RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 TMEM150AQ86TG1 271 aa9.84□□□□□ -0.83
SYNE2-209ENST00000553308 CMTM8Q8IZV2 173 aa9.84□□□□□ -0.83
SYNE2-209ENST00000553308 MAB21L3Q8N8X9 362 aa9.84□□□□□ -0.83
SYNE2-209ENST00000553308 SYT2Q8N9I0 419 aaPredicted RBP9.84□□□□□ -0.83
SYNE2-209ENST00000553308 STKLD1Q8NE28 680 aa9.84□□□□□ -0.83
SYNE2-209ENST00000553308 USP13Q92995 863 aaPredicted RBP9.84□□□□□ -0.83
SYNE2-209ENST00000553308 FAM212AQ96EL1 285 aa9.84□□□□□ -0.83
SYNE2-209ENST00000553308 ZC3H10Q96K80 434 aaKnown RBP9.84□□□□□ -0.83
SYNE2-209ENST00000553308 PNMA5Q96PV4 448 aa9.84□□□□□ -0.83
SYNE2-209ENST00000553308 EDEM2Q9BV94 578 aa9.84□□□□□ -0.83
SYNE2-209ENST00000553308 ZCWPW1Q9H0M4 648 aa9.84□□□□□ -0.83
SYNE2-209ENST00000553308 DUSP15Q9H1R2 295 aaPredicted RBP9.84□□□□□ -0.83
SYNE2-209ENST00000553308 RPF1Q9H9Y2 349 aaKnown RBP9.84□□□□□ -0.83
SYNE2-209ENST00000553308 FBRSL1Q9HCM7 1045 aaKnown RBP9.84□□□□□ -0.83
SYNE2-209ENST00000553308 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.84□□□□□ -0.83
SYNE2-209ENST00000553308 OBSL1O75147 1896 aa9.84□□□□□ -0.83
SYNE2-209ENST00000553308 ATG2BQ96BY7 2078 aa9.83□□□□□ -0.84
SYNE2-209ENST00000553308 C1QTNF9BB2RNN3 333 aa9.83□□□□□ -0.84
SYNE2-209ENST00000553308 GIPC1O14908 333 aa9.83□□□□□ -0.84
SYNE2-209ENST00000553308 HNRNPDLO14979 420 aaKnown RBP9.83□□□□□ -0.84
SYNE2-209ENST00000553308 DCLK1O15075 740 aa9.83□□□□□ -0.84
SYNE2-209ENST00000553308 ATG13O75143 517 aa9.83□□□□□ -0.84
SYNE2-209ENST00000553308 CYP11A1P05108 521 aa9.83□□□□□ -0.84
SYNE2-209ENST00000553308 PROS1P07225 676 aa9.83□□□□□ -0.84
SYNE2-209ENST00000553308 ADRB2P07550 413 aa9.83□□□□□ -0.84
SYNE2-209ENST00000553308 C1QTNF9P0C862 333 aa9.83□□□□□ -0.84
SYNE2-209ENST00000553308 AVPR1AP37288 418 aa9.83□□□□□ -0.84
SYNE2-209ENST00000553308 PRPHP41219 470 aa9.83□□□□□ -0.84
SYNE2-209ENST00000553308 TUFMP49411 452 aaKnown RBP9.83□□□□□ -0.84
SYNE2-209ENST00000553308 NOVA1P51513 510 aaKnown RBP9.83□□□□□ -0.84
SYNE2-209ENST00000553308 NLRP12P59046 1061 aa9.83□□□□□ -0.84
SYNE2-209ENST00000553308 BFSP1Q12934 665 aa9.83□□□□□ -0.84
SYNE2-209ENST00000553308 PTPAQ15257 358 aa9.83□□□□□ -0.84
SYNE2-209ENST00000553308 TAF12Q16514 161 aa9.83□□□□□ -0.84
SYNE2-209ENST00000553308 HYIQ5T013 277 aa9.83□□□□□ -0.84
SYNE2-209ENST00000553308 TXNDC8Q6A555 127 aa9.83□□□□□ -0.84
SYNE2-209ENST00000553308 SLC39A4Q6P5W5 647 aa9.83□□□□□ -0.84
SYNE2-209ENST00000553308 DTHD1Q6ZMT9 781 aa9.83□□□□□ -0.84
SYNE2-209ENST00000553308 LRRTM3Q86VH5 581 aa9.83□□□□□ -0.84
SYNE2-209ENST00000553308 EZH1Q92800 747 aaPredicted RBP9.83□□□□□ -0.84
SYNE2-209ENST00000553308 LLPHQ9BRT6 129 aaKnown RBP9.83□□□□□ -0.84
SYNE2-209ENST00000553308 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.83□□□□□ -0.84
SYNE2-209ENST00000553308 VPS45Q9NRW7 570 aa9.83□□□□□ -0.84
SYNE2-209ENST00000553308 ABI2Q9NYB9 513 aaPredicted RBP9.83□□□□□ -0.84
SYNE2-209ENST00000553308 LIMCH1Q9UPQ0 1083 aa9.83□□□□□ -0.84
SYNE2-209ENST00000553308 CNOT1A5YKK6 2376 aaKnown RBP9.83□□□□□ -0.84
SYNE2-209ENST00000553308 DENND4CQ5VZ89 1909 aa9.83□□□□□ -0.84
SYNE2-209ENST00000553308 CFAP47Q6ZTR5 3102 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 KIAA1549LQ6ZVL6 1849 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 SCN1AP35498 2009 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 A0A0B4J269 797 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 ANO9A1A5B4 782 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 C4orf47A7E2U8 309 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 H0YCG3 227 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 K7ENM7 598 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 LAD1O00515 517 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 PIRO00625 290 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 CYB561D2O14569 222 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 PIGRP01833 764 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 F11P03951 625 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 PLA2G4BP0C869 781 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 HAPLN1P10915 354 aaPredicted RBP9.82□□□□□ -0.84
SYNE2-209ENST00000553308 HMGA1P17096 107 aaKnown RBP9.82□□□□□ -0.84
SYNE2-209ENST00000553308 SPINK2P20155 84 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 GPR15P49685 360 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 GALK1P51570 392 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 HMGN5P82970 282 aaKnown RBP9.82□□□□□ -0.84
SYNE2-209ENST00000553308 CREB5Q02930 508 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 TMEM132DQ14C87 1099 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 ELF2Q15723 593 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 KYAT1Q16773 422 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 ARSHQ5FYA8 562 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 SDHAF4Q5VUM1 108 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 WSCD1Q658N2 575 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 UNQ6494/PRO21346Q6UXR6 183 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 CAMKK1Q8N5S9 505 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 FAM184AQ8NB25 1140 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 RPLP0P6Q8NHW5 317 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 SPPL2BQ8TCT7 592 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 TSPAN18Q96SJ8 248 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 P2RY13Q9BPV8 354 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 PYM1Q9BRP8 204 aaKnown RBP9.82□□□□□ -0.84
SYNE2-209ENST00000553308 MSTO1Q9BUK6 570 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 KIF9Q9HAQ2 790 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 TDP1Q9NUW8 608 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 TMLHEQ9NVH6 421 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 KCND2Q9NZV8 630 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 LARSQ9P2J5 1176 aaKnown RBP9.82□□□□□ -0.84
SYNE2-209ENST00000553308 KCNG1Q9UIX4 513 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 CPSF3Q9UKF6 684 aaKnown RBP9.82□□□□□ -0.84
SYNE2-209ENST00000553308 DSEQ9UL01 958 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 ZMIZ1Q9ULJ6 1067 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 TBX20Q9UMR3 447 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 INVSQ9Y283 1065 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 MYO16Q9Y6X6 1858 aa9.82□□□□□ -0.84
SYNE2-209ENST00000553308 LNP1A1A4G5 178 aa9.81□□□□□ -0.84
SYNE2-209ENST00000553308 BCLAF3A2AJT9 711 aaKnown RBP9.81□□□□□ -0.84
SYNE2-209ENST00000553308 TISP43B9A030 160 aa9.81□□□□□ -0.84
SYNE2-209ENST00000553308 TADA3O75528 432 aa9.81□□□□□ -0.84
SYNE2-209ENST00000553308 APBB3O95704 486 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms