□□□□ 0.01
SPTLC2-202ENST00000554365 TUBGCP4Q9UGJ1 667 aa15.14■□□□□ 0.01
SPTLC2-202ENST00000554365 GPR179Q6PRD1 2367 aa15.14■□□□□ 0.01
SPTLC2-202ENST00000554365 UBE4BO95155 1302 aa15.14■□□□□ 0.01
SPTLC2-202ENST00000554365 PRR5-ARHGAP8B1AHC4 643 aa15.13■□□□□ 0.01
SPTLC2-202ENST00000554365 MOSPD3O75425 235 aa15.13■□□□□ 0.01
SPTLC2-202ENST00000554365 ARHGAP8P85298 464 aa15.13■□□□□ 0.01
SPTLC2-202ENST00000554365 SPAG1Q07617 926 aa15.13■□□□□ 0.01
SPTLC2-202ENST00000554365 NOLC1Q14978 699 aaKnown RBP eCLIP15.13■□□□□ 0.01
SPTLC2-202ENST00000554365 TEAD2Q15562 447 aa15.13■□□□□ 0.01
SPTLC2-202ENST00000554365 SLC10A6Q3KNW5 377 aa15.13■□□□□ 0.01
SPTLC2-202ENST00000554365 ZCWPW2Q504Y3 356 aa15.13■□□□□ 0.01
SPTLC2-202ENST00000554365 L1TD1Q5T7N2 865 aaKnown RBP15.13■□□□□ 0.01
SPTLC2-202ENST00000554365 TMEM130Q8N3G9 435 aa15.13■□□□□ 0.01
SPTLC2-202ENST00000554365 DEPDC1BQ8WUY9 529 aa15.13■□□□□ 0.01
SPTLC2-202ENST00000554365 KCTD10Q9H3F6 313 aa15.13■□□□□ 0.01
SPTLC2-202ENST00000554365 PARD6AQ9NPB6 346 aa15.13■□□□□ 0.01
SPTLC2-202ENST00000554365 PCDHB8Q9UN66 801 aa15.13■□□□□ 0.01
SPTLC2-202ENST00000554365 TIMM13Q9Y5L4 95 aaPredicted RBP15.13■□□□□ 0.01
SPTLC2-202ENST00000554365 CEP250Q9BV73 2442 aa15.13■□□□□ 0.01
SPTLC2-202ENST00000554365 TOM1L1O75674 476 aa15.12■□□□□ 0.01
SPTLC2-202ENST00000554365 CCNE1P24864 410 aa15.12■□□□□ 0.01
SPTLC2-202ENST00000554365 ERCC5P28715 1186 aaPredicted RBP15.12■□□□□ 0.01
SPTLC2-202ENST00000554365 MATR3P43243 847 aaKnown RBP eCLIP15.12■□□□□ 0.01
SPTLC2-202ENST00000554365 CCR3P51677 355 aa15.12■□□□□ 0.01
SPTLC2-202ENST00000554365 SMTNP53814 917 aa15.12■□□□□ 0.01
SPTLC2-202ENST00000554365 YWHAHQ04917 246 aaPredicted RBP15.12■□□□□ 0.01
SPTLC2-202ENST00000554365 ALCAMQ13740 583 aa15.12■□□□□ 0.01
SPTLC2-202ENST00000554365 IQCB1Q15051 598 aa15.12■□□□□ 0.01
SPTLC2-202ENST00000554365 CT47A1Q5JQC4 288 aaPredicted RBP15.12■□□□□ 0.01
SPTLC2-202ENST00000554365 CENPPQ6IPU0 288 aa15.12■□□□□ 0.01
SPTLC2-202ENST00000554365 KLHL10Q6JEL2 608 aa15.12■□□□□ 0.01
SPTLC2-202ENST00000554365 PRR23BQ6ZRT6 265 aa15.12■□□□□ 0.01
SPTLC2-202ENST00000554365 MFSD6LQ8IWD5 586 aa15.12■□□□□ 0.01
SPTLC2-202ENST00000554365 NELFCDQ8IXH7 590 aa15.12■□□□□ 0.01
SPTLC2-202ENST00000554365 YAF2Q8IY57 180 aa15.12■□□□□ 0.01
SPTLC2-202ENST00000554365 LEMD2Q8NC56 503 aa15.12■□□□□ 0.01
SPTLC2-202ENST00000554365 NELFBQ8WX92 580 aa15.12■□□□□ 0.01
SPTLC2-202ENST00000554365 HVCN1Q96D96 273 aa15.12■□□□□ 0.01
SPTLC2-202ENST00000554365 DHTKD1Q96HY7 919 aaPredicted RBP15.12■□□□□ 0.01
SPTLC2-202ENST00000554365 PGLYRP2Q96PD5 576 aa15.12■□□□□ 0.01
SPTLC2-202ENST00000554365 BPIFA3Q9BQP9 254 aa15.12■□□□□ 0.01
SPTLC2-202ENST00000554365 IER2Q9BTL4 223 aa15.12■□□□□ 0.01
SPTLC2-202ENST00000554365 CBX8Q9HC52 389 aa15.12■□□□□ 0.01
SPTLC2-202ENST00000554365 TRPV5Q9NQA5 729 aa15.12■□□□□ 0.01
SPTLC2-202ENST00000554365 MAFFQ9ULX9 164 aa15.12■□□□□ 0.01
SPTLC2-202ENST00000554365 TBX20Q9UMR3 447 aa15.12■□□□□ 0.01
SPTLC2-202ENST00000554365 CTNND2Q9UQB3 1225 aa15.12■□□□□ 0.01
SPTLC2-202ENST00000554365 YIPF1Q9Y548 306 aa15.12■□□□□ 0.01
SPTLC2-202ENST00000554365 PCDHB13Q9Y5F0 798 aa15.12■□□□□ 0.01
SPTLC2-202ENST00000554365 NCANO14594 1321 aa15.12■□□□□ 0.01
SPTLC2-202ENST00000554365 TICRRQ7Z2Z1 1910 aa15.11■□□□□ 0.01
SPTLC2-202ENST00000554365 DCDC2BA2VCK2 349 aa15.11■□□□□ 0.01
SPTLC2-202ENST00000554365 TRIM49BA6NDI0 452 aa15.11■□□□□ 0.01
SPTLC2-202ENST00000554365 HEPACAM2A8MVW5 462 aa15.11■□□□□ 0.01
SPTLC2-202ENST00000554365 CLDN3O15551 220 aa15.11■□□□□ 0.01
SPTLC2-202ENST00000554365 TGFB1I1O43294 461 aa15.11■□□□□ 0.01
SPTLC2-202ENST00000554365 OR4Q2P0C623 313 aa15.11■□□□□ 0.01
SPTLC2-202ENST00000554365 CXCL8P10145 99 aa15.11■□□□□ 0.01
SPTLC2-202ENST00000554365 TDGF1P13385 188 aa15.11■□□□□ 0.01
SPTLC2-202ENST00000554365 PPP1R2P41236 205 aa15.11■□□□□ 0.01
SPTLC2-202ENST00000554365 CXCL12P48061 93 aa15.11■□□□□ 0.01
SPTLC2-202ENST00000554365 EPHA5P54756 1037 aa15.11■□□□□ 0.01
SPTLC2-202ENST00000554365 SPEM2Q0P670 501 aa15.11■□□□□ 0.01
SPTLC2-202ENST00000554365 PAK1Q13153 545 aa15.11■□□□□ 0.01
SPTLC2-202ENST00000554365 NCAPHQ15003 741 aa15.11■□□□□ 0.01
SPTLC2-202ENST00000554365 KNOP1Q1ED39 458 aaKnown RBP15.11■□□□□ 0.01
SPTLC2-202ENST00000554365 TTI2Q6NXR4 508 aa15.11■□□□□ 0.01
SPTLC2-202ENST00000554365 GPIHBP1Q8IV16 184 aa15.11■□□□□ 0.01
SPTLC2-202ENST00000554365 DHX40Q8IX18 779 aaKnown RBP15.11■□□□□ 0.01
SPTLC2-202ENST00000554365 SHKBP1Q8TBC3 707 aa15.11■□□□□ 0.01
SPTLC2-202ENST00000554365 CSGALNACT1Q8TDX6 532 aa15.11■□□□□ 0.01
SPTLC2-202ENST00000554365 CNTNAP3BQ96NU0 1288 aa15.11■□□□□ 0.01
SPTLC2-202ENST00000554365 DUSP9Q99956 384 aaKnown RBP15.11■□□□□ 0.01
SPTLC2-202ENST00000554365 CNTNAP3Q9BZ76 1288 aa15.11■□□□□ 0.01
SPTLC2-202ENST00000554365 RBSNQ9H1K0 784 aa15.11■□□□□ 0.01
SPTLC2-202ENST00000554365 TRPV4Q9HBA0 871 aa15.11■□□□□ 0.01
SPTLC2-202ENST00000554365 DACH1Q9UI36 760 aa15.11■□□□□ 0.01
SPTLC2-202ENST00000554365 KCNG1Q9UIX4 513 aa15.11■□□□□ 0.01
SPTLC2-202ENST00000554365 RWDD2AQ9UIY3 292 aa15.11■□□□□ 0.01
SPTLC2-202ENST00000554365 COL4A2P08572 1712 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms