RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 GRID2IPA4D2P6 1211 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 GOLGA6CA6NDK9 693 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 hCG_1984214I3L0E3 225 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 CES2O00748 559 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 SEPT4O43236 478 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 TEX33O43247 280 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 HSF2BPO75031 334 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 LCA5LO95447 670 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 PARP1P09874 1014 aaKnown RBP6.43□□□□□ -1.38
VPS33B-203ENST00000554264 RHOXF2BP0C7M4 288 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 GOLGA6DP0CG33 693 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 SCG2P13521 617 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 IFNGR1P15260 489 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 ANXA13P27216 316 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 SMARCA1P28370 1054 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 PLA2G5P39877 138 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 AFMP43652 599 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 GALK1P51570 392 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 CDR1P51861 262 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 JAG1P78504 1218 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 MTF1Q14872 753 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 KIR3DS1Q14943 382 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 SEPT2Q15019 361 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 PLCB4Q15147 1175 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 CLUL1Q15846 466 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 FXNQ16595 210 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 PFKFB3Q16875 520 aaPredicted RBP6.43□□□□□ -1.38
VPS33B-203ENST00000554264 OLFML2BQ68BL8 750 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 KLHL10Q6JEL2 608 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 CNNM4Q6P4Q7 775 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 CCNI2Q6ZMN8 369 aaPredicted RBP6.43□□□□□ -1.38
VPS33B-203ENST00000554264 CATSPERGQ6ZRH7 1159 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 MMS22LQ6ZRQ5 1243 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 DPP9Q86TI2 863 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 TADA2BQ86TJ2 420 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 MAPKAPK5Q8IW41 473 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 C10orf67Q8IYJ2 551 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 ARFGAP2Q8N6H7 521 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 ZNF713Q8N859 430 aaPredicted RBP6.43□□□□□ -1.38
VPS33B-203ENST00000554264 GIMAP8Q8ND71 665 aaPredicted RBP6.43□□□□□ -1.38
VPS33B-203ENST00000554264 PDZD8Q8NEN9 1154 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 NPLOC4Q8TAT6 608 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 TGFBRAP1Q8WUH2 860 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 NUP133Q8WUM0 1156 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 ATXN2LQ8WWM7 1075 aaKnown RBP6.43□□□□□ -1.38
VPS33B-203ENST00000554264 FAM168AQ92567 244 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 DHX38Q92620 1227 aaKnown RBP6.43□□□□□ -1.38
VPS33B-203ENST00000554264 SYN2Q92777 582 aaPredicted RBP6.43□□□□□ -1.38
VPS33B-203ENST00000554264 P3H4Q92791 437 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 FAM122AQ96E09 287 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 RCC1LQ96I51 464 aaKnown RBP6.43□□□□□ -1.38
VPS33B-203ENST00000554264 MAP6Q96JE9 813 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 MED15Q96RN5 788 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 RHOXF2Q9BQY4 288 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 ZNF287Q9HBT7 754 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 TOMM22Q9NS69 142 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 TCP11L1Q9NUJ3 509 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 GEMIN8Q9NWZ8 242 aaKnown RBP6.43□□□□□ -1.38
VPS33B-203ENST00000554264 ERVK13-1Q9NX77 482 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 GOLGA6AQ9NYA3 693 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.43□□□□□ -1.38
VPS33B-203ENST00000554264 CGGBP1Q9UFW8 167 aaPredicted RBP6.43□□□□□ -1.38
VPS33B-203ENST00000554264 ZMYM5Q9UJ78 669 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 KCNJ14Q9UNX9 436 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 HYOU1Q9Y4L1 999 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 FLT1P17948 1338 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 LTBP2Q14767 1821 aa6.43□□□□□ -1.38
VPS33B-203ENST00000554264 PVALEFA0A1B0GWK0 134 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 TRIM43BA6NCK2 446 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 PJA2O43164 708 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 PSPNO60542 156 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 PPM1BO75688 479 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 KIAA0754O94854 1291 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 GH2P01242 217 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 GSTM1P09488 218 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 CLTBP09497 229 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 TRIM21P19474 475 aaKnown RBP6.42□□□□□ -1.38
VPS33B-203ENST00000554264 RXRAP19793 462 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 CCNE1P24864 410 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 UBA7P41226 1012 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 ADCYAP1R1P41586 468 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 NOP2P46087 812 aaKnown RBP6.42□□□□□ -1.38
VPS33B-203ENST00000554264 NLRP5P59047 1200 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 TLE2Q04725 743 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 LRRC63Q05C16 580 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 GOLGA8FQ08AF8 430 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 GOLGA8DPQ0D2H9 430 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 TROAPQ12815 778 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 LRRC41Q15345 812 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 PKN1Q16512 942 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 SBK1Q52WX2 424 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 RRP12Q5JTH9 1297 aaKnown RBP6.42□□□□□ -1.38
VPS33B-203ENST00000554264 C10orf76Q5T2E6 689 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 CCDC181Q5TID7 509 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 LRRC31Q6UY01 552 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 CCDC91Q7Z6B0 441 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 DGKHQ86XP1 1220 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 RAB11FIP4Q86YS3 637 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 FMNL3Q8IVF7 1028 aa6.42□□□□□ -1.38
VPS33B-203ENST00000554264 CCDC50Q8IVM0 306 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms