RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 EPHA5P54756 1037 aa9.4□□□□□ -0.9
TMEM116-217ENST00000552801 NCKAP1LP55160 1127 aa9.4□□□□□ -0.9
TMEM116-217ENST00000552801 MLLT6P55198 1093 aaPredicted RBP9.4□□□□□ -0.9
TMEM116-217ENST00000552801 TSPY1Q01534 308 aa9.4□□□□□ -0.9
TMEM116-217ENST00000552801 SPEM2Q0P670 501 aa9.4□□□□□ -0.9
TMEM116-217ENST00000552801 BFSP1Q12934 665 aa9.4□□□□□ -0.9
TMEM116-217ENST00000552801 IL17AQ16552 155 aa9.4□□□□□ -0.9
TMEM116-217ENST00000552801 SLC39A12Q504Y0 691 aa9.4□□□□□ -0.9
TMEM116-217ENST00000552801 HYIQ5T013 277 aa9.4□□□□□ -0.9
TMEM116-217ENST00000552801 JADE1Q6IE81 842 aa9.4□□□□□ -0.9
TMEM116-217ENST00000552801 DNAJB7Q7Z6W7 309 aaPredicted RBP9.4□□□□□ -0.9
TMEM116-217ENST00000552801 RALGPS2Q86X27 583 aaPredicted RBP9.4□□□□□ -0.9
TMEM116-217ENST00000552801 MAP4K3Q8IVH8 894 aa9.4□□□□□ -0.9
TMEM116-217ENST00000552801 ARID3BQ8IVW6 561 aaPredicted RBP9.4□□□□□ -0.9
TMEM116-217ENST00000552801 DCP1BQ8IZD4 617 aaKnown RBP9.4□□□□□ -0.9
TMEM116-217ENST00000552801 SPEM1Q8N4L4 309 aa9.4□□□□□ -0.9
TMEM116-217ENST00000552801 TTC8Q8TAM2 541 aa9.4□□□□□ -0.9
TMEM116-217ENST00000552801 NOC3LQ8WTT2 800 aaKnown RBP9.4□□□□□ -0.9
TMEM116-217ENST00000552801 PSMG2Q969U7 264 aa9.4□□□□□ -0.9
TMEM116-217ENST00000552801 SENP8Q96LD8 212 aa9.4□□□□□ -0.9
TMEM116-217ENST00000552801 ZNF560Q96MR9 790 aa9.4□□□□□ -0.9
TMEM116-217ENST00000552801 PNMA5Q96PV4 448 aa9.4□□□□□ -0.9
TMEM116-217ENST00000552801 REEP2Q9BRK0 252 aa9.4□□□□□ -0.9
TMEM116-217ENST00000552801 PYM1Q9BRP8 204 aaKnown RBP9.4□□□□□ -0.9
TMEM116-217ENST00000552801 MMTAG2Q9BU76 263 aaKnown RBP9.4□□□□□ -0.9
TMEM116-217ENST00000552801 TRPV4Q9HBA0 871 aa9.4□□□□□ -0.9
TMEM116-217ENST00000552801 CCDC39Q9UFE4 941 aa9.4□□□□□ -0.9
TMEM116-217ENST00000552801 ZMYM5Q9UJ78 669 aa9.4□□□□□ -0.9
TMEM116-217ENST00000552801 DERAQ9Y315 318 aa9.4□□□□□ -0.9
TMEM116-217ENST00000552801 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.4□□□□□ -0.9
TMEM116-217ENST00000552801 EP300Q09472 2414 aaPredicted RBP9.4□□□□□ -0.9
TMEM116-217ENST00000552801 VPS13AQ96RL7 3174 aa9.4□□□□□ -0.9
TMEM116-217ENST00000552801 ZNF638Q14966 1978 aaKnown RBP9.4□□□□□ -0.9
TMEM116-217ENST00000552801 MTMR11A4FU01 709 aa9.39□□□□□ -0.91
TMEM116-217ENST00000552801 CHURC1-FNTBB4DL54 471 aa9.39□□□□□ -0.91
TMEM116-217ENST00000552801 SPECC1L-ADORA2AF8WAN1 911 aa9.39□□□□□ -0.91
TMEM116-217ENST00000552801 K7ELQ4 463 aaPredicted RBP9.39□□□□□ -0.91
TMEM116-217ENST00000552801 CYB561D2O14569 222 aa9.39□□□□□ -0.91
TMEM116-217ENST00000552801 ABLIM1O14639 778 aa9.39□□□□□ -0.91
TMEM116-217ENST00000552801 LILRB5O75023 590 aa9.39□□□□□ -0.91
TMEM116-217ENST00000552801 ATG13O75143 517 aa9.39□□□□□ -0.91
TMEM116-217ENST00000552801 RETP07949 1114 aa9.39□□□□□ -0.91
TMEM116-217ENST00000552801 FNTBP49356 437 aa9.39□□□□□ -0.91
TMEM116-217ENST00000552801 MCM2P49736 904 aa9.39□□□□□ -0.91
TMEM116-217ENST00000552801 TAF6P49848 677 aa9.39□□□□□ -0.91
TMEM116-217ENST00000552801 LILRA4P59901 499 aa9.39□□□□□ -0.91
TMEM116-217ENST00000552801 SATB1Q01826 763 aa9.39□□□□□ -0.91
TMEM116-217ENST00000552801 SMARCB1Q12824 385 aa9.39□□□□□ -0.91
TMEM116-217ENST00000552801 GRSF1Q12849 480 aaKnown RBP eCLIP9.39□□□□□ -0.91
TMEM116-217ENST00000552801 ENOX2Q16206 610 aaKnown RBP9.39□□□□□ -0.91
TMEM116-217ENST00000552801 SV2CQ496J9 727 aa9.39□□□□□ -0.91
TMEM116-217ENST00000552801 SPATA1Q5VX52 437 aa9.39□□□□□ -0.91
TMEM116-217ENST00000552801 C9orf57Q5W0N0 161 aa9.39□□□□□ -0.91
TMEM116-217ENST00000552801 LARP1BQ659C4 914 aaKnown RBP9.39□□□□□ -0.91
TMEM116-217ENST00000552801 IL31Q6EBC2 164 aa9.39□□□□□ -0.91
TMEM116-217ENST00000552801 CENPPQ6IPU0 288 aa9.39□□□□□ -0.91
TMEM116-217ENST00000552801 LONP2Q86WA8 852 aa9.39□□□□□ -0.91
TMEM116-217ENST00000552801 C12orf50Q8NA57 414 aaPredicted RBP9.39□□□□□ -0.91
TMEM116-217ENST00000552801 ATAD1Q8NBU5 361 aa9.39□□□□□ -0.91
TMEM116-217ENST00000552801 TTC16Q8NEE8 873 aa9.39□□□□□ -0.91
TMEM116-217ENST00000552801 NETO1Q8TDF5 533 aa9.39□□□□□ -0.91
TMEM116-217ENST00000552801 BPIFB1Q8TDL5 484 aa9.39□□□□□ -0.91
TMEM116-217ENST00000552801 C2orf15Q8WU43 125 aaKnown RBP9.39□□□□□ -0.91
TMEM116-217ENST00000552801 POMGNT1Q8WZA1 660 aa9.39□□□□□ -0.91
TMEM116-217ENST00000552801 CHAMP1Q96JM3 812 aa9.39□□□□□ -0.91
TMEM116-217ENST00000552801 PRR14Q9BWN1 585 aa9.39□□□□□ -0.91
TMEM116-217ENST00000552801 TASP1Q9H6P5 420 aa9.39□□□□□ -0.91
TMEM116-217ENST00000552801 ABI2Q9NYB9 513 aaPredicted RBP9.39□□□□□ -0.91
TMEM116-217ENST00000552801 HSFX1Q9UBD0 423 aa9.39□□□□□ -0.91
TMEM116-217ENST00000552801 EXOC7Q9UPT5 735 aa9.39□□□□□ -0.91
TMEM116-217ENST00000552801 MYO15AQ9UKN7 3530 aa9.39□□□□□ -0.91
TMEM116-217ENST00000552801 GVINP1Q7Z2Y8 2422 aa9.39□□□□□ -0.91
TMEM116-217ENST00000552801 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.38□□□□□ -0.91
TMEM116-217ENST00000552801 DCDC2BA2VCK2 349 aa9.38□□□□□ -0.91
TMEM116-217ENST00000552801 LRP3O75074 770 aa9.38□□□□□ -0.91
TMEM116-217ENST00000552801 CCDC192P0DO97 292 aa9.38□□□□□ -0.91
TMEM116-217ENST00000552801 CHRNB1P11230 501 aa9.38□□□□□ -0.91
TMEM116-217ENST00000552801 CTHP32929 405 aa9.38□□□□□ -0.91
TMEM116-217ENST00000552801 LONP1P36776 959 aaKnown RBP9.38□□□□□ -0.91
TMEM116-217ENST00000552801 SOX9P48436 509 aa9.38□□□□□ -0.91
TMEM116-217ENST00000552801 ACOT2P49753 483 aa9.38□□□□□ -0.91
TMEM116-217ENST00000552801 ATXN1P54253 815 aaKnown RBP9.38□□□□□ -0.91
TMEM116-217ENST00000552801 FCHO2Q0JRZ9 810 aa9.38□□□□□ -0.91
TMEM116-217ENST00000552801 POSTNQ15063 836 aa9.38□□□□□ -0.91
TMEM116-217ENST00000552801 PON2Q15165 354 aa9.38□□□□□ -0.91
TMEM116-217ENST00000552801 ITPRIPL2Q3MIP1 535 aa9.38□□□□□ -0.91
TMEM116-217ENST00000552801 AASDHQ4L235 1098 aaPredicted RBP9.38□□□□□ -0.91
TMEM116-217ENST00000552801 TMEM119Q4V9L6 283 aa9.38□□□□□ -0.91
TMEM116-217ENST00000552801 SYCP3Q8IZU3 236 aa9.38□□□□□ -0.91
TMEM116-217ENST00000552801 SYNPOQ8N3V7 929 aa9.38□□□□□ -0.91
TMEM116-217ENST00000552801 SPPL2BQ8TCT7 592 aa9.38□□□□□ -0.91
TMEM116-217ENST00000552801 GIPC2Q8TF65 315 aa9.38□□□□□ -0.91
TMEM116-217ENST00000552801 DDX1Q92499 740 aaKnown RBP9.38□□□□□ -0.91
TMEM116-217ENST00000552801 LARP4BQ92615 738 aaKnown RBP9.38□□□□□ -0.91
TMEM116-217ENST00000552801 MRPS31Q92665 395 aaKnown RBP9.38□□□□□ -0.91
TMEM116-217ENST00000552801 ZFYVE19Q96K21 471 aa9.38□□□□□ -0.91
TMEM116-217ENST00000552801 ASB7Q9H672 318 aa9.38□□□□□ -0.91
TMEM116-217ENST00000552801 DPP3Q9NY33 737 aa9.38□□□□□ -0.91
TMEM116-217ENST00000552801 OBP2AQ9NY56 170 aa9.38□□□□□ -0.91
TMEM116-217ENST00000552801 PLA2G2EQ9NZK7 142 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms