RNA–Protein interactions for RNA: ENST00000550069.1

PFDN5-209, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-209ENST00000550069 MAFGO15525 162 aa6.21□□□□□ -1.42
PFDN5-209ENST00000550069 ZBED4O75132 1171 aa6.21□□□□□ -1.42
PFDN5-209ENST00000550069 ENO2P09104 434 aaPredicted RBP6.21□□□□□ -1.42
PFDN5-209ENST00000550069 MSNP26038 577 aaKnown RBP6.21□□□□□ -1.42
PFDN5-209ENST00000550069 KIF5BP33176 963 aa6.21□□□□□ -1.42
PFDN5-209ENST00000550069 SLC1A4P43007 532 aa6.21□□□□□ -1.42
PFDN5-209ENST00000550069 UBXN2AP68543 259 aa6.21□□□□□ -1.42
PFDN5-209ENST00000550069 IL13RA1P78552 427 aa6.21□□□□□ -1.42
PFDN5-209ENST00000550069 DLK2Q6UY11 383 aa6.21□□□□□ -1.42
PFDN5-209ENST00000550069 DDX53Q86TM3 631 aaKnown RBP6.21□□□□□ -1.42
PFDN5-209ENST00000550069 NOP9Q86U38 636 aaKnown RBP6.21□□□□□ -1.42
PFDN5-209ENST00000550069 LRRTM3Q86VH5 581 aa6.21□□□□□ -1.42
PFDN5-209ENST00000550069 SGMS1Q86VZ5 419 aa6.21□□□□□ -1.42
PFDN5-209ENST00000550069 ZSCAN30Q86W11 494 aa6.21□□□□□ -1.42
PFDN5-209ENST00000550069 NXPE1Q8N323 547 aa6.21□□□□□ -1.42
PFDN5-209ENST00000550069 ZNF713Q8N859 430 aaPredicted RBP6.21□□□□□ -1.42
PFDN5-209ENST00000550069 GPATCH11Q8N954 259 aa6.21□□□□□ -1.42
PFDN5-209ENST00000550069 IGDCC4Q8TDY8 1250 aa6.21□□□□□ -1.42
PFDN5-209ENST00000550069 DYNLL2Q96FJ2 89 aa6.21□□□□□ -1.42
PFDN5-209ENST00000550069 CEP95Q96GE4 821 aa6.21□□□□□ -1.42
PFDN5-209ENST00000550069 SLF1Q9BQI6 1058 aa6.21□□□□□ -1.42
PFDN5-209ENST00000550069 TEX13BQ9BXU2 312 aa6.21□□□□□ -1.42
PFDN5-209ENST00000550069 SEZ6LQ9BYH1 1024 aa6.21□□□□□ -1.42
PFDN5-209ENST00000550069 LSG1Q9H089 658 aaKnown RBP6.21□□□□□ -1.42
PFDN5-209ENST00000550069 GLT8D2Q9H1C3 349 aa6.21□□□□□ -1.42
PFDN5-209ENST00000550069 RPAP3Q9H6T3 665 aaPredicted RBP6.21□□□□□ -1.42
PFDN5-209ENST00000550069 KCNH7Q9NS40 1196 aa6.21□□□□□ -1.42
PFDN5-209ENST00000550069 SRRDQ9UH36 339 aa6.21□□□□□ -1.42
PFDN5-209ENST00000550069 STX8Q9UNK0 236 aa6.21□□□□□ -1.42
PFDN5-209ENST00000550069 NUB1Q9Y5A7 615 aa6.21□□□□□ -1.42
PFDN5-209ENST00000550069 CTDP1Q9Y5B0 961 aaPredicted RBP6.21□□□□□ -1.42
PFDN5-209ENST00000550069 PLXNA1Q9UIW2 1896 aa6.21□□□□□ -1.42
PFDN5-209ENST00000550069 KIAA0100Q14667 2235 aaKnown RBP6.2□□□□□ -1.42
PFDN5-209ENST00000550069 A0A1W2PRG0 241 aa6.2□□□□□ -1.42
PFDN5-209ENST00000550069 B4GALT3O60512 393 aa6.2□□□□□ -1.42
PFDN5-209ENST00000550069 FLOT1O75955 427 aa6.2□□□□□ -1.42
PFDN5-209ENST00000550069 CYP21A2P08686 494 aa6.2□□□□□ -1.42
PFDN5-209ENST00000550069 XRCC6P12956 609 aaKnown RBP eCLIP6.2□□□□□ -1.42
PFDN5-209ENST00000550069 PTGS1P23219 599 aa6.2□□□□□ -1.42
PFDN5-209ENST00000550069 HSPA4P34932 840 aa6.2□□□□□ -1.42
PFDN5-209ENST00000550069 CNR2P34972 360 aa6.2□□□□□ -1.42
PFDN5-209ENST00000550069 GJA4P35212 333 aa6.2□□□□□ -1.42
PFDN5-209ENST00000550069 RGS2P41220 211 aa6.2□□□□□ -1.42
PFDN5-209ENST00000550069 CCDC173Q0VFZ6 552 aa6.2□□□□□ -1.42
PFDN5-209ENST00000550069 RRP1BQ14684 758 aaKnown RBP6.2□□□□□ -1.42
PFDN5-209ENST00000550069 IFIT1BQ5T764 474 aaKnown RBP6.2□□□□□ -1.42
PFDN5-209ENST00000550069 VPS53Q5VIR6 699 aa6.2□□□□□ -1.42
PFDN5-209ENST00000550069 SLFN13Q68D06 897 aa6.2□□□□□ -1.42
PFDN5-209ENST00000550069 SYNE3Q6ZMZ3 975 aa6.2□□□□□ -1.42
PFDN5-209ENST00000550069 GPR155Q7Z3F1 870 aa6.2□□□□□ -1.42
PFDN5-209ENST00000550069 EGFL6Q8IUX8 553 aa6.2□□□□□ -1.42
PFDN5-209ENST00000550069 FOXRED1Q96CU9 486 aaPredicted RBP6.2□□□□□ -1.42
PFDN5-209ENST00000550069 TIGD1Q96MW7 591 aa6.2□□□□□ -1.42
PFDN5-209ENST00000550069 GBP4Q96PP9 640 aa6.2□□□□□ -1.42
PFDN5-209ENST00000550069 ALDH8A1Q9H2A2 487 aaPredicted RBP6.2□□□□□ -1.42
PFDN5-209ENST00000550069 KAT14Q9H8E8 782 aa6.2□□□□□ -1.42
PFDN5-209ENST00000550069 L2HGDHQ9H9P8 463 aa6.2□□□□□ -1.42
PFDN5-209ENST00000550069 TOMM22Q9NS69 142 aa6.2□□□□□ -1.42
PFDN5-209ENST00000550069 CALCOCO1Q9P1Z2 691 aa6.2□□□□□ -1.42
PFDN5-209ENST00000550069 ARHGAP28Q9P2N2 729 aa6.2□□□□□ -1.42
PFDN5-209ENST00000550069 MAGEC2Q9UBF1 373 aaPredicted RBP6.2□□□□□ -1.42
PFDN5-209ENST00000550069 CLIP2Q9UDT6 1046 aa6.2□□□□□ -1.42
PFDN5-209ENST00000550069 RBM8AQ9Y5S9 174 aaKnown RBP6.2□□□□□ -1.42
PFDN5-209ENST00000550069 PFASO15067 1338 aa6.2□□□□□ -1.42
PFDN5-209ENST00000550069 PLXNB2O15031 1838 aa6.2□□□□□ -1.42
PFDN5-209ENST00000550069 TLDC2A0PJX2 215 aa6.19□□□□□ -1.42
PFDN5-209ENST00000550069 E7EWF7 191 aa6.19□□□□□ -1.42
PFDN5-209ENST00000550069 VWA5AO00534 786 aa6.19□□□□□ -1.42
PFDN5-209ENST00000550069 TNPO2O14787 897 aaKnown RBP6.19□□□□□ -1.42
PFDN5-209ENST00000550069 NDUFB10O96000 172 aa6.19□□□□□ -1.42
PFDN5-209ENST00000550069 CYP2D6P10635 497 aa6.19□□□□□ -1.42
PFDN5-209ENST00000550069 PDHBP11177 359 aa6.19□□□□□ -1.42
PFDN5-209ENST00000550069 PTX3P26022 381 aaPredicted RBP6.19□□□□□ -1.42
PFDN5-209ENST00000550069 STAT3P40763 770 aa6.19□□□□□ -1.42
PFDN5-209ENST00000550069 PSMC4P43686 418 aa6.19□□□□□ -1.42
PFDN5-209ENST00000550069 EVCP57679 992 aa6.19□□□□□ -1.42
PFDN5-209ENST00000550069 GJA9P57773 515 aa6.19□□□□□ -1.42
PFDN5-209ENST00000550069 SATB1Q01826 763 aa6.19□□□□□ -1.42
PFDN5-209ENST00000550069 GHRHRQ02643 423 aa6.19□□□□□ -1.42
PFDN5-209ENST00000550069 GABPB1Q06547 395 aaPredicted RBP6.19□□□□□ -1.42
PFDN5-209ENST00000550069 WTAPQ15007 396 aa6.19□□□□□ -1.42
PFDN5-209ENST00000550069 ANKRD1Q15327 319 aa6.19□□□□□ -1.42
PFDN5-209ENST00000550069 SMAD2Q15796 467 aaKnown RBP6.19□□□□□ -1.42
PFDN5-209ENST00000550069 FAM26FQ5R3K3 315 aa6.19□□□□□ -1.42
PFDN5-209ENST00000550069 TREML2Q5T2D2 321 aa6.19□□□□□ -1.42
PFDN5-209ENST00000550069 CCDC129Q6ZRS4 1044 aa6.19□□□□□ -1.42
PFDN5-209ENST00000550069 EP400NLQ6ZTU2 488 aa6.19□□□□□ -1.42
PFDN5-209ENST00000550069 PLEKHH3Q7Z736 793 aa6.19□□□□□ -1.42
PFDN5-209ENST00000550069 CATIPQ7Z7H3 387 aa6.19□□□□□ -1.42
PFDN5-209ENST00000550069 SLC44A5Q8NCS7 719 aa6.19□□□□□ -1.42
PFDN5-209ENST00000550069 ERCC4Q92889 916 aaPredicted RBP6.19□□□□□ -1.42
PFDN5-209ENST00000550069 NEK1Q96PY6 1258 aa6.19□□□□□ -1.42
PFDN5-209ENST00000550069 MYCBPQ99417 103 aaPredicted RBP6.19□□□□□ -1.42
PFDN5-209ENST00000550069 P2RX7Q99572 595 aaKnown RBP6.19□□□□□ -1.42
PFDN5-209ENST00000550069 BOCQ9BWV1 1114 aa6.19□□□□□ -1.42
PFDN5-209ENST00000550069 AGXT2Q9BYV1 514 aa6.19□□□□□ -1.42
PFDN5-209ENST00000550069 SPATC1LQ9H0A9 340 aa6.19□□□□□ -1.42
PFDN5-209ENST00000550069 UPF2Q9HAU5 1272 aaKnown RBP6.19□□□□□ -1.42
PFDN5-209ENST00000550069 SLC38A10Q9HBR0 1119 aa6.19□□□□□ -1.42
PFDN5-209ENST00000550069 IL17RBQ9NRM6 502 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms