RNA–Protein interactions for RNA: ENST00000550385.1

CHPT1-206, Transcript of choline phosphotransferase 1, humanhuman

TSL 5

Gene CHPT1, Length 754 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-206ENST00000550385 TRIM72Q6ZMU5 477 aa11.31□□□□□ -0.6
CHPT1-206ENST00000550385 ZNF571Q7Z3V5 609 aaPredicted RBP11.31□□□□□ -0.6
CHPT1-206ENST00000550385 SLC47A2Q86VL8 602 aa11.31□□□□□ -0.6
CHPT1-206ENST00000550385 CRYBG2Q8N1P7 616 aa11.31□□□□□ -0.6
CHPT1-206ENST00000550385 EPS8L1Q8TE68 723 aa11.31□□□□□ -0.6
CHPT1-206ENST00000550385 ZNF606Q8WXB4 792 aa11.31□□□□□ -0.6
CHPT1-206ENST00000550385 RABGGTAQ92696 567 aa11.31□□□□□ -0.6
CHPT1-206ENST00000550385 HEXIM2Q96MH2 286 aaKnown RBP11.31□□□□□ -0.6
CHPT1-206ENST00000550385 EIF3CQ99613 913 aaKnown RBP11.31□□□□□ -0.6
CHPT1-206ENST00000550385 MRPL45Q9BRJ2 306 aaKnown RBP11.31□□□□□ -0.6
CHPT1-206ENST00000550385 KCNF1Q9H3M0 494 aa11.31□□□□□ -0.6
CHPT1-206ENST00000550385 ADAMTS1Q9UHI8 967 aa11.31□□□□□ -0.6
CHPT1-206ENST00000550385 PUF60Q9UHX1 559 aaKnown RBP11.31□□□□□ -0.6
CHPT1-206ENST00000550385 STXBP5LQ9Y2K9 1186 aa11.31□□□□□ -0.6
CHPT1-206ENST00000550385 RWDD3Q9Y3V2 267 aa11.31□□□□□ -0.6
CHPT1-206ENST00000550385 PCDHB12Q9Y5F1 795 aa11.31□□□□□ -0.6
CHPT1-206ENST00000550385 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.31□□□□□ -0.66e-8■□□□□ 10.4
CHPT1-206ENST00000550385 SCN1AP35498 2009 aa11.31□□□□□ -0.6
CHPT1-206ENST00000550385 SF3B1O75533 1304 aaKnown RBP eCLIP11.31□□□□□ -0.68e-6■■■■■ 107
CHPT1-206ENST00000550385 SOWAHDA6NJG2 315 aa11.3□□□□□ -0.6
CHPT1-206ENST00000550385 ZSCAN12O43309 604 aa11.3□□□□□ -0.6
CHPT1-206ENST00000550385 TLL1O43897 1013 aa11.3□□□□□ -0.6
CHPT1-206ENST00000550385 OAZ2O95190 189 aa11.3□□□□□ -0.6
CHPT1-206ENST00000550385 LCA5LO95447 670 aa11.3□□□□□ -0.6
CHPT1-206ENST00000550385 GZMAP12544 262 aa11.3□□□□□ -0.6
CHPT1-206ENST00000550385 CD19P15391 556 aa11.3□□□□□ -0.6
CHPT1-206ENST00000550385 MAGEA10P43363 369 aaPredicted RBP11.3□□□□□ -0.6
CHPT1-206ENST00000550385 KIF11P52732 1056 aa11.3□□□□□ -0.6
CHPT1-206ENST00000550385 KRT17Q04695 432 aa11.3□□□□□ -0.6
CHPT1-206ENST00000550385 YWHAHQ04917 246 aaPredicted RBP11.3□□□□□ -0.6
CHPT1-206ENST00000550385 CNGA2Q16280 664 aa11.3□□□□□ -0.6
CHPT1-206ENST00000550385 ASTE1Q2TB18 679 aaPredicted RBP11.3□□□□□ -0.6
CHPT1-206ENST00000550385 SGO2Q562F6 1265 aa11.3□□□□□ -0.6
CHPT1-206ENST00000550385 OVOS1Q6IE37 1185 aa11.3□□□□□ -0.6
CHPT1-206ENST00000550385 FUT10Q6P4F1 479 aa11.3□□□□□ -0.6
CHPT1-206ENST00000550385 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.3□□□□□ -0.6
CHPT1-206ENST00000550385 SLC4A11Q8NBS3 891 aa11.3□□□□□ -0.6
CHPT1-206ENST00000550385 WHAMMQ8TF30 809 aa11.3□□□□□ -0.6
CHPT1-206ENST00000550385 HASPINQ8TF76 798 aa11.3□□□□□ -0.6
CHPT1-206ENST00000550385 KBTBD7Q8WVZ9 684 aa11.3□□□□□ -0.6
CHPT1-206ENST00000550385 TMEM169Q96HH4 297 aa11.3□□□□□ -0.6
CHPT1-206ENST00000550385 IGSF21Q96ID5 467 aa11.3□□□□□ -0.6
CHPT1-206ENST00000550385 ACBD6Q9BR61 282 aa11.3□□□□□ -0.6
CHPT1-206ENST00000550385 ZNF518BQ9C0D4 1074 aa11.3□□□□□ -0.6
CHPT1-206ENST00000550385 DDX43Q9NXZ2 648 aaKnown RBP11.3□□□□□ -0.6
CHPT1-206ENST00000550385 SPG21Q9NZD8 308 aa11.3□□□□□ -0.6
CHPT1-206ENST00000550385 CXXC1Q9P0U4 656 aaPredicted RBP11.3□□□□□ -0.6
CHPT1-206ENST00000550385 CACNG4Q9UBN1 327 aa11.3□□□□□ -0.6
CHPT1-206ENST00000550385 NOCTQ9UK39 431 aaKnown RBP11.3□□□□□ -0.6
CHPT1-206ENST00000550385 CDH9Q9ULB4 789 aa11.3□□□□□ -0.6
CHPT1-206ENST00000550385 ZKSCAN5Q9Y2L8 839 aa11.3□□□□□ -0.6
CHPT1-206ENST00000550385 CEP83Q9Y592 693 aa11.3□□□□□ -0.6
CHPT1-206ENST00000550385 FNDC1Q4ZHG4 1894 aaPredicted RBP11.29□□□□□ -0.6
CHPT1-206ENST00000550385 H7C4K7 107 aa11.29□□□□□ -0.6
CHPT1-206ENST00000550385 B4GALT3O60512 393 aa11.29□□□□□ -0.6
CHPT1-206ENST00000550385 PLEKP08567 350 aaPredicted RBP11.29□□□□□ -0.6
CHPT1-206ENST00000550385 PDGFRBP09619 1106 aa11.29□□□□□ -0.6
CHPT1-206ENST00000550385 CCDC175P0C221 793 aa11.29□□□□□ -0.6
CHPT1-206ENST00000550385 MAPRE1Q15691 268 aaKnown RBP11.29□□□□□ -0.6
CHPT1-206ENST00000550385 FAM171A1Q5VUB5 890 aa11.29□□□□□ -0.6
CHPT1-206ENST00000550385 ALKBH5Q6P6C2 394 aaKnown RBP11.29□□□□□ -0.6
CHPT1-206ENST00000550385 RAD9BQ6WBX8 426 aa11.29□□□□□ -0.6
CHPT1-206ENST00000550385 NOP9Q86U38 636 aaKnown RBP11.29□□□□□ -0.6
CHPT1-206ENST00000550385 COLGALT1Q8NBJ5 622 aa11.29□□□□□ -0.6
CHPT1-206ENST00000550385 DDX1Q92499 740 aaKnown RBP11.29□□□□□ -0.6
CHPT1-206ENST00000550385 CLP1Q92989 425 aaKnown RBP11.29□□□□□ -0.6
CHPT1-206ENST00000550385 RNPC3Q96LT9 517 aaKnown RBP11.29□□□□□ -0.6
CHPT1-206ENST00000550385 UBE2OQ9C0C9 1292 aaKnown RBP11.29□□□□□ -0.6
CHPT1-206ENST00000550385 ELOVL4Q9GZR5 314 aa11.29□□□□□ -0.6
CHPT1-206ENST00000550385 LHX5Q9H2C1 402 aa11.29□□□□□ -0.6
CHPT1-206ENST00000550385 SEPT11Q9NVA2 429 aaKnown RBP11.29□□□□□ -0.6
CHPT1-206ENST00000550385 MARCH5Q9NX47 278 aa11.29□□□□□ -0.6
CHPT1-206ENST00000550385 HESX1Q9UBX0 185 aa11.29□□□□□ -0.6
CHPT1-206ENST00000550385 PCDHGC3Q9UN70 934 aa11.29□□□□□ -0.6
CHPT1-206ENST00000550385 SSX2IPQ9Y2D8 614 aa11.29□□□□□ -0.6
CHPT1-206ENST00000550385 MRPL42Q9Y6G3 142 aaKnown RBP11.29□□□□□ -0.6
CHPT1-206ENST00000550385 OR6C75A6NL08 312 aa11.28□□□□□ -0.6
CHPT1-206ENST00000550385 NT5C1B-RDH14C9J2C7 533 aa11.28□□□□□ -0.6
CHPT1-206ENST00000550385 DDX3XO00571 662 aaKnown RBP eCLIP11.28□□□□□ -0.66e-10■■■■■ 32.6
CHPT1-206ENST00000550385 RTN2O75298 545 aa11.28□□□□□ -0.6
CHPT1-206ENST00000550385 LSM8O95777 96 aaKnown RBP11.28□□□□□ -0.6
CHPT1-206ENST00000550385 ITGB1P05556 798 aa11.28□□□□□ -0.6
CHPT1-206ENST00000550385 MMEP08473 750 aa11.28□□□□□ -0.6
CHPT1-206ENST00000550385 PTPN1P18031 435 aaKnown RBP11.28□□□□□ -0.6
CHPT1-206ENST00000550385 FGFR3P22607 806 aa11.28□□□□□ -0.6
CHPT1-206ENST00000550385 IGFBP6P24592 240 aaPredicted RBP11.28□□□□□ -0.6
CHPT1-206ENST00000550385 LMO2P25791 158 aa11.28□□□□□ -0.6
CHPT1-206ENST00000550385 MSNP26038 577 aaKnown RBP11.28□□□□□ -0.6
CHPT1-206ENST00000550385 MAGEA1P43355 309 aa11.28□□□□□ -0.6
CHPT1-206ENST00000550385 SLC8A3P57103 927 aa11.28□□□□□ -0.6
CHPT1-206ENST00000550385 SNX16P57768 344 aa11.28□□□□□ -0.6
CHPT1-206ENST00000550385 TSPY1Q01534 308 aa11.28□□□□□ -0.6
CHPT1-206ENST00000550385 FMO1Q01740 532 aa11.28□□□□□ -0.6
CHPT1-206ENST00000550385 SMARCB1Q12824 385 aa11.28□□□□□ -0.6
CHPT1-206ENST00000550385 MRPL58Q14197 206 aaKnown RBP11.28□□□□□ -0.6
CHPT1-206ENST00000550385 USP41Q3LFD5 358 aa11.28□□□□□ -0.6
CHPT1-206ENST00000550385 CCDC122Q5T0U0 273 aa11.28□□□□□ -0.6
CHPT1-206ENST00000550385 TAF3Q5VWG9 929 aa11.28□□□□□ -0.6
CHPT1-206ENST00000550385 ARHGAP17Q68EM7 881 aa11.28□□□□□ -0.6
CHPT1-206ENST00000550385 LCLAT1Q6UWP7 414 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms