RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 FAM228BP0C875 321 aa11.06□□□□□ -0.64
NEK3-203ENST00000551355 SLC8A3P57103 927 aa11.06□□□□□ -0.64
NEK3-203ENST00000551355 SNX16P57768 344 aa11.06□□□□□ -0.64
NEK3-203ENST00000551355 YWHAHQ04917 246 aaPredicted RBP11.06□□□□□ -0.64
NEK3-203ENST00000551355 SMARCB1Q12824 385 aa11.06□□□□□ -0.64
NEK3-203ENST00000551355 ZNF394Q53GI3 561 aa11.06□□□□□ -0.64
NEK3-203ENST00000551355 ARHGAP17Q68EM7 881 aa11.06□□□□□ -0.64
NEK3-203ENST00000551355 OVOS1Q6IE37 1185 aa11.06□□□□□ -0.64
NEK3-203ENST00000551355 KCNT2Q6UVM3 1135 aa11.06□□□□□ -0.64
NEK3-203ENST00000551355 LCLAT1Q6UWP7 414 aa11.06□□□□□ -0.64
NEK3-203ENST00000551355 GLYCTKQ8IVS8 523 aa11.06□□□□□ -0.64
NEK3-203ENST00000551355 GPR65Q8IYL9 337 aa11.06□□□□□ -0.64
NEK3-203ENST00000551355 TMEM130Q8N3G9 435 aa11.06□□□□□ -0.64
NEK3-203ENST00000551355 TMEM35BQ8NCS4 154 aa11.06□□□□□ -0.64
NEK3-203ENST00000551355 MSANTD4Q8NCY6 345 aa11.06□□□□□ -0.64
NEK3-203ENST00000551355 SP7Q8TDD2 431 aaPredicted RBP11.06□□□□□ -0.64
NEK3-203ENST00000551355 TRIM11Q96F44 468 aa11.06□□□□□ -0.64
NEK3-203ENST00000551355 IGSF21Q96ID5 467 aa11.06□□□□□ -0.64
NEK3-203ENST00000551355 CALR3Q96L12 384 aaKnown RBP11.06□□□□□ -0.64
NEK3-203ENST00000551355 NOX5Q96PH1 765 aa11.06□□□□□ -0.64
NEK3-203ENST00000551355 ELOVL4Q9GZR5 314 aa11.06□□□□□ -0.64
NEK3-203ENST00000551355 MIS12Q9H081 205 aa11.06□□□□□ -0.64
NEK3-203ENST00000551355 SEPT11Q9NVA2 429 aaKnown RBP11.06□□□□□ -0.64
NEK3-203ENST00000551355 DDX43Q9NXZ2 648 aaKnown RBP11.06□□□□□ -0.64
NEK3-203ENST00000551355 SPG21Q9NZD8 308 aa11.06□□□□□ -0.64
NEK3-203ENST00000551355 HESX1Q9UBX0 185 aa11.06□□□□□ -0.64
NEK3-203ENST00000551355 NAGPAQ9UK23 515 aa11.06□□□□□ -0.64
NEK3-203ENST00000551355 LTBP2Q14767 1821 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 OR6C75A6NL08 312 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 SPDYE4A6NLX3 237 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 DDX3XO00571 662 aaKnown RBP eCLIP11.05□□□□□ -0.642e-8■□□□□ 8.3
NEK3-203ENST00000551355 TLL1O43897 1013 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 B4GALT3O60512 393 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 RTN2O75298 545 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 MMEP08473 750 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 MYBL1P10243 752 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 CHRNB2P17787 502 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 PTPN1P18031 435 aaKnown RBP11.05□□□□□ -0.64
NEK3-203ENST00000551355 FGFR3P22607 806 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 MAGEA1P43355 309 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 MAGEA10P43363 369 aaPredicted RBP11.05□□□□□ -0.64
NEK3-203ENST00000551355 BRCC3P46736 316 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 TSPY1Q01534 308 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 FMO1Q01740 532 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 KRT17Q04695 432 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 GFPT1Q06210 699 aaPredicted RBP11.05□□□□□ -0.64
NEK3-203ENST00000551355 KIF5AQ12840 1032 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 SCN5AQ14524 2016 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 MTF1Q14872 753 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 USP41Q3LFD5 358 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 CCDC122Q5T0U0 273 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 TAF3Q5VWG9 929 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 FAM117BQ6P1L5 589 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 FUT10Q6P4F1 479 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 TOGARAM2Q6ZUX3 1019 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 ANKS3Q6ZW76 656 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 KIAA1328Q86T90 577 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 ACOT1Q86TX2 421 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 DCP1BQ8IZD4 617 aaKnown RBP11.05□□□□□ -0.64
NEK3-203ENST00000551355 COLGALT1Q8NBJ5 622 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 B3GALNT2Q8NCR0 500 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 HASPINQ8TF76 798 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 SLC20A1Q8WUM9 679 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 RABGGTAQ92696 567 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 CLP1Q92989 425 aaKnown RBP11.05□□□□□ -0.64
NEK3-203ENST00000551355 TMEM169Q96HH4 297 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 VCPIP1Q96JH7 1222 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 TTPALQ9BTX7 342 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 PLVAPQ9BX97 442 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 ISCUQ9H1K1 167 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 MARCH5Q9NX47 278 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 CXXC1Q9P0U4 656 aaPredicted RBP11.05□□□□□ -0.64
NEK3-203ENST00000551355 CACNG4Q9UBN1 327 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 PYCARDQ9ULZ3 195 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.05□□□□□ -0.64
NEK3-203ENST00000551355 SSX2IPQ9Y2D8 614 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 PPP2R2CQ9Y2T4 447 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 PCDHA13Q9Y5I0 950 aa11.05□□□□□ -0.64
NEK3-203ENST00000551355 MRPL42Q9Y6G3 142 aaKnown RBP11.05□□□□□ -0.64
NEK3-203ENST00000551355 O00370 1275 aa11.04□□□□□ -0.64
NEK3-203ENST00000551355 KRT86O43790 486 aa11.04□□□□□ -0.64
NEK3-203ENST00000551355 TUBB4AP04350 444 aa11.04□□□□□ -0.64
NEK3-203ENST00000551355 CYP1A1P04798 512 aaPredicted RBP11.04□□□□□ -0.64
NEK3-203ENST00000551355 ITGB1P05556 798 aa11.04□□□□□ -0.64
NEK3-203ENST00000551355 PDGFRBP09619 1106 aa11.04□□□□□ -0.64
NEK3-203ENST00000551355 H2AFZP0C0S5 128 aa11.04□□□□□ -0.64
NEK3-203ENST00000551355 SETSIPP0DME0 302 aa11.04□□□□□ -0.64
NEK3-203ENST00000551355 BRD2P25440 801 aaKnown RBP11.04□□□□□ -0.64
NEK3-203ENST00000551355 LMO2P25791 158 aa11.04□□□□□ -0.64
NEK3-203ENST00000551355 CDH5P33151 784 aaPredicted RBP11.04□□□□□ -0.64
NEK3-203ENST00000551355 NSFP46459 744 aaKnown RBP11.04□□□□□ -0.64
NEK3-203ENST00000551355 VAV2P52735 878 aa11.04□□□□□ -0.64
NEK3-203ENST00000551355 PLCB3Q01970 1234 aa11.04□□□□□ -0.64
NEK3-203ENST00000551355 CREMQ03060 361 aa11.04□□□□□ -0.64
NEK3-203ENST00000551355 MRPL58Q14197 206 aaKnown RBP11.04□□□□□ -0.64
NEK3-203ENST00000551355 CLEC16AQ2KHT3 1053 aa11.04□□□□□ -0.64
NEK3-203ENST00000551355 FAM171A1Q5VUB5 890 aa11.04□□□□□ -0.64
NEK3-203ENST00000551355 ACAD10Q6JQN1 1059 aa11.04□□□□□ -0.64
NEK3-203ENST00000551355 ZNF280DQ6N043 979 aa11.04□□□□□ -0.64
NEK3-203ENST00000551355 H2AFVQ71UI9 128 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms