RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 PIK3CAP42336 1068 aa10.02□□□□□ -0.8
SIX4-202ENST00000554079 TUBA1BP68363 451 aa10.02□□□□□ -0.8
SIX4-202ENST00000554079 FOXO4P98177 505 aa10.02□□□□□ -0.8
SIX4-202ENST00000554079 ATP1A4Q13733 1029 aa10.02□□□□□ -0.8
SIX4-202ENST00000554079 GK3PQ14409 553 aa10.02□□□□□ -0.8
SIX4-202ENST00000554079 SPCS2Q15005 226 aa10.02□□□□□ -0.8
SIX4-202ENST00000554079 SIX1Q15475 284 aaPredicted RBP10.02□□□□□ -0.8
SIX4-202ENST00000554079 TRIP10Q15642 601 aa10.02□□□□□ -0.8
SIX4-202ENST00000554079 TRIM71Q2Q1W2 868 aaKnown RBP10.02□□□□□ -0.8
SIX4-202ENST00000554079 EDRF1Q3B7T1 1238 aa10.02□□□□□ -0.8
SIX4-202ENST00000554079 DNAL1Q4LDG9 190 aa10.02□□□□□ -0.8
SIX4-202ENST00000554079 TUBA1AQ71U36 451 aa10.02□□□□□ -0.8
SIX4-202ENST00000554079 AMIGO2Q86SJ2 522 aa10.02□□□□□ -0.8
SIX4-202ENST00000554079 ITIH5Q86UX2 942 aa10.02□□□□□ -0.8
SIX4-202ENST00000554079 GRAMD2AQ8IUY3 354 aa10.02□□□□□ -0.8
SIX4-202ENST00000554079 RAVER1Q8IY67 606 aaKnown RBP10.02□□□□□ -0.8
SIX4-202ENST00000554079 GLIS3Q8NEA6 775 aa10.02□□□□□ -0.8
SIX4-202ENST00000554079 GSTCDQ8NEC7 633 aa10.02□□□□□ -0.8
SIX4-202ENST00000554079 TMIGD2Q96BF3 282 aa10.02□□□□□ -0.8
SIX4-202ENST00000554079 OXNAD1Q96HP4 312 aaPredicted RBP10.02□□□□□ -0.8
SIX4-202ENST00000554079 TRIM55Q9BYV6 548 aa10.02□□□□□ -0.8
SIX4-202ENST00000554079 PAIP1Q9H074 479 aaKnown RBP10.02□□□□□ -0.8
SIX4-202ENST00000554079 TRABDQ9H4I3 376 aa10.02□□□□□ -0.8
SIX4-202ENST00000554079 ZFYVE28Q9HCC9 887 aa10.02□□□□□ -0.8
SIX4-202ENST00000554079 GNPTGQ9UJJ9 305 aa10.02□□□□□ -0.8
SIX4-202ENST00000554079 APPL1Q9UKG1 709 aa10.02□□□□□ -0.8
SIX4-202ENST00000554079 CDH7Q9ULB5 785 aa10.02□□□□□ -0.8
SIX4-202ENST00000554079 RAB26Q9ULW5 256 aa10.02□□□□□ -0.8
SIX4-202ENST00000554079 COL4A3BPQ9Y5P4 624 aa10.02□□□□□ -0.8
SIX4-202ENST00000554079 RGPD8O14715 1765 aaPredicted RBP10.02□□□□□ -0.81
SIX4-202ENST00000554079 KIF1AQ12756 1690 aa10.02□□□□□ -0.81
SIX4-202ENST00000554079 TBKBP1A7MCY6 615 aa10.02□□□□□ -0.81
SIX4-202ENST00000554079 ERVV-2B6SEH9 535 aa10.02□□□□□ -0.81
SIX4-202ENST00000554079 MCF2LO15068 1137 aa10.02□□□□□ -0.81
SIX4-202ENST00000554079 CIITAP33076 1130 aa10.02□□□□□ -0.81
SIX4-202ENST00000554079 HNRNPFP52597 415 aaKnown RBP10.02□□□□□ -0.81
SIX4-202ENST00000554079 GALCP54803 685 aa10.02□□□□□ -0.81
SIX4-202ENST00000554079 C21orf59P57076 290 aa10.02□□□□□ -0.81
SIX4-202ENST00000554079 ZBTB16Q05516 673 aa10.02□□□□□ -0.81
SIX4-202ENST00000554079 PDE1CQ14123 709 aaPredicted RBP10.02□□□□□ -0.81
SIX4-202ENST00000554079 LVRNQ6Q4G3 990 aa10.02□□□□□ -0.81
SIX4-202ENST00000554079 ANKRD13BQ86YJ7 626 aa10.02□□□□□ -0.81
SIX4-202ENST00000554079 PROM2Q8N271 834 aa10.02□□□□□ -0.81
SIX4-202ENST00000554079 C12orf50Q8NA57 414 aaPredicted RBP10.02□□□□□ -0.81
SIX4-202ENST00000554079 GOLM1Q8NBJ4 401 aa10.02□□□□□ -0.81
SIX4-202ENST00000554079 LILRB4Q8NHJ6 448 aa10.02□□□□□ -0.81
SIX4-202ENST00000554079 RFFLQ8WZ73 363 aa10.02□□□□□ -0.81
SIX4-202ENST00000554079 OTUD5Q96G74 571 aa10.02□□□□□ -0.81
SIX4-202ENST00000554079 PSD2Q9BQI7 771 aa10.02□□□□□ -0.81
SIX4-202ENST00000554079 NMUR2Q9GZQ4 415 aa10.02□□□□□ -0.81
SIX4-202ENST00000554079 PALMDQ9NP74 551 aa10.02□□□□□ -0.81
SIX4-202ENST00000554079 TMOD2Q9NZR1 351 aa10.02□□□□□ -0.81
SIX4-202ENST00000554079 ARMCX1Q9P291 453 aa10.02□□□□□ -0.81
SIX4-202ENST00000554079 SEL1LQ9UBV2 794 aa10.02□□□□□ -0.81
SIX4-202ENST00000554079 EMSYQ7Z589 1322 aa10.02□□□□□ -0.81
SIX4-202ENST00000554079 RTL9Q8NET4 1388 aa10.01□□□□□ -0.81
SIX4-202ENST00000554079 A0A1B0GTW7 788 aa10.01□□□□□ -0.81
SIX4-202ENST00000554079 PLEKHG3A1L390 1219 aa10.01□□□□□ -0.81
SIX4-202ENST00000554079 EYA2O00167 538 aa10.01□□□□□ -0.81
SIX4-202ENST00000554079 IRS4O14654 1257 aaPredicted RBP10.01□□□□□ -0.81
SIX4-202ENST00000554079 SIN3BO75182 1162 aa10.01□□□□□ -0.81
SIX4-202ENST00000554079 GUCY1B2O75343 617 aa10.01□□□□□ -0.81
SIX4-202ENST00000554079 MTRF1O75570 445 aaKnown RBP10.01□□□□□ -0.81
SIX4-202ENST00000554079 PLEKHA8P1O95397 391 aa10.01□□□□□ -0.81
SIX4-202ENST00000554079 PRDX6P30041 224 aa10.01□□□□□ -0.81
SIX4-202ENST00000554079 HOXC9P31274 260 aa10.01□□□□□ -0.81
SIX4-202ENST00000554079 PCYT1AP49585 367 aa10.01□□□□□ -0.81
SIX4-202ENST00000554079 ARL4CP56559 192 aa10.01□□□□□ -0.81
SIX4-202ENST00000554079 FOXD4Q12950 439 aaPredicted RBP10.01□□□□□ -0.81
SIX4-202ENST00000554079 UBE4AQ14139 1066 aa10.01□□□□□ -0.81
SIX4-202ENST00000554079 Q3C1V9 767 aa10.01□□□□□ -0.81
SIX4-202ENST00000554079 EFHC1Q5JVL4 640 aa10.01□□□□□ -0.81
SIX4-202ENST00000554079 EGFLAMQ63HQ2 1017 aa10.01□□□□□ -0.81
SIX4-202ENST00000554079 TTC23LQ6PF05 361 aa10.01□□□□□ -0.81
SIX4-202ENST00000554079 USP43Q70EL4 1123 aa10.01□□□□□ -0.81
SIX4-202ENST00000554079 KSR1Q8IVT5 923 aa10.01□□□□□ -0.81
SIX4-202ENST00000554079 TRIM59Q8IWR1 403 aa10.01□□□□□ -0.81
SIX4-202ENST00000554079 REM2Q8IYK8 340 aaPredicted RBP10.01□□□□□ -0.81
SIX4-202ENST00000554079 SLC35G2Q8TBE7 412 aa10.01□□□□□ -0.81
SIX4-202ENST00000554079 TBC1D15Q8TC07 691 aa10.01□□□□□ -0.81
SIX4-202ENST00000554079 MED30Q96HR3 178 aa10.01□□□□□ -0.81
SIX4-202ENST00000554079 SPATA17Q96L03 361 aa10.01□□□□□ -0.81
SIX4-202ENST00000554079 POP1Q99575 1024 aaKnown RBP10.01□□□□□ -0.81
SIX4-202ENST00000554079 OLFM1Q99784 485 aa10.01□□□□□ -0.81
SIX4-202ENST00000554079 SLC2A11Q9BYW1 496 aa10.01□□□□□ -0.81
SIX4-202ENST00000554079 IRF2BPLQ9H1B7 796 aa10.01□□□□□ -0.81
SIX4-202ENST00000554079 Q9H521 79 aa10.01□□□□□ -0.81
SIX4-202ENST00000554079 KIAA1586Q9HCI6 787 aa10.01□□□□□ -0.81
SIX4-202ENST00000554079 VPS51Q9UID3 782 aa10.01□□□□□ -0.81
SIX4-202ENST00000554079 INPP5FQ9Y2H2 1132 aa10.01□□□□□ -0.81
SIX4-202ENST00000554079 PTPN22Q9Y2R2 807 aa10.01□□□□□ -0.81
SIX4-202ENST00000554079 RABGAP1Q9Y3P9 1069 aa10.01□□□□□ -0.81
SIX4-202ENST00000554079 CNTNAP5Q8WYK1 1306 aa10.01□□□□□ -0.81
SIX4-202ENST00000554079 TCRBV7S2A1N4TA0A589 114 aa10□□□□□ -0.81
SIX4-202ENST00000554079 KRBA1A5PL33 1030 aa10□□□□□ -0.81
SIX4-202ENST00000554079 H3BNX3 289 aa10□□□□□ -0.81
SIX4-202ENST00000554079 ALOX15BO15296 676 aa10□□□□□ -0.81
SIX4-202ENST00000554079 CCNT2O60583 730 aaKnown RBP10□□□□□ -0.81
SIX4-202ENST00000554079 FARP2O94887 1054 aaPredicted RBP10□□□□□ -0.81
SIX4-202ENST00000554079 ENO1P06733 434 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms