RNA–Protein interactions for RNA: ENST00000552606.1

CCDC59-207, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-207ENST00000552606 HSP90AA4PQ58FG1 418 aa9.78□□□□□ -0.84
CCDC59-207ENST00000552606 TCP11X2Q5H9J9 407 aa9.78□□□□□ -0.84
CCDC59-207ENST00000552606 ZNF667Q5HYK9 610 aa9.78□□□□□ -0.84
CCDC59-207ENST00000552606 SCARA5Q6ZMJ2 495 aa9.78□□□□□ -0.84
CCDC59-207ENST00000552606 DPH6Q7L8W6 267 aa9.78□□□□□ -0.84
CCDC59-207ENST00000552606 APTXQ7Z2E3 356 aaKnown RBP9.78□□□□□ -0.84
CCDC59-207ENST00000552606 PPFIBP1Q86W92 1011 aa9.78□□□□□ -0.84
CCDC59-207ENST00000552606 GLYCTKQ8IVS8 523 aa9.78□□□□□ -0.84
CCDC59-207ENST00000552606 FEZF2Q8TBJ5 459 aa9.78□□□□□ -0.84
CCDC59-207ENST00000552606 MSLNLQ96KJ4 702 aa9.78□□□□□ -0.84
CCDC59-207ENST00000552606 MRPL45Q9BRJ2 306 aaKnown RBP9.78□□□□□ -0.84
CCDC59-207ENST00000552606 OXCT2Q9BYC2 517 aaPredicted RBP9.78□□□□□ -0.84
CCDC59-207ENST00000552606 NIF3L1Q9GZT8 377 aa9.78□□□□□ -0.84
CCDC59-207ENST00000552606 NAT10Q9H0A0 1025 aaKnown RBP9.78□□□□□ -0.84
CCDC59-207ENST00000552606 ZCWPW1Q9H0M4 648 aa9.78□□□□□ -0.84
CCDC59-207ENST00000552606 UBE2ZQ9H832 354 aaPredicted RBP9.78□□□□□ -0.84
CCDC59-207ENST00000552606 PRDM6Q9NQX0 595 aa9.78□□□□□ -0.84
CCDC59-207ENST00000552606 MAN1C1Q9NR34 630 aa9.78□□□□□ -0.84
CCDC59-207ENST00000552606 FANCLQ9NW38 375 aa9.78□□□□□ -0.84
CCDC59-207ENST00000552606 RAB20Q9NX57 234 aa9.78□□□□□ -0.84
CCDC59-207ENST00000552606 BARX2Q9UMQ3 279 aaPredicted RBP9.78□□□□□ -0.84
CCDC59-207ENST00000552606 UNC80Q8N2C7 3258 aa9.77□□□□□ -0.85
CCDC59-207ENST00000552606 NCK2O43639 380 aa9.77□□□□□ -0.85
CCDC59-207ENST00000552606 HUS1O60921 280 aa9.77□□□□□ -0.85
CCDC59-207ENST00000552606 FAM163BP0C2L3 166 aa9.77□□□□□ -0.85
CCDC59-207ENST00000552606 OR4Q2P0C623 313 aa9.77□□□□□ -0.85
CCDC59-207ENST00000552606 CHRM1P11229 460 aaPredicted RBP9.77□□□□□ -0.85
CCDC59-207ENST00000552606 KLRC2P26717 231 aa9.77□□□□□ -0.85
CCDC59-207ENST00000552606 MTIF2P46199 727 aaKnown RBP9.77□□□□□ -0.85
CCDC59-207ENST00000552606 RAP1GAPP47736 663 aa9.77□□□□□ -0.85
CCDC59-207ENST00000552606 ZNF165P49910 485 aa9.77□□□□□ -0.85
CCDC59-207ENST00000552606 ZNF445P59923 1031 aa9.77□□□□□ -0.85
CCDC59-207ENST00000552606 INCA1Q0VD86 236 aa9.77□□□□□ -0.85
CCDC59-207ENST00000552606 PDAP1Q13442 181 aaKnown RBP9.77□□□□□ -0.85
CCDC59-207ENST00000552606 KRT31Q15323 416 aa9.77□□□□□ -0.85
CCDC59-207ENST00000552606 INTS6LQ5JSJ4 861 aaKnown RBP9.77□□□□□ -0.85
CCDC59-207ENST00000552606 LLGL2Q6P1M3 1020 aa9.77□□□□□ -0.85
CCDC59-207ENST00000552606 SYCE2Q6PIF2 218 aa9.77□□□□□ -0.85
CCDC59-207ENST00000552606 UBR7Q8N806 425 aa9.77□□□□□ -0.85
CCDC59-207ENST00000552606 PPM1EQ8WY54 764 aa9.77□□□□□ -0.85
CCDC59-207ENST00000552606 CASP10Q92851 521 aa9.77□□□□□ -0.85
CCDC59-207ENST00000552606 FAXDC2Q96IV6 333 aa9.77□□□□□ -0.85
CCDC59-207ENST00000552606 ARID3AQ99856 593 aa9.77□□□□□ -0.85
CCDC59-207ENST00000552606 TUBGCP2Q9BSJ2 902 aa9.77□□□□□ -0.85
CCDC59-207ENST00000552606 IMPG2Q9BZV3 1241 aa9.77□□□□□ -0.85
CCDC59-207ENST00000552606 IGFLR1Q9H665 355 aa9.77□□□□□ -0.85
CCDC59-207ENST00000552606 CBX8Q9HC52 389 aa9.77□□□□□ -0.85
CCDC59-207ENST00000552606 DZANK1Q9NVP4 752 aa9.77□□□□□ -0.85
CCDC59-207ENST00000552606 DDX43Q9NXZ2 648 aaKnown RBP9.77□□□□□ -0.85
CCDC59-207ENST00000552606 CLDND1Q9NY35 253 aa9.77□□□□□ -0.85
CCDC59-207ENST00000552606 NXF1Q9UBU9 619 aaKnown RBP9.77□□□□□ -0.85
CCDC59-207ENST00000552606 HMGXB4Q9UGU5 601 aa9.77□□□□□ -0.85
CCDC59-207ENST00000552606 R3HCC1Q9Y3T6 440 aaKnown RBP9.77□□□□□ -0.85
CCDC59-207ENST00000552606 GTPBP10A4D1E9 387 aaKnown RBP9.76□□□□□ -0.85
CCDC59-207ENST00000552606 MTMR11A4FU01 709 aa9.76□□□□□ -0.85
CCDC59-207ENST00000552606 SLC34A2O95436 690 aa9.76□□□□□ -0.85
CCDC59-207ENST00000552606 ATP1A3P13637 1013 aa9.76□□□□□ -0.85
CCDC59-207ENST00000552606 CPB1P15086 417 aa9.76□□□□□ -0.85
CCDC59-207ENST00000552606 ATF2P15336 505 aa9.76□□□□□ -0.85
CCDC59-207ENST00000552606 ACAT1P24752 427 aaKnown RBP9.76□□□□□ -0.85
CCDC59-207ENST00000552606 LMO2P25791 158 aa9.76□□□□□ -0.85
CCDC59-207ENST00000552606 LHX1P48742 406 aa9.76□□□□□ -0.85
CCDC59-207ENST00000552606 CDH8P55286 799 aa9.76□□□□□ -0.85
CCDC59-207ENST00000552606 GPR17Q13304 367 aa9.76□□□□□ -0.85
CCDC59-207ENST00000552606 TPGS2Q68CL5 300 aa9.76□□□□□ -0.85
CCDC59-207ENST00000552606 DPY19L2P1Q6NXN4 242 aa9.76□□□□□ -0.85
CCDC59-207ENST00000552606 ANKRD54Q6NXT1 300 aa9.76□□□□□ -0.85
CCDC59-207ENST00000552606 LRSAM1Q6UWE0 723 aa9.76□□□□□ -0.85
CCDC59-207ENST00000552606 RNF19BQ6ZMZ0 732 aa9.76□□□□□ -0.85
CCDC59-207ENST00000552606 LRRTM3Q86VH5 581 aa9.76□□□□□ -0.85
CCDC59-207ENST00000552606 METTL23Q86XA0 190 aa9.76□□□□□ -0.85
CCDC59-207ENST00000552606 PALB2Q86YC2 1186 aa9.76□□□□□ -0.85
CCDC59-207ENST00000552606 SMRP1Q8NCR6 262 aa9.76□□□□□ -0.85
CCDC59-207ENST00000552606 ZNF461Q8TAF7 563 aa9.76□□□□□ -0.85
CCDC59-207ENST00000552606 HDAC7Q8WUI4 952 aa9.76□□□□□ -0.85
CCDC59-207ENST00000552606 TATDN2Q93075 761 aa9.76□□□□□ -0.85
CCDC59-207ENST00000552606 SYT15Q9BQS2 421 aa9.76□□□□□ -0.85
CCDC59-207ENST00000552606 ACBD6Q9BR61 282 aa9.76□□□□□ -0.85
CCDC59-207ENST00000552606 CRISPLD1Q9H336 500 aa9.76□□□□□ -0.85
CCDC59-207ENST00000552606 NDST4Q9H3R1 872 aa9.76□□□□□ -0.85
CCDC59-207ENST00000552606 DPEP3Q9H4B8 488 aa9.76□□□□□ -0.85
CCDC59-207ENST00000552606 SFXN1Q9H9B4 322 aa9.76□□□□□ -0.85
CCDC59-207ENST00000552606 SIX2Q9NPC8 291 aa9.76□□□□□ -0.85
CCDC59-207ENST00000552606 CRTAC1Q9NQ79 661 aa9.76□□□□□ -0.85
CCDC59-207ENST00000552606 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.76□□□□□ -0.85
CCDC59-207ENST00000552606 TMLHEQ9NVH6 421 aa9.76□□□□□ -0.85
CCDC59-207ENST00000552606 TAB2Q9NYJ8 693 aa9.76□□□□□ -0.85
CCDC59-207ENST00000552606 GCNT4Q9P109 453 aa9.76□□□□□ -0.85
CCDC59-207ENST00000552606 MAGEC2Q9UBF1 373 aaPredicted RBP9.76□□□□□ -0.85
CCDC59-207ENST00000552606 LIMA1Q9UHB6 759 aaKnown RBP9.76□□□□□ -0.85
CCDC59-207ENST00000552606 AFF4Q9UHB7 1163 aaKnown RBP9.76□□□□□ -0.85
CCDC59-207ENST00000552606 CILPO75339 1184 aa9.75□□□□□ -0.85
CCDC59-207ENST00000552606 SEC24AO95486 1093 aa9.75□□□□□ -0.85
CCDC59-207ENST00000552606 C8AP07357 584 aa9.75□□□□□ -0.85
CCDC59-207ENST00000552606 POU2F2P09086 479 aa9.75□□□□□ -0.85
CCDC59-207ENST00000552606 SRGAP2BP0DMP2 458 aa9.75□□□□□ -0.85
CCDC59-207ENST00000552606 P4HA1P13674 534 aa9.75□□□□□ -0.85
CCDC59-207ENST00000552606 PCSK1P29120 753 aa9.75□□□□□ -0.85
CCDC59-207ENST00000552606 HOXA9P31269 272 aa9.75□□□□□ -0.85
CCDC59-207ENST00000552606 PSMC1P62191 440 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms