RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 TTC8Q8TAM2 541 aa10.73□□□□□ -0.69
ACTN1-208ENST00000553370 SENP8Q96LD8 212 aa10.73□□□□□ -0.69
ACTN1-208ENST00000553370 TSPAN18Q96SJ8 248 aa10.73□□□□□ -0.69
ACTN1-208ENST00000553370 PYM1Q9BRP8 204 aaKnown RBP10.73□□□□□ -0.69
ACTN1-208ENST00000553370 NTPCRQ9BSD7 190 aaKnown RBP10.73□□□□□ -0.69
ACTN1-208ENST00000553370 C8orf33Q9H7E9 229 aaPredicted RBP10.73□□□□□ -0.69
ACTN1-208ENST00000553370 THG1LQ9NWX6 298 aaKnown RBP10.73□□□□□ -0.69
ACTN1-208ENST00000553370 DSEQ9UL01 958 aa10.73□□□□□ -0.69
ACTN1-208ENST00000553370 R3HCC1Q9Y3T6 440 aaKnown RBP10.73□□□□□ -0.69
ACTN1-208ENST00000553370 ASB3Q9Y575 518 aa10.73□□□□□ -0.69
ACTN1-208ENST00000553370 EML5Q05BV3 1969 aa10.73□□□□□ -0.69
ACTN1-208ENST00000553370 NUP205Q92621 2012 aa10.73□□□□□ -0.69
ACTN1-208ENST00000553370 DNAH14Q0VDD8 3507 aa10.72□□□□□ -0.69
ACTN1-208ENST00000553370 MTMR11A4FU01 709 aa10.72□□□□□ -0.69
ACTN1-208ENST00000553370 CHADO15335 359 aa10.72□□□□□ -0.69
ACTN1-208ENST00000553370 MEFVO15553 781 aaPredicted RBP10.72□□□□□ -0.69
ACTN1-208ENST00000553370 SOAT2O75908 522 aa10.72□□□□□ -0.69
ACTN1-208ENST00000553370 NFICP08651 508 aa10.72□□□□□ -0.69
ACTN1-208ENST00000553370 PLCG1P19174 1290 aa10.72□□□□□ -0.69
ACTN1-208ENST00000553370 TYMPP19971 482 aa10.72□□□□□ -0.69
ACTN1-208ENST00000553370 PAX3P23760 479 aa10.72□□□□□ -0.69
ACTN1-208ENST00000553370 CDC25CP30307 473 aa10.72□□□□□ -0.69
ACTN1-208ENST00000553370 TXLNAP40222 546 aa10.72□□□□□ -0.69
ACTN1-208ENST00000553370 CDR1P51861 262 aa10.72□□□□□ -0.69
ACTN1-208ENST00000553370 EPHA5P54756 1037 aa10.72□□□□□ -0.69
ACTN1-208ENST00000553370 SIM2Q14190 667 aaPredicted RBP10.72□□□□□ -0.69
ACTN1-208ENST00000553370 PTPAQ15257 358 aa10.72□□□□□ -0.69
ACTN1-208ENST00000553370 ARHGAP29Q52LW3 1261 aa10.72□□□□□ -0.69
ACTN1-208ENST00000553370 LAIR1Q6GTX8 287 aa10.72□□□□□ -0.69
ACTN1-208ENST00000553370 MAP4K3Q8IVH8 894 aa10.72□□□□□ -0.69
ACTN1-208ENST00000553370 TMEM130Q8N3G9 435 aa10.72□□□□□ -0.69
ACTN1-208ENST00000553370 ZNF560Q96MR9 790 aa10.72□□□□□ -0.69
ACTN1-208ENST00000553370 TRPV4Q9HBA0 871 aa10.72□□□□□ -0.69
ACTN1-208ENST00000553370 ABI2Q9NYB9 513 aaPredicted RBP10.72□□□□□ -0.69
ACTN1-208ENST00000553370 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.72□□□□□ -0.69
ACTN1-208ENST00000553370 THADAQ6YHU6 1953 aa10.72□□□□□ -0.69
ACTN1-208ENST00000553370 VPS37CA5D8V6 355 aaPredicted RBP10.71□□□□□ -0.69
ACTN1-208ENST00000553370 SMAPO00193 183 aa10.71□□□□□ -0.69
ACTN1-208ENST00000553370 PPEF2O14830 753 aa10.71□□□□□ -0.69
ACTN1-208ENST00000553370 LILRB5O75023 590 aa10.71□□□□□ -0.69
ACTN1-208ENST00000553370 MOSPD3O75425 235 aa10.71□□□□□ -0.69
ACTN1-208ENST00000553370 NMT1P30419 496 aaKnown RBP10.71□□□□□ -0.69
ACTN1-208ENST00000553370 AVPR1AP37288 418 aa10.71□□□□□ -0.69
ACTN1-208ENST00000553370 SOX9P48436 509 aa10.71□□□□□ -0.69
ACTN1-208ENST00000553370 TUFMP49411 452 aaKnown RBP10.71□□□□□ -0.69
ACTN1-208ENST00000553370 ACOT2P49753 483 aa10.71□□□□□ -0.69
ACTN1-208ENST00000553370 TAF6P49848 677 aa10.71□□□□□ -0.69
ACTN1-208ENST00000553370 LILRA4P59901 499 aa10.71□□□□□ -0.69
ACTN1-208ENST00000553370 USP46P62068 366 aa10.71□□□□□ -0.69
ACTN1-208ENST00000553370 CYP4F8P98187 520 aa10.71□□□□□ -0.69
ACTN1-208ENST00000553370 TSPY1Q01534 308 aa10.71□□□□□ -0.69
ACTN1-208ENST00000553370 SATB1Q01826 763 aa10.71□□□□□ -0.69
ACTN1-208ENST00000553370 SPEM2Q0P670 501 aa10.71□□□□□ -0.69
ACTN1-208ENST00000553370 BFSP1Q12934 665 aa10.71□□□□□ -0.69
ACTN1-208ENST00000553370 KARSQ15046 597 aaKnown RBP10.71□□□□□ -0.69
ACTN1-208ENST00000553370 SV2CQ496J9 727 aa10.71□□□□□ -0.69
ACTN1-208ENST00000553370 DGKKQ5KSL6 1271 aa10.71□□□□□ -0.69
ACTN1-208ENST00000553370 STXBP5Q5T5C0 1151 aa10.71□□□□□ -0.69
ACTN1-208ENST00000553370 SPATA1Q5VX52 437 aa10.71□□□□□ -0.69
ACTN1-208ENST00000553370 C9orf57Q5W0N0 161 aa10.71□□□□□ -0.69
ACTN1-208ENST00000553370 LARP1BQ659C4 914 aaKnown RBP10.71□□□□□ -0.69
ACTN1-208ENST00000553370 SLFN12LQ6IEE8 588 aa10.71□□□□□ -0.69
ACTN1-208ENST00000553370 CENPPQ6IPU0 288 aa10.71□□□□□ -0.69
ACTN1-208ENST00000553370 KIAA1549LQ6ZVL6 1849 aa10.71□□□□□ -0.69
ACTN1-208ENST00000553370 DNAJB7Q7Z6W7 309 aaPredicted RBP10.71□□□□□ -0.69
ACTN1-208ENST00000553370 ARID3BQ8IVW6 561 aaPredicted RBP10.71□□□□□ -0.69
ACTN1-208ENST00000553370 SPEM1Q8N4L4 309 aa10.71□□□□□ -0.69
ACTN1-208ENST00000553370 TTC9BQ8N6N2 239 aa10.71□□□□□ -0.69
ACTN1-208ENST00000553370 CELF5Q8N6W0 485 aaKnown RBP10.71□□□□□ -0.69
ACTN1-208ENST00000553370 ATAD1Q8NBU5 361 aa10.71□□□□□ -0.69
ACTN1-208ENST00000553370 POMGNT1Q8WZA1 660 aa10.71□□□□□ -0.69
ACTN1-208ENST00000553370 LARP4BQ92615 738 aaKnown RBP10.71□□□□□ -0.69
ACTN1-208ENST00000553370 RAD54LQ92698 747 aa10.71□□□□□ -0.69
ACTN1-208ENST00000553370 PSMG2Q969U7 264 aa10.71□□□□□ -0.69
ACTN1-208ENST00000553370 TMX3Q96JJ7 454 aa10.71□□□□□ -0.69
ACTN1-208ENST00000553370 ZFYVE19Q96K21 471 aa10.71□□□□□ -0.69
ACTN1-208ENST00000553370 LPIN3Q9BQK8 851 aa10.71□□□□□ -0.69
ACTN1-208ENST00000553370 HAPLN2Q9GZV7 340 aa10.71□□□□□ -0.69
ACTN1-208ENST00000553370 TRPV5Q9NQA5 729 aa10.71□□□□□ -0.69
ACTN1-208ENST00000553370 AGO2Q9UKV8 859 aaKnown RBP10.71□□□□□ -0.69
ACTN1-208ENST00000553370 DERAQ9Y315 318 aa10.71□□□□□ -0.69
ACTN1-208ENST00000553370 MYOFQ9NZM1 2061 aa10.7□□□□□ -0.7
ACTN1-208ENST00000553370 PTPRDP23468 1912 aa10.7□□□□□ -0.7
ACTN1-208ENST00000553370 A0A0B4J269 797 aa10.7□□□□□ -0.7
ACTN1-208ENST00000553370 CHURC1-FNTBB4DL54 471 aa10.7□□□□□ -0.7
ACTN1-208ENST00000553370 SPECC1L-ADORA2AF8WAN1 911 aa10.7□□□□□ -0.7
ACTN1-208ENST00000553370 NRG2O14511 850 aaPredicted RBP10.7□□□□□ -0.7
ACTN1-208ENST00000553370 CYB561D2O14569 222 aa10.7□□□□□ -0.7
ACTN1-208ENST00000553370 CTHP32929 405 aa10.7□□□□□ -0.7
ACTN1-208ENST00000553370 LONP1P36776 959 aaKnown RBP10.7□□□□□ -0.7
ACTN1-208ENST00000553370 FNTBP49356 437 aa10.7□□□□□ -0.7
ACTN1-208ENST00000553370 AARSP49588 968 aaKnown RBP eCLIP10.7□□□□□ -0.7
ACTN1-208ENST00000553370 MCM2P49736 904 aa10.7□□□□□ -0.7
ACTN1-208ENST00000553370 PON2Q15165 354 aa10.7□□□□□ -0.7
ACTN1-208ENST00000553370 ITPRIPL2Q3MIP1 535 aa10.7□□□□□ -0.7
ACTN1-208ENST00000553370 ARSHQ5FYA8 562 aa10.7□□□□□ -0.7
ACTN1-208ENST00000553370 CC2D1AQ6P1N0 951 aaPredicted RBP10.7□□□□□ -0.7
ACTN1-208ENST00000553370 BRAPQ7Z569 592 aa10.7□□□□□ -0.7
ACTN1-208ENST00000553370 RALGPS2Q86X27 583 aaPredicted RBP10.7□□□□□ -0.7
ACTN1-208ENST00000553370 TMC8Q8IU68 726 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms