RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 PIGRP01833 764 aa10.69□□□□□ -0.7
ACTN1-210ENST00000553779 RETP07949 1114 aa10.69□□□□□ -0.7
ACTN1-210ENST00000553779 TFAMQ00059 246 aaKnown RBP10.69□□□□□ -0.7
ACTN1-210ENST00000553779 FCHO2Q0JRZ9 810 aa10.69□□□□□ -0.7
ACTN1-210ENST00000553779 SMARCB1Q12824 385 aa10.69□□□□□ -0.7
ACTN1-210ENST00000553779 ZBTB6Q15916 424 aa10.69□□□□□ -0.7
ACTN1-210ENST00000553779 POTEHQ6S545 545 aa10.69□□□□□ -0.7
ACTN1-210ENST00000553779 Q6ZS52 159 aa10.69□□□□□ -0.7
ACTN1-210ENST00000553779 GAREM2Q75VX8 874 aa10.69□□□□□ -0.7
ACTN1-210ENST00000553779 DYMQ7RTS9 669 aa10.69□□□□□ -0.7
ACTN1-210ENST00000553779 OR10T2Q8NGX3 314 aa10.69□□□□□ -0.7
ACTN1-210ENST00000553779 SPPL2BQ8TCT7 592 aa10.69□□□□□ -0.7
ACTN1-210ENST00000553779 MRPS31Q92665 395 aaKnown RBP10.69□□□□□ -0.7
ACTN1-210ENST00000553779 EXOC4Q96A65 974 aa10.69□□□□□ -0.7
ACTN1-210ENST00000553779 RSPRY1Q96DX4 576 aa10.69□□□□□ -0.7
ACTN1-210ENST00000553779 KIF2CQ99661 725 aa10.69□□□□□ -0.7
ACTN1-210ENST00000553779 RTKNQ9BST9 563 aa10.69□□□□□ -0.7
ACTN1-210ENST00000553779 SMG9Q9H0W8 520 aaKnown RBP10.69□□□□□ -0.7
ACTN1-210ENST00000553779 ASB7Q9H672 318 aa10.69□□□□□ -0.7
ACTN1-210ENST00000553779 TASP1Q9H6P5 420 aa10.69□□□□□ -0.7
ACTN1-210ENST00000553779 GTSE1Q9NYZ3 720 aa10.69□□□□□ -0.7
ACTN1-210ENST00000553779 ZMYM5Q9UJ78 669 aa10.69□□□□□ -0.7
ACTN1-210ENST00000553779 CPSF3Q9UKF6 684 aaKnown RBP10.69□□□□□ -0.7
ACTN1-210ENST00000553779 SLC8A2Q9UPR5 921 aa10.69□□□□□ -0.7
ACTN1-210ENST00000553779 C2CD2Q9Y426 696 aa10.69□□□□□ -0.7
ACTN1-210ENST00000553779 PCDHB5Q9Y5E4 795 aa10.69□□□□□ -0.7
ACTN1-210ENST00000553779 GON4LQ3T8J9 2241 aa10.68□□□□□ -0.7
ACTN1-210ENST00000553779 NCANO14594 1321 aa10.68□□□□□ -0.7
ACTN1-210ENST00000553779 CEP295Q9C0D2 2601 aa10.68□□□□□ -0.7
ACTN1-210ENST00000553779 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.68□□□□□ -0.7
ACTN1-210ENST00000553779 DCDC2BA2VCK2 349 aa10.68□□□□□ -0.7
ACTN1-210ENST00000553779 HUS1O60921 280 aa10.68□□□□□ -0.7
ACTN1-210ENST00000553779 LRP3O75074 770 aa10.68□□□□□ -0.7
ACTN1-210ENST00000553779 PRPF40AO75400 957 aaKnown RBP10.68□□□□□ -0.7
ACTN1-210ENST00000553779 VNN2O95498 520 aa10.68□□□□□ -0.7
ACTN1-210ENST00000553779 PRAMEF12O95522 483 aa10.68□□□□□ -0.7
ACTN1-210ENST00000553779 KRT19P08727 400 aa10.68□□□□□ -0.7
ACTN1-210ENST00000553779 CCDC192P0DO97 292 aa10.68□□□□□ -0.7
ACTN1-210ENST00000553779 CHRNB1P11230 501 aa10.68□□□□□ -0.7
ACTN1-210ENST00000553779 CNR2P34972 360 aa10.68□□□□□ -0.7
ACTN1-210ENST00000553779 PNPLA4P41247 253 aa10.68□□□□□ -0.7
ACTN1-210ENST00000553779 ZNF131P52739 623 aa10.68□□□□□ -0.7
ACTN1-210ENST00000553779 ATXN1P54253 815 aaKnown RBP10.68□□□□□ -0.7
ACTN1-210ENST00000553779 MLLT6P55198 1093 aaPredicted RBP10.68□□□□□ -0.7
ACTN1-210ENST00000553779 AMPD2Q01433 879 aa10.68□□□□□ -0.7
ACTN1-210ENST00000553779 GRSF1Q12849 480 aaKnown RBP eCLIP10.68□□□□□ -0.7
ACTN1-210ENST00000553779 FZD5Q13467 585 aa10.68□□□□□ -0.7
ACTN1-210ENST00000553779 POSTNQ15063 836 aa10.68□□□□□ -0.7
ACTN1-210ENST00000553779 SF3A1Q15459 793 aaKnown RBP10.68□□□□□ -0.7
ACTN1-210ENST00000553779 C8orf34Q49A92 452 aa10.68□□□□□ -0.7
ACTN1-210ENST00000553779 AASDHQ4L235 1098 aaPredicted RBP10.68□□□□□ -0.7
ACTN1-210ENST00000553779 ZC2HC1CQ53FD0 456 aaPredicted RBP10.68□□□□□ -0.7
ACTN1-210ENST00000553779 LONP2Q86WA8 852 aa10.68□□□□□ -0.7
ACTN1-210ENST00000553779 SFR1Q86XK3 245 aa10.68□□□□□ -0.7
ACTN1-210ENST00000553779 C12orf50Q8NA57 414 aaPredicted RBP10.68□□□□□ -0.7
ACTN1-210ENST00000553779 NETO1Q8TDF5 533 aa10.68□□□□□ -0.7
ACTN1-210ENST00000553779 CACTINQ8WUQ7 758 aaKnown RBP10.68□□□□□ -0.7
ACTN1-210ENST00000553779 NELL1Q92832 810 aa10.68□□□□□ -0.7
ACTN1-210ENST00000553779 HVCN1Q96D96 273 aa10.68□□□□□ -0.7
ACTN1-210ENST00000553779 FAM213AQ9BRX8 229 aa10.68□□□□□ -0.7
ACTN1-210ENST00000553779 ZCWPW1Q9H0M4 648 aa10.68□□□□□ -0.7
ACTN1-210ENST00000553779 TRPC7Q9HCX4 862 aa10.68□□□□□ -0.7
ACTN1-210ENST00000553779 OBP2AQ9NY56 170 aa10.68□□□□□ -0.7
ACTN1-210ENST00000553779 TBC1D7Q9P0N9 293 aa10.68□□□□□ -0.7
ACTN1-210ENST00000553779 HSFX1Q9UBD0 423 aa10.68□□□□□ -0.7
ACTN1-210ENST00000553779 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.68□□□□□ -0.7
ACTN1-210ENST00000553779 LAMA1P25391 3075 aa10.67□□□□□ -0.7
ACTN1-210ENST00000553779 CEP192Q8TEP8 1941 aa10.67□□□□□ -0.7
ACTN1-210ENST00000553779 MYBPHLA2RUH7 354 aa10.67□□□□□ -0.7
ACTN1-210ENST00000553779 KPNA7A9QM74 516 aa10.67□□□□□ -0.7
ACTN1-210ENST00000553779 TISP43B9A030 160 aa10.67□□□□□ -0.7
ACTN1-210ENST00000553779 ANKRD63C9JTQ0 380 aa10.67□□□□□ -0.7
ACTN1-210ENST00000553779 ARNTLO00327 626 aa10.67□□□□□ -0.7
ACTN1-210ENST00000553779 PIRO00625 290 aa10.67□□□□□ -0.7
ACTN1-210ENST00000553779 FAM189A1O60320 539 aa10.67□□□□□ -0.7
ACTN1-210ENST00000553779 FOXD2O60548 495 aaPredicted RBP10.67□□□□□ -0.7
ACTN1-210ENST00000553779 ATG13O75143 517 aa10.67□□□□□ -0.7
ACTN1-210ENST00000553779 GCNT3O95395 438 aa10.67□□□□□ -0.7
ACTN1-210ENST00000553779 CYP11A1P05108 521 aa10.67□□□□□ -0.7
ACTN1-210ENST00000553779 TMEM191BP0C7N4 346 aa10.67□□□□□ -0.7
ACTN1-210ENST00000553779 IDEP14735 1019 aa10.67□□□□□ -0.7
ACTN1-210ENST00000553779 GAP43P17677 238 aa10.67□□□□□ -0.7
ACTN1-210ENST00000553779 ATF6P18850 670 aa10.67□□□□□ -0.7
ACTN1-210ENST00000553779 PDCP20941 246 aa10.67□□□□□ -0.7
ACTN1-210ENST00000553779 DDX6P26196 483 aaKnown RBP eCLIP10.67□□□□□ -0.7
ACTN1-210ENST00000553779 DDIT3P35638 169 aa10.67□□□□□ -0.7
ACTN1-210ENST00000553779 GTF2BQ00403 316 aa10.67□□□□□ -0.7
ACTN1-210ENST00000553779 MYL7Q01449 175 aa10.67□□□□□ -0.7
ACTN1-210ENST00000553779 TNK2Q07912 1038 aa10.67□□□□□ -0.7
ACTN1-210ENST00000553779 SRSF5Q13243 272 aaKnown RBP10.67□□□□□ -0.7
ACTN1-210ENST00000553779 NFE2Q16621 373 aaPredicted RBP10.67□□□□□ -0.7
ACTN1-210ENST00000553779 RRAGBQ5VZM2 374 aa10.67□□□□□ -0.7
ACTN1-210ENST00000553779 WSCD1Q658N2 575 aa10.67□□□□□ -0.7
ACTN1-210ENST00000553779 IL31Q6EBC2 164 aa10.67□□□□□ -0.7
ACTN1-210ENST00000553779 SLC39A4Q6P5W5 647 aa10.67□□□□□ -0.7
ACTN1-210ENST00000553779 MAB21L3Q8N8X9 362 aa10.67□□□□□ -0.7
ACTN1-210ENST00000553779 SAAL1Q96ER3 474 aa10.67□□□□□ -0.7
ACTN1-210ENST00000553779 ACCSQ96QU6 501 aa10.67□□□□□ -0.7
ACTN1-210ENST00000553779 PI4K2AQ9BTU6 479 aa10.67□□□□□ -0.7
ACTN1-210ENST00000553779 LRRC3Q9BY71 257 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms