RNA–Protein interactions for RNA: ENST00000551139.6

RNF10-225, Transcript of ring finger protein 10, human

TSL 3

Gene RNF10, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF10-225	ENST00000551139	CCDC192	P0DO97	292 aa		10.82	□□□□□ -0.68
RNF10-225	ENST00000551139	NMT1	P30419	496 aa	Known RBP	10.82	□□□□□ -0.68
RNF10-225	ENST00000551139	ABCD1	P33897	745 aa		10.82	□□□□□ -0.68
RNF10-225	ENST00000551139	PXN	P49023	591 aa	Predicted RBP	10.82	□□□□□ -0.68
RNF10-225	ENST00000551139	MCM2	P49736	904 aa		10.82	□□□□□ -0.68
RNF10-225	ENST00000551139	TAF6	P49848	677 aa		10.82	□□□□□ -0.68
RNF10-225	ENST00000551139	AMPD2	Q01433	879 aa		10.82	□□□□□ -0.68
RNF10-225	ENST00000551139	MAPK8IP2	Q13387	824 aa	Predicted RBP	10.82	□□□□□ -0.68
RNF10-225	ENST00000551139	CCIN	Q13939	588 aa		10.82	□□□□□ -0.68
RNF10-225	ENST00000551139	MCM6	Q14566	821 aa		10.82	□□□□□ -0.68
RNF10-225	ENST00000551139	SLFN12L	Q6IEE8	588 aa		10.82	□□□□□ -0.68
RNF10-225	ENST00000551139	CC2D1A	Q6P1N0	951 aa	Predicted RBP	10.82	□□□□□ -0.68
RNF10-225	ENST00000551139	WDR5B	Q86VZ2	330 aa		10.82	□□□□□ -0.68
RNF10-225	ENST00000551139	DCP1B	Q8IZD4	617 aa	Known RBP	10.82	□□□□□ -0.68
RNF10-225	ENST00000551139	MAB21L3	Q8N8X9	362 aa		10.82	□□□□□ -0.68
RNF10-225	ENST00000551139	SPPL2B	Q8TCT7	592 aa		10.82	□□□□□ -0.68
RNF10-225	ENST00000551139	DDX1	Q92499	740 aa	Known RBP	10.82	□□□□□ -0.68
RNF10-225	ENST00000551139	SLC46A2	Q9BY10	475 aa		10.82	□□□□□ -0.68
RNF10-225	ENST00000551139	ZCWPW1	Q9H0M4	648 aa		10.82	□□□□□ -0.68
RNF10-225	ENST00000551139	ARRDC1-AS1	Q9H2J1	176 aa		10.82	□□□□□ -0.68
RNF10-225	ENST00000551139	ASB7	Q9H672	318 aa		10.82	□□□□□ -0.68
RNF10-225	ENST00000551139	C2orf42	Q9NWW7	574 aa		10.82	□□□□□ -0.68
RNF10-225	ENST00000551139	DPP3	Q9NY33	737 aa		10.82	□□□□□ -0.68
RNF10-225	ENST00000551139	AGO2	Q9UKV8	859 aa	Known RBP	10.82	□□□□□ -0.68
RNF10-225	ENST00000551139	MAGED2	Q9UNF1	606 aa	Predicted RBP	10.82	□□□□□ -0.68
RNF10-225	ENST00000551139	DERA	Q9Y315	318 aa		10.82	□□□□□ -0.68
RNF10-225	ENST00000551139	CACNA1B	Q00975	2339 aa		10.81	□□□□□ -0.68
RNF10-225	ENST00000551139	COL4A2	P08572	1712 aa		10.81	□□□□□ -0.68
RNF10-225	ENST00000551139	SDK1	Q7Z5N4	2213 aa		10.81	□□□□□ -0.68
RNF10-225	ENST00000551139	ANO9	A1A5B4	782 aa		10.81	□□□□□ -0.68
RNF10-225	ENST00000551139	ANKRD63	C9JTQ0	380 aa		10.81	□□□□□ -0.68
RNF10-225	ENST00000551139	SLC26A4	O43511	780 aa		10.81	□□□□□ -0.68
RNF10-225	ENST00000551139	FAM189A1	O60320	539 aa		10.81	□□□□□ -0.68
RNF10-225	ENST00000551139	ATG13	O75143	517 aa		10.81	□□□□□ -0.68
RNF10-225	ENST00000551139	RPP40	O75818	363 aa	Known RBP	10.81	□□□□□ -0.68
RNF10-225	ENST00000551139	CYP11A1	P05108	521 aa		10.81	□□□□□ -0.68
RNF10-225	ENST00000551139	ATF6	P18850	670 aa		10.81	□□□□□ -0.68
RNF10-225	ENST00000551139	GJB2	P29033	226 aa		10.81	□□□□□ -0.68
RNF10-225	ENST00000551139	WEE1	P30291	646 aa		10.81	□□□□□ -0.68
RNF10-225	ENST00000551139	HOXA6	P31267	233 aa		10.81	□□□□□ -0.68
RNF10-225	ENST00000551139	HOXC13	P31276	330 aa		10.81	□□□□□ -0.68
RNF10-225	ENST00000551139	SMARCB1	Q12824	385 aa		10.81	□□□□□ -0.68
RNF10-225	ENST00000551139	RUNX3	Q13761	415 aa		10.81	□□□□□ -0.68
RNF10-225	ENST00000551139	CCDC6	Q16204	474 aa		10.81	□□□□□ -0.68
RNF10-225	ENST00000551139	ST3GAL2	Q16842	350 aa		10.81	□□□□□ -0.68
RNF10-225	ENST00000551139	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	10.81	□□□□□ -0.68
RNF10-225	ENST00000551139	WDR44	Q5JSH3	913 aa		10.81	□□□□□ -0.68
RNF10-225	ENST00000551139	WSCD1	Q658N2	575 aa		10.81	□□□□□ -0.68
RNF10-225	ENST00000551139	CACNA2D4	Q7Z3S7	1137 aa		10.81	□□□□□ -0.68
RNF10-225	ENST00000551139	CMTM8	Q8IZV2	173 aa		10.81	□□□□□ -0.68
RNF10-225	ENST00000551139	KRI1	Q8N9T8	703 aa	Known RBP	10.81	□□□□□ -0.68
RNF10-225	ENST00000551139	C2orf15	Q8WU43	125 aa	Known RBP	10.81	□□□□□ -0.68
RNF10-225	ENST00000551139	POMGNT1	Q8WZA1	660 aa		10.81	□□□□□ -0.68
RNF10-225	ENST00000551139	EBF3	Q9H4W6	596 aa		10.81	□□□□□ -0.68
RNF10-225	ENST00000551139	ZMYM5	Q9UJ78	669 aa		10.81	□□□□□ -0.68
RNF10-225	ENST00000551139	PCDHB5	Q9Y5E4	795 aa		10.81	□□□□□ -0.68
RNF10-225	ENST00000551139	KPNA7	A9QM74	516 aa		10.8	□□□□□ -0.68
RNF10-225	ENST00000551139	PRPF40A	O75400	957 aa	Known RBP	10.8	□□□□□ -0.68
RNF10-225	ENST00000551139	HAPLN1	P10915	354 aa	Predicted RBP	10.8	□□□□□ -0.68
RNF10-225	ENST00000551139	PLCG1	P19174	1290 aa		10.8	□□□□□ -0.68
RNF10-225	ENST00000551139	ZNF131	P52739	623 aa		10.8	□□□□□ -0.68
RNF10-225	ENST00000551139	GTF2B	Q00403	316 aa		10.8	□□□□□ -0.68
RNF10-225	ENST00000551139	TSPY1	Q01534	308 aa		10.8	□□□□□ -0.68
RNF10-225	ENST00000551139	KARS	Q15046	597 aa	Known RBP	10.8	□□□□□ -0.68
RNF10-225	ENST00000551139	SF3A2	Q15428	464 aa	Known RBP	10.8	□□□□□ -0.68
RNF10-225	ENST00000551139	SV2C	Q496J9	727 aa		10.8	□□□□□ -0.68
RNF10-225	ENST00000551139	TXNDC8	Q6A555	127 aa		10.8	□□□□□ -0.68
RNF10-225	ENST00000551139	TRIM68	Q6AZZ1	485 aa		10.8	□□□□□ -0.68
RNF10-225	ENST00000551139	SLC39A4	Q6P5W5	647 aa		10.8	□□□□□ -0.68
RNF10-225	ENST00000551139	LRRTM3	Q86VH5	581 aa		10.8	□□□□□ -0.68
RNF10-225	ENST00000551139	GAB3	Q8WWW8	586 aa		10.8	□□□□□ -0.68
RNF10-225	ENST00000551139	MRPS31	Q92665	395 aa	Known RBP	10.8	□□□□□ -0.68
RNF10-225	ENST00000551139	RAD54L	Q92698	747 aa		10.8	□□□□□ -0.68
RNF10-225	ENST00000551139	EXOC4	Q96A65	974 aa		10.8	□□□□□ -0.68
RNF10-225	ENST00000551139	KIF2C	Q99661	725 aa		10.8	□□□□□ -0.68
RNF10-225	ENST00000551139	PI4K2A	Q9BTU6	479 aa		10.8	□□□□□ -0.68
RNF10-225	ENST00000551139	IL21	Q9HBE4	155 aa		10.8	□□□□□ -0.68
RNF10-225	ENST00000551139	TDP1	Q9NUW8	608 aa		10.8	□□□□□ -0.68
RNF10-225	ENST00000551139	CCL26	Q9Y258	94 aa		10.8	□□□□□ -0.68
RNF10-225	ENST00000551139	C2CD2	Q9Y426	696 aa		10.8	□□□□□ -0.68
RNF10-225	ENST00000551139	ATG2B	Q96BY7	2078 aa		10.8	□□□□□ -0.68
RNF10-225	ENST00000551139	ANK1	P16157	1881 aa		10.79	□□□□□ -0.68
RNF10-225	ENST00000551139	KIF26A	Q9ULI4	1882 aa	Predicted RBP	10.79	□□□□□ -0.68
RNF10-225	ENST00000551139	TISP43	B9A030	160 aa		10.79	□□□□□ -0.68
RNF10-225	ENST00000551139	CSH1	P0DML2	217 aa		10.79	□□□□□ -0.68
RNF10-225	ENST00000551139	CSH2	P0DML3	217 aa		10.79	□□□□□ -0.68
RNF10-225	ENST00000551139	DDX6	P26196	483 aa	Known RBP eCLIP	10.79	□□□□□ -0.68
RNF10-225	ENST00000551139	LONP1	P36776	959 aa	Known RBP	10.79	□□□□□ -0.68
RNF10-225	ENST00000551139	NLRP12	P59046	1061 aa		10.79	□□□□□ -0.68
RNF10-225	ENST00000551139	TFAM	Q00059	246 aa	Known RBP	10.79	□□□□□ -0.68
RNF10-225	ENST00000551139	PSMD2	Q13200	908 aa		10.79	□□□□□ -0.68
RNF10-225	ENST00000551139	POSTN	Q15063	836 aa		10.79	□□□□□ -0.68
RNF10-225	ENST00000551139	TMEM196	Q5HYL7	178 aa		10.79	□□□□□ -0.68
RNF10-225	ENST00000551139	ERICH6B	Q5W0A0	696 aa		10.79	□□□□□ -0.68
RNF10-225	ENST00000551139	FSTL4	Q6MZW2	842 aa		10.79	□□□□□ -0.68
RNF10-225	ENST00000551139	PKN3	Q6P5Z2	889 aa		10.79	□□□□□ -0.68
RNF10-225	ENST00000551139	DYM	Q7RTS9	669 aa		10.79	□□□□□ -0.68
RNF10-225	ENST00000551139	KBTBD6	Q86V97	674 aa		10.79	□□□□□ -0.68
RNF10-225	ENST00000551139	NOC3L	Q8WTT2	800 aa	Known RBP	10.79	□□□□□ -0.68
RNF10-225	ENST00000551139	LARP4B	Q92615	738 aa	Known RBP	10.79	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms