RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 TTC30AQ86WT1 665 aa12.87□□□□□ -0.35
SNRPF-205ENST00000553192 TMEM130Q8N3G9 435 aa12.87□□□□□ -0.35
SNRPF-205ENST00000553192 DEFB119Q8N690 84 aa12.87□□□□□ -0.35
SNRPF-205ENST00000553192 APPL2Q8NEU8 664 aa12.87□□□□□ -0.35
SNRPF-205ENST00000553192 C18orf25Q96B23 403 aaPredicted RBP12.87□□□□□ -0.35
SNRPF-205ENST00000553192 LPIN3Q9BQK8 851 aa12.87□□□□□ -0.35
SNRPF-205ENST00000553192 C22orf23Q9BZE7 217 aa12.87□□□□□ -0.35
SNRPF-205ENST00000553192 ANKEF1Q9NU02 776 aa12.87□□□□□ -0.35
SNRPF-205ENST00000553192 CIZ1Q9ULV3 898 aaPredicted RBP12.87□□□□□ -0.35
SNRPF-205ENST00000553192 PCDHB8Q9UN66 801 aa12.87□□□□□ -0.35
SNRPF-205ENST00000553192 TIMM13Q9Y5L4 95 aaPredicted RBP12.87□□□□□ -0.35
SNRPF-205ENST00000553192 RPL9P32969 192 aaKnown RBP12.86□□□□□ -0.35
SNRPF-205ENST00000553192 MCM4P33991 863 aa12.86□□□□□ -0.35
SNRPF-205ENST00000553192 NLRP5P59047 1200 aa12.86□□□□□ -0.35
SNRPF-205ENST00000553192 PDGFRLQ15198 375 aa12.86□□□□□ -0.35
SNRPF-205ENST00000553192 TMEM132AQ24JP5 1023 aa12.86□□□□□ -0.35
SNRPF-205ENST00000553192 INF2Q27J81 1249 aa12.86□□□□□ -0.35
SNRPF-205ENST00000553192 DCAF4L1Q3SXM0 396 aa12.86□□□□□ -0.35
SNRPF-205ENST00000553192 DHX32Q7L7V1 743 aaKnown RBP12.86□□□□□ -0.35
SNRPF-205ENST00000553192 ZBTB8OSQ8IWT0 167 aa12.86□□□□□ -0.35
SNRPF-205ENST00000553192 HSD17B14Q9BPX1 270 aa12.86□□□□□ -0.35
SNRPF-205ENST00000553192 PCOLCE2Q9UKZ9 415 aa12.86□□□□□ -0.35
SNRPF-205ENST00000553192 PCDHA4Q9UN74 947 aa12.86□□□□□ -0.35
SNRPF-205ENST00000553192 PTPN13Q12923 2485 aa12.86□□□□□ -0.35
SNRPF-205ENST00000553192 USO1O60763 962 aaKnown RBP12.85□□□□□ -0.35
SNRPF-205ENST00000553192 ATF6P18850 670 aa12.85□□□□□ -0.35
SNRPF-205ENST00000553192 LIG1P18858 919 aa12.85□□□□□ -0.35
SNRPF-205ENST00000553192 CDC25CP30307 473 aa12.85□□□□□ -0.35
SNRPF-205ENST00000553192 YWHAHQ04917 246 aaPredicted RBP12.85□□□□□ -0.35
SNRPF-205ENST00000553192 NT5DC1Q5TFE4 455 aa12.85□□□□□ -0.35
SNRPF-205ENST00000553192 WHAMMQ8TF30 809 aa12.85□□□□□ -0.35
SNRPF-205ENST00000553192 SPACA7Q96KW9 195 aa12.85□□□□□ -0.35
SNRPF-205ENST00000553192 RNF26Q9BY78 433 aaPredicted RBP12.85□□□□□ -0.35
SNRPF-205ENST00000553192 RWDD1Q9H446 243 aaPredicted RBP12.85□□□□□ -0.35
SNRPF-205ENST00000553192 TDP1Q9NUW8 608 aa12.85□□□□□ -0.35
SNRPF-205ENST00000553192 SLC38A7Q9NVC3 462 aa12.85□□□□□ -0.35
SNRPF-205ENST00000553192 TRIP11Q15643 1979 aa12.85□□□□□ -0.35
SNRPF-205ENST00000553192 PIEZO2Q9H5I5 2752 aa12.85□□□□□ -0.35
SNRPF-205ENST00000553192 NID2Q14112 1375 aa12.84□□□□□ -0.35
SNRPF-205ENST00000553192 CCDC196A0A1B0GTZ2 297 aa12.84□□□□□ -0.35
SNRPF-205ENST00000553192 FAM149AA5PLN7 773 aa12.84□□□□□ -0.35
SNRPF-205ENST00000553192 M0QZQ0 153 aa12.84□□□□□ -0.35
SNRPF-205ENST00000553192 SGK1O00141 431 aa12.84□□□□□ -0.35
SNRPF-205ENST00000553192 MARCH6O60337 910 aa12.84□□□□□ -0.35
SNRPF-205ENST00000553192 LARGE1O95461 756 aa12.84□□□□□ -0.35
SNRPF-205ENST00000553192 ATXN1LP0C7T5 689 aaKnown RBP12.84□□□□□ -0.35
SNRPF-205ENST00000553192 KCNE1P15382 129 aa12.84□□□□□ -0.35
SNRPF-205ENST00000553192 NMT1P30419 496 aaKnown RBP12.84□□□□□ -0.35
SNRPF-205ENST00000553192 OPRD1P41143 372 aa12.84□□□□□ -0.35
SNRPF-205ENST00000553192 GRM5P41594 1212 aa12.84□□□□□ -0.35
SNRPF-205ENST00000553192 ZNF33AQ06730 810 aa12.84□□□□□ -0.35
SNRPF-205ENST00000553192 BFSP1Q12934 665 aa12.84□□□□□ -0.35
SNRPF-205ENST00000553192 ADCK5Q3MIX3 580 aa12.84□□□□□ -0.35
SNRPF-205ENST00000553192 CC2D1AQ6P1N0 951 aaPredicted RBP12.84□□□□□ -0.35
SNRPF-205ENST00000553192 SFTPA1Q8IWL2 248 aa12.84□□□□□ -0.35
SNRPF-205ENST00000553192 CPA6Q8N4T0 437 aa12.84□□□□□ -0.35
SNRPF-205ENST00000553192 MAB21L3Q8N8X9 362 aa12.84□□□□□ -0.35
SNRPF-205ENST00000553192 PIGOQ8TEQ8 1089 aa12.84□□□□□ -0.35
SNRPF-205ENST00000553192 EXOC4Q96A65 974 aa12.84□□□□□ -0.35
SNRPF-205ENST00000553192 FCRL3Q96P31 734 aaPredicted RBP12.84□□□□□ -0.35
SNRPF-205ENST00000553192 EIF2AK1Q9BQI3 630 aaKnown RBP12.84□□□□□ -0.35
SNRPF-205ENST00000553192 C2orf40Q9H1Z8 148 aa12.84□□□□□ -0.35
SNRPF-205ENST00000553192 KIF9Q9HAQ2 790 aa12.84□□□□□ -0.35
SNRPF-205ENST00000553192 SH3GLB2Q9NR46 395 aa12.84□□□□□ -0.35
SNRPF-205ENST00000553192 NAP1L2Q9ULW6 460 aaPredicted RBP12.84□□□□□ -0.35
SNRPF-205ENST00000553192 OR6C75A6NL08 312 aa12.83□□□□□ -0.36
SNRPF-205ENST00000553192 CAPN9O14815 690 aa12.83□□□□□ -0.36
SNRPF-205ENST00000553192 TLX3O43711 291 aaPredicted RBP12.83□□□□□ -0.36
SNRPF-205ENST00000553192 ALDH1A2O94788 518 aa12.83□□□□□ -0.36
SNRPF-205ENST00000553192 F11P03951 625 aa12.83□□□□□ -0.36
SNRPF-205ENST00000553192 SYPP08247 313 aa12.83□□□□□ -0.36
SNRPF-205ENST00000553192 MARCKSP29966 332 aaPredicted RBP12.83□□□□□ -0.36
SNRPF-205ENST00000553192 AVPR1AP37288 418 aa12.83□□□□□ -0.36
SNRPF-205ENST00000553192 EIF2S3P41091 472 aaKnown RBP12.83□□□□□ -0.36
SNRPF-205ENST00000553192 CDR1P51861 262 aa12.83□□□□□ -0.36
SNRPF-205ENST00000553192 OSTNP61366 133 aa12.83□□□□□ -0.36
SNRPF-205ENST00000553192 KCNC4Q03721 635 aa12.83□□□□□ -0.36
SNRPF-205ENST00000553192 MTF1Q14872 753 aa12.83□□□□□ -0.36
SNRPF-205ENST00000553192 GAB4Q2WGN9 574 aa12.83□□□□□ -0.36
SNRPF-205ENST00000553192 EML3Q32P44 896 aa12.83□□□□□ -0.36
SNRPF-205ENST00000553192 ATF7IP2Q5U623 682 aa12.83□□□□□ -0.36
SNRPF-205ENST00000553192 LMBRD2Q68DH5 695 aaPredicted RBP12.83□□□□□ -0.36
SNRPF-205ENST00000553192 TXNDC8Q6A555 127 aa12.83□□□□□ -0.36
SNRPF-205ENST00000553192 PPP4R3AQ6IN85 833 aa12.83□□□□□ -0.36
SNRPF-205ENST00000553192 ITIH5Q86UX2 942 aa12.83□□□□□ -0.36
SNRPF-205ENST00000553192 SLC41A1Q8IVJ1 513 aa12.83□□□□□ -0.36
SNRPF-205ENST00000553192 BLIDQ8IZY5 108 aa12.83□□□□□ -0.36
SNRPF-205ENST00000553192 BAHD1Q8TBE0 780 aaPredicted RBP12.83□□□□□ -0.36
SNRPF-205ENST00000553192 KIFC3Q9BVG8 833 aa12.83□□□□□ -0.36
SNRPF-205ENST00000553192 SLC26A6Q9BXS9 759 aa12.83□□□□□ -0.36
SNRPF-205ENST00000553192 CDT1Q9H211 546 aa12.83□□□□□ -0.36
SNRPF-205ENST00000553192 CNTN3Q9P232 1028 aa12.83□□□□□ -0.36
SNRPF-205ENST00000553192 WNT6Q9Y6F9 365 aa12.83□□□□□ -0.36
SNRPF-205ENST00000553192 GOLGA4Q13439 2230 aaKnown RBP12.82□□□□□ -0.36
SNRPF-205ENST00000553192 MGAQ8IWI9 3026 aa12.82□□□□□ -0.36
SNRPF-205ENST00000553192 AP5Z1O43299 807 aa12.82□□□□□ -0.36
SNRPF-205ENST00000553192 AKAP17AQ02040 695 aaKnown RBP12.82□□□□□ -0.36
SNRPF-205ENST00000553192 RPL6Q02878 288 aaKnown RBP12.82□□□□□ -0.36
SNRPF-205ENST00000553192 MESP2Q0VG99 397 aa12.82□□□□□ -0.36
SNRPF-205ENST00000553192 ZNF268Q14587 947 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms