RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 CFAP57Q96MR6 1250 aa11.34□□□□□ -0.59
TGFBR1-209ENST00000552516 TGS1Q96RS0 853 aaKnown RBP11.34□□□□□ -0.59
TGFBR1-209ENST00000552516 SSX2IPQ9Y2D8 614 aa11.34□□□□□ -0.59
TGFBR1-209ENST00000552516 SNX16P57768 344 aa11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 RBP5P82980 135 aa11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 REPS2Q8NFH8 660 aa11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 STMN2Q93045 179 aa11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 R3HDMLQ9H3Y0 253 aa11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 XPO7Q9UIA9 1087 aaKnown RBP11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 UBIAD1Q9Y5Z9 338 aa11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 KIAA0100Q14667 2235 aaKnown RBP11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 RPL21P46778 160 aaKnown RBP11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 IL9RQ01113 521 aa11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 OTUD4Q01804 1114 aaKnown RBP11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 CCDC62Q6P9F0 684 aa11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 DAW1Q8N136 415 aa11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 SLC25A41Q8N5S1 370 aa11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 CFAP61Q8NHU2 1237 aa11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 PPP4R1Q8TF05 950 aa11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 RBM41Q96IZ5 413 aaKnown RBP11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 RUNDC3BQ96NL0 473 aa11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 PFDN4Q9NQP4 134 aa11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.33□□□□□ -0.63e-7■■□□□ 13.6
TGFBR1-209ENST00000552516 AIPL1Q9NZN9 384 aa11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 O00370 1275 aa11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 CLDN5O00501 218 aa11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 F7P08709 466 aaPredicted RBP11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 HIF1AQ16665 826 aa11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 HGSNATQ68CP4 663 aa11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 DENND1BQ6P3S1 775 aa11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 CCNYL1Q8N7R7 359 aa11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 CCT8L2Q96SF2 557 aa11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 CYP4F11Q9HBI6 524 aa11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 TXNRD2Q9NNW7 524 aa11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 ACSS2Q9NR19 701 aa11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 RASSF10A6NK89 507 aa11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 XPOTO43592 962 aaKnown RBP11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 NAMPTP43490 491 aa11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 BMPR2Q13873 1038 aa11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 GRIK4Q16099 956 aa11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 ATL2Q8NHH9 583 aa11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 NSMCE1Q8WV22 266 aa11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 PPM1EQ8WY54 764 aa11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 SCN11AQ9UI33 1791 aa11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 SLIT2O94813 1529 aa11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 TTLL13PA6NNM8 815 aa11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 KCNK1O00180 336 aa11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 CETPP11597 493 aa11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 CLK2P49760 499 aaKnown RBP11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 C6orf163Q5TEZ5 329 aa11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 OR6P1Q8NGX9 317 aa11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 C18orf25Q96B23 403 aaPredicted RBP11.33□□□□□ -0.6
TGFBR1-209ENST00000552516 TMEM120BA0PK00 339 aa11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 ATP8B1O43520 1251 aa11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 PTGER2P43116 358 aa11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 MAPK7Q13164 816 aa11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 MPZL3Q6UWV2 235 aa11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 DNPEPQ9ULA0 475 aa11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 GMNCA6NCL1 334 aa11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 HMGB1P1B2RPK0 211 aaPredicted RBP11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 LGALS2P05162 132 aa11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 TROVE2P10155 538 aaKnown RBP eCLIP11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 SSTR1P30872 391 aa11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 LSP1P33241 339 aa11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 ACTL9Q8TC94 416 aa11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 RXFP2Q8WXD0 754 aa11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 CCDC124Q96CT7 223 aaKnown RBP11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 TJP2Q9UDY2 1190 aa11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 LCMT1Q9UIC8 334 aa11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 COG5Q9UP83 839 aa11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 MYH14Q7Z406 1995 aaKnown RBP11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 KLRG2A4D1S0 409 aaPredicted RBP11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 M0QYT0 321 aa11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 HCRTO43612 131 aa11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 PPP2R5EQ16537 467 aa11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 ZFP42Q96MM3 310 aa11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 C12orf65Q9H3J6 166 aaKnown RBP11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 KCND2Q9NZV8 630 aa11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 TSPAN16Q9UKR8 245 aa11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 CFAP69A5D8W1 941 aa11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 NEMP1O14524 444 aa11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 ELNP15502 786 aa11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 TPH1P17752 444 aa11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 RFC1P35251 1148 aaPredicted RBP11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 ARL4CP56559 192 aa11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 LGSNQ5TDP6 509 aa11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 DENND5BQ6ZUT9 1274 aa11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 GAD1Q99259 594 aa11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 GPBP1L1Q9HC44 474 aaPredicted RBP11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 NPHS2Q9NP85 383 aa11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 IL1RAPL1Q9NZN1 696 aa11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 GTF3C4Q9UKN8 822 aa11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 CEP290O15078 2479 aa11.32□□□□□ -0.6
TGFBR1-209ENST00000552516 NFIL3Q16649 462 aa11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 FAM172AQ8WUF8 416 aa11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 USP6NLQ92738 828 aa11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 PARK7Q99497 189 aaKnown RBP11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 PCMTD2Q9NV79 361 aa11.31□□□□□ -0.6
TGFBR1-209ENST00000552516 E5RJQ4 531 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms