RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 TTC27Q6P3X3 843 aa9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 SESTD1Q86VW0 696 aa9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 RHOT1Q8IXI2 618 aa9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 SNX27Q96L92 541 aa9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 IP6K2Q9UHH9 426 aa9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 GABRQQ9UN88 632 aa9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 TLL2Q9Y6L7 1015 aa9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 PIK3R2O00459 728 aa9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 TCF4P15884 667 aa9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 ADAM17P78536 824 aa9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 CXCL17Q6UXB2 119 aa9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 NT5DC4Q86YG4 428 aa9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 CD302Q8IX05 232 aa9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 ATG4AQ8WYN0 398 aa9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 TRIB2Q92519 343 aa9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 RNF25Q96BH1 459 aaPredicted RBP9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 DDX27Q96GQ7 796 aaKnown RBP9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 ZIM3Q96PE6 472 aa9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 FAM114A2Q9NRY5 505 aa9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 CYTH4Q9UIA0 394 aa9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 STRIP2Q9ULQ0 834 aa9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 SNX24Q9Y343 169 aa9.62□□□□□ -0.87
RAB3IP-218ENST00000553099 F8VP50 259 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 PI4K2BG5E9Z4 385 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 PSTPIP1O43586 416 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 MICAL2O94851 1124 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 RALAP11233 206 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 GNAT1P11488 350 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 ATF7P17544 494 aaPredicted RBP9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 FLT3P36888 993 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 FCGRTP55899 365 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 PSMC1P62191 440 aaKnown RBP9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 ATP13A4Q4VNC1 1196 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 TWF2Q6IBS0 349 aaKnown RBP9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 CYP4F22Q6NT55 531 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 ZNF771Q7L3S4 317 aaPredicted RBP9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 C3orf20Q8ND61 904 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 TRPV1Q8NER1 839 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 BEST2Q8NFU1 509 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 UBA3Q8TBC4 463 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 UBE2Q2Q8WVN8 375 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 UBLCP1Q8WVY7 318 aaPredicted RBP9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 ACSF2Q96CM8 615 aaPredicted RBP9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 CPXM1Q96SM3 734 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 FAM118BQ9BPY3 351 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 ERP44Q9BS26 406 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 FAM204AQ9H8W3 233 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 VRTNQ9H8Y1 702 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 CYP3A43Q9HB55 503 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 ADAM21Q9UKJ8 722 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 BARX2Q9UMQ3 279 aaPredicted RBP9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 Q9Y3F1 56 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 PASKQ96RG2 1323 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 TMEM191CA6NGB0 347 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 CA12O43570 354 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 KRT14P02533 472 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 CTSHP09668 335 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 KRT3P12035 628 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 CDH5P33151 784 aaPredicted RBP9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 COILP38432 576 aaPredicted RBP9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 FLT3LGP49771 235 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 PLTPP55058 493 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 OGDHQ02218 1023 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 ZNF252P-AS1Q0IIN9 211 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 PPP1R7Q15435 360 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 KAZNQ674X7 775 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 EMC1Q8N766 993 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 C12orf29Q8N999 325 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 CCDC114Q96M63 670 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 HERPUD2Q9BSE4 406 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 PLEKHA5Q9HAU0 1116 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 METTL5Q9NRN9 209 aaKnown RBP9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 FAM49BQ9NUQ9 324 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 HTTP42858 3142 aa9.61□□□□□ -0.87
RAB3IP-218ENST00000553099 FAM187AA6NFU0 413 aa9.6□□□□□ -0.87
RAB3IP-218ENST00000553099 M0QZ92 97 aa9.6□□□□□ -0.87
RAB3IP-218ENST00000553099 DUSP11O75319 330 aaKnown RBP9.6□□□□□ -0.87
RAB3IP-218ENST00000553099 KRT1P04264 644 aa9.6□□□□□ -0.87
RAB3IP-218ENST00000553099 IBSPP21815 317 aaPredicted RBP9.6□□□□□ -0.87
RAB3IP-218ENST00000553099 PSMA2P25787 234 aa9.6□□□□□ -0.87
RAB3IP-218ENST00000553099 TRIM32Q13049 653 aa9.6□□□□□ -0.87
RAB3IP-218ENST00000553099 SIX1Q15475 284 aaPredicted RBP9.6□□□□□ -0.87
RAB3IP-218ENST00000553099 MFSD14CQ5VZR4 134 aa9.6□□□□□ -0.87
RAB3IP-218ENST00000553099 FMO2Q99518 471 aa9.6□□□□□ -0.87
RAB3IP-218ENST00000553099 NT5C1AQ9BXI3 368 aa9.6□□□□□ -0.87
RAB3IP-218ENST00000553099 LHX5Q9H2C1 402 aa9.6□□□□□ -0.87
RAB3IP-218ENST00000553099 RNF39Q9H2S5 420 aa9.6□□□□□ -0.87
RAB3IP-218ENST00000553099 GOLGA2P5Q9HBQ8 144 aa9.6□□□□□ -0.87
RAB3IP-218ENST00000553099 CHST7Q9NS84 486 aa9.6□□□□□ -0.87
RAB3IP-218ENST00000553099 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.6□□□□□ -0.87
RAB3IP-218ENST00000553099 PCYOX1Q9UHG3 505 aa9.6□□□□□ -0.87
RAB3IP-218ENST00000553099 TSPAN16Q9UKR8 245 aa9.6□□□□□ -0.87
RAB3IP-218ENST00000553099 SCN10AQ9Y5Y9 1956 aa9.6□□□□□ -0.87
RAB3IP-218ENST00000553099 FSCN2O14926 492 aa9.6□□□□□ -0.87
RAB3IP-218ENST00000553099 ECEL1O95672 775 aa9.6□□□□□ -0.87
RAB3IP-218ENST00000553099 ERBB2P04626 1255 aa9.6□□□□□ -0.87
RAB3IP-218ENST00000553099 VDRP11473 427 aa9.6□□□□□ -0.87
RAB3IP-218ENST00000553099 AXLP30530 894 aa9.6□□□□□ -0.87
RAB3IP-218ENST00000553099 HOXD11P31277 338 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms