RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 PTPRJQ12913 1337 aa12.81□□□□□ -0.36
TRAPPC6B-204ENST00000554018 DCHS1Q96JQ0 3298 aa12.8□□□□□ -0.36
TRAPPC6B-204ENST00000554018 PTPRDP23468 1912 aa12.8□□□□□ -0.36
TRAPPC6B-204ENST00000554018 ANAPC1Q9H1A4 1944 aa12.8□□□□□ -0.36
TRAPPC6B-204ENST00000554018 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC6B-204ENST00000554018 SHISA7A6NL88 538 aa12.8□□□□□ -0.36
TRAPPC6B-204ENST00000554018 HEPACAM2A8MVW5 462 aa12.8□□□□□ -0.36
TRAPPC6B-204ENST00000554018 KRT19P08727 400 aa12.8□□□□□ -0.36
TRAPPC6B-204ENST00000554018 HAPLN1P10915 354 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC6B-204ENST00000554018 PDIA4P13667 645 aaKnown RBP12.8□□□□□ -0.36
TRAPPC6B-204ENST00000554018 PSMC3P17980 439 aa12.8□□□□□ -0.36
TRAPPC6B-204ENST00000554018 ATF6P18850 670 aa12.8□□□□□ -0.36
TRAPPC6B-204ENST00000554018 GDI1P31150 447 aa12.8□□□□□ -0.36
TRAPPC6B-204ENST00000554018 RBP5P82980 135 aa12.8□□□□□ -0.36
TRAPPC6B-204ENST00000554018 DNM1Q05193 864 aaKnown RBP12.8□□□□□ -0.36
TRAPPC6B-204ENST00000554018 BFSP1Q12934 665 aa12.8□□□□□ -0.36
TRAPPC6B-204ENST00000554018 MGAT5BQ3V5L5 792 aa12.8□□□□□ -0.36
TRAPPC6B-204ENST00000554018 FAM26FQ5R3K3 315 aa12.8□□□□□ -0.36
TRAPPC6B-204ENST00000554018 RESP18Q5W5W9 173 aa12.8□□□□□ -0.36
TRAPPC6B-204ENST00000554018 ITIH5Q86UX2 942 aa12.8□□□□□ -0.36
TRAPPC6B-204ENST00000554018 CBWD2Q8IUF1 395 aa12.8□□□□□ -0.36
TRAPPC6B-204ENST00000554018 C1orf210Q8IVY1 113 aa12.8□□□□□ -0.36
TRAPPC6B-204ENST00000554018 ZNF507Q8TCN5 953 aa12.8□□□□□ -0.36
TRAPPC6B-204ENST00000554018 GIPC2Q8TF65 315 aa12.8□□□□□ -0.36
TRAPPC6B-204ENST00000554018 DNASE1L2Q92874 299 aa12.8□□□□□ -0.36
TRAPPC6B-204ENST00000554018 NKD2Q969F2 451 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC6B-204ENST00000554018 MTMR12Q9C0I1 747 aa12.8□□□□□ -0.36
TRAPPC6B-204ENST00000554018 GPR88Q9GZN0 384 aa12.8□□□□□ -0.36
TRAPPC6B-204ENST00000554018 BLZF1Q9H2G9 400 aa12.8□□□□□ -0.36
TRAPPC6B-204ENST00000554018 ATXN3LQ9H3M9 355 aa12.8□□□□□ -0.36
TRAPPC6B-204ENST00000554018 LTB4R2Q9NPC1 389 aa12.8□□□□□ -0.36
TRAPPC6B-204ENST00000554018 TMLHEQ9NVH6 421 aa12.8□□□□□ -0.36
TRAPPC6B-204ENST00000554018 ABI2Q9NYB9 513 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC6B-204ENST00000554018 HSPBP1Q9NZL4 362 aa12.8□□□□□ -0.36
TRAPPC6B-204ENST00000554018 SIX4Q9UIU6 781 aa12.8□□□□□ -0.36
TRAPPC6B-204ENST00000554018 ITGA11Q9UKX5 1188 aa12.8□□□□□ -0.36
TRAPPC6B-204ENST00000554018 L1RE1Q9UN81 338 aa12.8□□□□□ -0.36
TRAPPC6B-204ENST00000554018 ZNF233A6NK53 670 aa12.79□□□□□ -0.36
TRAPPC6B-204ENST00000554018 KIAA0391O15091 583 aaKnown RBP12.79□□□□□ -0.36
TRAPPC6B-204ENST00000554018 EIF3DO15371 548 aaKnown RBP eCLIP12.79□□□□□ -0.36
TRAPPC6B-204ENST00000554018 HUS1O60921 280 aa12.79□□□□□ -0.36
TRAPPC6B-204ENST00000554018 TMEM191BP0C7N4 346 aa12.79□□□□□ -0.36
TRAPPC6B-204ENST00000554018 ACAT1P24752 427 aaKnown RBP12.79□□□□□ -0.36
TRAPPC6B-204ENST00000554018 TARSP26639 723 aaKnown RBP12.79□□□□□ -0.36
TRAPPC6B-204ENST00000554018 GABRR2P28476 465 aa12.79□□□□□ -0.36
TRAPPC6B-204ENST00000554018 TSPY1Q01534 308 aa12.79□□□□□ -0.36
TRAPPC6B-204ENST00000554018 ZNF852Q6ZMS4 543 aa12.79□□□□□ -0.36
TRAPPC6B-204ENST00000554018 UNC13DQ70J99 1090 aa12.79□□□□□ -0.36
TRAPPC6B-204ENST00000554018 OSTM1Q86WC4 334 aa12.79□□□□□ -0.36
TRAPPC6B-204ENST00000554018 MFSD6LQ8IWD5 586 aa12.79□□□□□ -0.36
TRAPPC6B-204ENST00000554018 GRAMD1CQ8IYS0 662 aa12.79□□□□□ -0.36
TRAPPC6B-204ENST00000554018 DCP1BQ8IZD4 617 aaKnown RBP12.79□□□□□ -0.36
TRAPPC6B-204ENST00000554018 MAML2Q8IZL2 1156 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC6B-204ENST00000554018 LRRC52Q8N7C0 313 aa12.79□□□□□ -0.36
TRAPPC6B-204ENST00000554018 OR5B17Q8NGF7 314 aa12.79□□□□□ -0.36
TRAPPC6B-204ENST00000554018 SPPL2BQ8TCT7 592 aa12.79□□□□□ -0.36
TRAPPC6B-204ENST00000554018 C2orf15Q8WU43 125 aaKnown RBP12.79□□□□□ -0.36
TRAPPC6B-204ENST00000554018 SCFD1Q8WVM8 642 aa12.79□□□□□ -0.36
TRAPPC6B-204ENST00000554018 IRF7Q92985 503 aa12.79□□□□□ -0.36
TRAPPC6B-204ENST00000554018 MKNK1Q9BUB5 465 aa12.79□□□□□ -0.36
TRAPPC6B-204ENST00000554018 BCO2Q9BYV7 579 aa12.79□□□□□ -0.36
TRAPPC6B-204ENST00000554018 OSBPL6Q9BZF3 934 aa12.79□□□□□ -0.36
TRAPPC6B-204ENST00000554018 MAGEF1Q9HAY2 307 aa12.79□□□□□ -0.36
TRAPPC6B-204ENST00000554018 INTS13Q9NVM9 706 aa12.79□□□□□ -0.36
TRAPPC6B-204ENST00000554018 SPATA6Q9NWH7 488 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC6B-204ENST00000554018 FAM13BQ9NYF5 915 aa12.79□□□□□ -0.36
TRAPPC6B-204ENST00000554018 RCOR1Q9UKL0 485 aa12.79□□□□□ -0.36
TRAPPC6B-204ENST00000554018 CFAP45Q9UL16 551 aa12.79□□□□□ -0.36
TRAPPC6B-204ENST00000554018 SNX9Q9Y5X1 595 aa12.79□□□□□ -0.36
TRAPPC6B-204ENST00000554018 R4GN57 208 aa12.79□□□□□ -0.36
TRAPPC6B-204ENST00000554018 ZNF263O14978 683 aa12.78□□□□□ -0.36
TRAPPC6B-204ENST00000554018 CLIC2O15247 247 aa12.78□□□□□ -0.36
TRAPPC6B-204ENST00000554018 TGFB1I1O43294 461 aa12.78□□□□□ -0.36
TRAPPC6B-204ENST00000554018 FGF19O95750 216 aa12.78□□□□□ -0.36
TRAPPC6B-204ENST00000554018 SP9P0CG40 484 aa12.78□□□□□ -0.36
TRAPPC6B-204ENST00000554018 AFMP43652 599 aa12.78□□□□□ -0.36
TRAPPC6B-204ENST00000554018 GPR15P49685 360 aa12.78□□□□□ -0.36
TRAPPC6B-204ENST00000554018 CYP4F8P98187 520 aa12.78□□□□□ -0.36
TRAPPC6B-204ENST00000554018 EHHADHQ08426 723 aa12.78□□□□□ -0.36
TRAPPC6B-204ENST00000554018 SMARCB1Q12824 385 aa12.78□□□□□ -0.36
TRAPPC6B-204ENST00000554018 FZD5Q13467 585 aa12.78□□□□□ -0.36
TRAPPC6B-204ENST00000554018 CUL4BQ13620 913 aa12.78□□□□□ -0.36
TRAPPC6B-204ENST00000554018 VEPH1Q14D04 833 aa12.78□□□□□ -0.36
TRAPPC6B-204ENST00000554018 TAF12Q16514 161 aa12.78□□□□□ -0.36
TRAPPC6B-204ENST00000554018 DUOXA2Q1HG44 320 aa12.78□□□□□ -0.36
TRAPPC6B-204ENST00000554018 GPR158Q5T848 1215 aa12.78□□□□□ -0.36
TRAPPC6B-204ENST00000554018 ATL3Q6DD88 541 aa12.78□□□□□ -0.36
TRAPPC6B-204ENST00000554018 ARID3BQ8IVW6 561 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC6B-204ENST00000554018 NELFCDQ8IXH7 590 aa12.78□□□□□ -0.36
TRAPPC6B-204ENST00000554018 RDH13Q8NBN7 331 aa12.78□□□□□ -0.36
TRAPPC6B-204ENST00000554018 DEPDC1BQ8WUY9 529 aa12.78□□□□□ -0.36
TRAPPC6B-204ENST00000554018 E2F7Q96AV8 911 aa12.78□□□□□ -0.36
TRAPPC6B-204ENST00000554018 CLDN23Q96B33 292 aa12.78□□□□□ -0.36
TRAPPC6B-204ENST00000554018 ANKRD36BP1Q96IX9 119 aa12.78□□□□□ -0.36
TRAPPC6B-204ENST00000554018 CHAMP1Q96JM3 812 aa12.78□□□□□ -0.36
TRAPPC6B-204ENST00000554018 LRRC3BQ96PB8 259 aa12.78□□□□□ -0.36
TRAPPC6B-204ENST00000554018 NELL2Q99435 816 aa12.78□□□□□ -0.36
TRAPPC6B-204ENST00000554018 ACBD6Q9BR61 282 aa12.78□□□□□ -0.36
TRAPPC6B-204ENST00000554018 PI4K2AQ9BTU6 479 aa12.78□□□□□ -0.36
TRAPPC6B-204ENST00000554018 IL21Q9HBE4 155 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms