RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 AP3M2P53677 418 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 FBXO31Q5XUX0 539 aaPredicted RBP9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 ATG16L1Q676U5 607 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 EFCAB3Q8N7B9 438 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 GRAMD1AQ96CP6 724 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 ACTR3BQ9P1U1 418 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 UNC13AQ9UPW8 1703 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 TRAV20A0A0B4J274 112 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 MEN1O00255 615 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 PARNO95453 639 aaKnown RBP9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 RAG1P15918 1043 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 PLCG1P19174 1290 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 GSTO1P78417 241 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 KIZQ2M2Z5 673 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 BORAQ6PGQ7 559 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 MPRIPQ6WCQ1 1025 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 IFNEQ86WN2 208 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 TSPAN14Q8NG11 270 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 ELMO1Q92556 727 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 PLEKHA8Q96JA3 519 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 SCPEP1Q9HB40 452 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 CARMIL3Q8ND23 1372 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 PITPNM2Q9BZ72 1349 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 CLOCKO15516 846 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 PEX11AO75192 247 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 WFS1O76024 890 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 AGTP01019 485 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 RPN1P04843 607 aaKnown RBP9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 DEFA1P59665 94 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 DEFA3P59666 94 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 NR5A1Q13285 461 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 SLC29A2Q14542 456 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 PYHIN1Q6K0P9 492 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 TRMT2AQ8IZ69 625 aaKnown RBP9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 OR8H2Q8N162 312 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 TBC1D19Q8N5T2 526 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 ANKS1AQ92625 1134 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 TRIM43Q96BQ3 446 aaPredicted RBP9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 WRNIP1Q96S55 665 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 IL25Q9H293 177 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 KANSL2Q9H9L4 492 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 AGPAT5Q9NUQ2 364 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 UVRAGQ9P2Y5 699 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 LRRC42Q9Y546 428 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 ST14Q9Y5Y6 855 aa9.39□□□□□ -0.91
GTF2A1-203ENST00000553612 A0A0G2JPF8 293 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 A8MUA0 341 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 HNRNPCL3B7ZW38 293 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 PDE2AO00408 941 aaPredicted RBP9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 PAHP00439 452 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 HNRNPCL4P0DMR1 293 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 TCHHL1Q5QJ38 904 aaPredicted RBP9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 HECTD3Q5T447 861 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 RAPGEF4Q8WZA2 1011 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 CAVIN3Q969G5 261 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 POLE4Q9NR33 117 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 HESX1Q9UBX0 185 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 POU2F3Q9UKI9 436 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 E2F8A0AVK6 867 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 TRPC5OSA6NMA1 111 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 HDAC3O15379 428 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 OR5F1O95221 314 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 ZAP70P43403 619 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 GPSM2P81274 684 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 SETD3Q86TU7 594 aaPredicted RBP9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 SPATA5Q8NB90 893 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 TEX13BQ9BXU2 312 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 LOC100653049A0A140TA62 436 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 ESYT2A0FGR8 921 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 O00370 1275 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 DYNC1LI2O43237 492 aaPredicted RBP9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 KRT34O76011 436 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 CEBPAP49715 358 aaPredicted RBP9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 DNM2P50570 870 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 ERVK-24P63145 666 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 VAC14Q08AM6 782 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 ZNF425Q6IV72 752 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 PRUNE1Q86TP1 453 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 LILRB1Q8NHL6 650 aaPredicted RBP9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 BTBD10Q9BSF8 475 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 MYOCOSA0A1B0GUC4 107 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 CCNT1O60563 726 aaKnown RBP9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 PDIA3P30101 505 aaKnown RBP9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 NRF1Q16656 503 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 MB21D1Q8N884 522 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 TUBA1CQ9BQE3 449 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 IDI2Q9BXS1 227 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 TP63Q9H3D4 680 aaPredicted RBP9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 ARMCX1Q9P291 453 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 WBP11Q9Y2W2 641 aaKnown RBP9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 MAGEB16A2A368 324 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 EIF2AK2P19525 551 aaKnown RBP9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 BFSP2Q13515 415 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 OR52E8Q6IFG1 317 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 LINC00469Q8N7U9 141 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 ALKBH8Q96BT7 664 aaKnown RBP9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 MOV10Q9HCE1 1003 aaKnown RBP9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 THAP1Q9NVV9 213 aa9.38□□□□□ -0.91
GTF2A1-203ENST00000553612 LIMA1Q9UHB6 759 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms