RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 APPL2Q8NEU8 664 aa13.35□□□□□ -0.27
CACNB3-217ENST00000550483 CYFIP2Q96F07 1278 aa13.35□□□□□ -0.27
CACNB3-217ENST00000550483 TNIP3Q96KP6 325 aa13.35□□□□□ -0.27
CACNB3-217ENST00000550483 NAP1L3Q99457 506 aaPredicted RBP13.35□□□□□ -0.27
CACNB3-217ENST00000550483 ADAM2Q99965 735 aa13.35□□□□□ -0.27
CACNB3-217ENST00000550483 NUP85Q9BW27 656 aa13.35□□□□□ -0.27
CACNB3-217ENST00000550483 PLVAPQ9BX97 442 aa13.35□□□□□ -0.27
CACNB3-217ENST00000550483 CRISPLD2Q9H0B8 497 aa13.35□□□□□ -0.27
CACNB3-217ENST00000550483 TRPV6Q9H1D0 765 aa13.35□□□□□ -0.27
CACNB3-217ENST00000550483 TSPYL2Q9H2G4 693 aaPredicted RBP13.35□□□□□ -0.27
CACNB3-217ENST00000550483 RNF39Q9H2S5 420 aa13.35□□□□□ -0.27
CACNB3-217ENST00000550483 ELAC1Q9H777 363 aaKnown RBP13.35□□□□□ -0.27
CACNB3-217ENST00000550483 ACP6Q9NPH0 428 aa13.35□□□□□ -0.27
CACNB3-217ENST00000550483 PARVAQ9NVD7 372 aa13.35□□□□□ -0.27
CACNB3-217ENST00000550483 KLK14Q9P0G3 267 aa13.35□□□□□ -0.27
CACNB3-217ENST00000550483 KANSL3Q9P2N6 904 aa13.35□□□□□ -0.27
CACNB3-217ENST00000550483 TTC28Q96AY4 2481 aa13.34□□□□□ -0.27
CACNB3-217ENST00000550483 HOXA2O43364 376 aa13.34□□□□□ -0.27
CACNB3-217ENST00000550483 BUB1BO60566 1050 aaPredicted RBP13.34□□□□□ -0.27
CACNB3-217ENST00000550483 TADA3O75528 432 aa13.34□□□□□ -0.27
CACNB3-217ENST00000550483 WARSP23381 471 aaKnown RBP13.34□□□□□ -0.27
CACNB3-217ENST00000550483 BRD2P25440 801 aaKnown RBP13.34□□□□□ -0.27
CACNB3-217ENST00000550483 MAN1A1P33908 653 aa13.34□□□□□ -0.27
CACNB3-217ENST00000550483 MLH1P40692 756 aa13.34□□□□□ -0.27
CACNB3-217ENST00000550483 NDST1P52848 882 aa13.34□□□□□ -0.27
CACNB3-217ENST00000550483 ARHGAP17Q68EM7 881 aa13.34□□□□□ -0.27
CACNB3-217ENST00000550483 PLEKHA7Q6IQ23 1121 aa13.34□□□□□ -0.27
CACNB3-217ENST00000550483 TRAF7Q6Q0C0 670 aa13.34□□□□□ -0.27
CACNB3-217ENST00000550483 LCLAT1Q6UWP7 414 aa13.34□□□□□ -0.27
CACNB3-217ENST00000550483 AGMOQ6ZNB7 445 aa13.34□□□□□ -0.27
CACNB3-217ENST00000550483 ANKRD33Q7Z3H0 272 aa13.34□□□□□ -0.27
CACNB3-217ENST00000550483 NT5DC3Q86UY8 548 aa13.34□□□□□ -0.27
CACNB3-217ENST00000550483 ERICH1Q86X53 443 aa13.34□□□□□ -0.27
CACNB3-217ENST00000550483 ECHDC2Q86YB7 292 aa13.34□□□□□ -0.27
CACNB3-217ENST00000550483 IPO4Q8TEX9 1081 aaKnown RBP13.34□□□□□ -0.27
CACNB3-217ENST00000550483 WHAMMQ8TF30 809 aa13.34□□□□□ -0.27
CACNB3-217ENST00000550483 SEPT8Q92599 483 aa13.34□□□□□ -0.27
CACNB3-217ENST00000550483 RABGGTAQ92696 567 aa13.34□□□□□ -0.27
CACNB3-217ENST00000550483 C18orf25Q96B23 403 aaPredicted RBP13.34□□□□□ -0.27
CACNB3-217ENST00000550483 ARHGEF26Q96DR7 871 aa13.34□□□□□ -0.27
CACNB3-217ENST00000550483 HES6Q96HZ4 224 aa13.34□□□□□ -0.27
CACNB3-217ENST00000550483 HEXIM2Q96MH2 286 aaKnown RBP13.34□□□□□ -0.27
CACNB3-217ENST00000550483 ELOVL4Q9GZR5 314 aa13.34□□□□□ -0.27
CACNB3-217ENST00000550483 SDCBP2Q9H190 292 aa13.34□□□□□ -0.27
CACNB3-217ENST00000550483 WNT8AQ9H1J5 351 aa13.34□□□□□ -0.27
CACNB3-217ENST00000550483 CARD9Q9H257 536 aa13.34□□□□□ -0.27
CACNB3-217ENST00000550483 SNX25Q9H3E2 840 aa13.34□□□□□ -0.27
CACNB3-217ENST00000550483 DSEQ9UL01 958 aa13.34□□□□□ -0.27
CACNB3-217ENST00000550483 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.34□□□□□ -0.27
CACNB3-217ENST00000550483 TRIP12Q14669 1992 aaPredicted RBP13.34□□□□□ -0.27
CACNB3-217ENST00000550483 CCDC66A2RUB6 948 aa13.33□□□□□ -0.28
CACNB3-217ENST00000550483 ARL5CA6NH57 179 aa13.33□□□□□ -0.28
CACNB3-217ENST00000550483 DCDC2CA8MYV0 355 aa13.33□□□□□ -0.28
CACNB3-217ENST00000550483 MYO1FO00160 1098 aa13.33□□□□□ -0.28
CACNB3-217ENST00000550483 O00370 1275 aa13.33□□□□□ -0.28
CACNB3-217ENST00000550483 FTCDO95954 541 aa13.33□□□□□ -0.28
CACNB3-217ENST00000550483 GUCY2FP51841 1108 aa13.33□□□□□ -0.28
CACNB3-217ENST00000550483 LILRA4P59901 499 aa13.33□□□□□ -0.28
CACNB3-217ENST00000550483 FAM189BP81408 668 aa13.33□□□□□ -0.28
CACNB3-217ENST00000550483 TUSC3Q13454 348 aa13.33□□□□□ -0.28
CACNB3-217ENST00000550483 PPP2R5EQ16537 467 aa13.33□□□□□ -0.28
CACNB3-217ENST00000550483 ZNF394Q53GI3 561 aa13.33□□□□□ -0.28
CACNB3-217ENST00000550483 GLB1LQ6UWU2 654 aa13.33□□□□□ -0.28
CACNB3-217ENST00000550483 ZNF598Q86UK7 904 aaKnown RBP13.33□□□□□ -0.28
CACNB3-217ENST00000550483 CRYBG2Q8N1P7 616 aa13.33□□□□□ -0.28
CACNB3-217ENST00000550483 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.33□□□□□ -0.28
CACNB3-217ENST00000550483 URGCPQ8TCY9 931 aa13.33□□□□□ -0.28
CACNB3-217ENST00000550483 STK32AQ8WU08 396 aa13.33□□□□□ -0.28
CACNB3-217ENST00000550483 CPA5Q8WXQ8 436 aa13.33□□□□□ -0.28
CACNB3-217ENST00000550483 RUBCNQ92622 972 aa13.33□□□□□ -0.28
CACNB3-217ENST00000550483 ELMO3Q96BJ8 720 aa13.33□□□□□ -0.28
CACNB3-217ENST00000550483 GAD1Q99259 594 aa13.33□□□□□ -0.28
CACNB3-217ENST00000550483 OSGEPQ9NPF4 335 aa13.33□□□□□ -0.28
CACNB3-217ENST00000550483 CYLDQ9NQC7 956 aa13.33□□□□□ -0.28
CACNB3-217ENST00000550483 HESX1Q9UBX0 185 aa13.33□□□□□ -0.28
CACNB3-217ENST00000550483 TTC7AQ9ULT0 858 aaPredicted RBP13.33□□□□□ -0.28
CACNB3-217ENST00000550483 STXBP5LQ9Y2K9 1186 aa13.33□□□□□ -0.28
CACNB3-217ENST00000550483 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.33□□□□□ -0.28
CACNB3-217ENST00000550483 PDCD11Q14690 1871 aaKnown RBP13.33□□□□□ -0.28
CACNB3-217ENST00000550483 A8MXQ7 604 aa13.32□□□□□ -0.28
CACNB3-217ENST00000550483 C9IYK1 514 aa13.32□□□□□ -0.28
CACNB3-217ENST00000550483 PODXLO00592 558 aa13.32□□□□□ -0.28
CACNB3-217ENST00000550483 TFRCP02786 760 aaKnown RBP13.32□□□□□ -0.28
CACNB3-217ENST00000550483 MCM3P25205 808 aa13.32□□□□□ -0.28
CACNB3-217ENST00000550483 CTNNA2P26232 953 aa13.32□□□□□ -0.28
CACNB3-217ENST00000550483 GNL1P36915 607 aaPredicted RBP13.32□□□□□ -0.28
CACNB3-217ENST00000550483 RAP1GAPP47736 663 aa13.32□□□□□ -0.28
CACNB3-217ENST00000550483 LHX1P48742 406 aa13.32□□□□□ -0.28
CACNB3-217ENST00000550483 CDH8P55286 799 aa13.32□□□□□ -0.28
CACNB3-217ENST00000550483 SLC8A3P57103 927 aa13.32□□□□□ -0.28
CACNB3-217ENST00000550483 ZNF268Q14587 947 aaPredicted RBP13.32□□□□□ -0.28
CACNB3-217ENST00000550483 SOWAHAQ2M3V2 549 aa13.32□□□□□ -0.28
CACNB3-217ENST00000550483 RSRC2Q7L4I2 434 aaKnown RBP13.32□□□□□ -0.28
CACNB3-217ENST00000550483 ZDHHC17Q8IUH5 632 aa13.32□□□□□ -0.28
CACNB3-217ENST00000550483 ADGRF2Q8IZF7 708 aa13.32□□□□□ -0.28
CACNB3-217ENST00000550483 GPR161Q8N6U8 529 aaKnown RBP13.32□□□□□ -0.28
CACNB3-217ENST00000550483 C3orf20Q8ND61 904 aa13.32□□□□□ -0.28
CACNB3-217ENST00000550483 GSTCDQ8NEC7 633 aa13.32□□□□□ -0.28
CACNB3-217ENST00000550483 OR6B3Q8NGW1 331 aa13.32□□□□□ -0.28
CACNB3-217ENST00000550483 ACTRT1Q8TDG2 376 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms