RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 A0A1W2PRU2 124 aa20.05■□□□□ 0.8
CHMP1A-207ENST00000549328 PROB1E7EW31 1015 aa20.05■□□□□ 0.8
CHMP1A-207ENST00000549328 ACTN4O43707 911 aaKnown RBP20.05■□□□□ 0.8
CHMP1A-207ENST00000549328 SOAT2O75908 522 aa20.05■□□□□ 0.8
CHMP1A-207ENST00000549328 HAPLN1P10915 354 aaPredicted RBP20.05■□□□□ 0.8
CHMP1A-207ENST00000549328 PSMC3P17980 439 aa20.05■□□□□ 0.8
CHMP1A-207ENST00000549328 BFSP1Q12934 665 aa20.05■□□□□ 0.8
CHMP1A-207ENST00000549328 MYO1EQ12965 1108 aa20.05■□□□□ 0.8
CHMP1A-207ENST00000549328 SNRNP35Q16560 246 aaKnown RBP20.05■□□□□ 0.8
CHMP1A-207ENST00000549328 MGAT5BQ3V5L5 792 aa20.05■□□□□ 0.8
CHMP1A-207ENST00000549328 C12orf56Q8IXR9 622 aa20.05■□□□□ 0.8
CHMP1A-207ENST00000549328 TOP6BLQ8N6T0 577 aa20.05■□□□□ 0.8
CHMP1A-207ENST00000549328 XXYLT1Q8NBI6 393 aa20.05■□□□□ 0.8
CHMP1A-207ENST00000549328 OR5B17Q8NGF7 314 aa20.05■□□□□ 0.8
CHMP1A-207ENST00000549328 DEPDC1BQ8WUY9 529 aa20.05■□□□□ 0.8
CHMP1A-207ENST00000549328 NELL2Q99435 816 aa20.05■□□□□ 0.8
CHMP1A-207ENST00000549328 SEPT5Q99719 369 aaPredicted RBP20.05■□□□□ 0.8
CHMP1A-207ENST00000549328 SLITRK6Q9H5Y7 841 aa20.05■□□□□ 0.8
CHMP1A-207ENST00000549328 SLC39A2Q9NP94 309 aa20.05■□□□□ 0.8
CHMP1A-207ENST00000549328 TRPV5Q9NQA5 729 aa20.05■□□□□ 0.8
CHMP1A-207ENST00000549328 PCDHB5Q9Y5E4 795 aa20.05■□□□□ 0.8
CHMP1A-207ENST00000549328 ATP6V1DQ9Y5K8 247 aa20.05■□□□□ 0.8
CHMP1A-207ENST00000549328 SNX9Q9Y5X1 595 aa20.05■□□□□ 0.8
CHMP1A-207ENST00000549328 PTPRJQ12913 1337 aa20.04■□□□□ 0.8
CHMP1A-207ENST00000549328 MYL1P05976 194 aa20.04■□□□□ 0.8
CHMP1A-207ENST00000549328 ATF6P18850 670 aa20.04■□□□□ 0.8
CHMP1A-207ENST00000549328 NBL1P41271 181 aa20.04■□□□□ 0.8
CHMP1A-207ENST00000549328 LHX1P48742 406 aa20.04■□□□□ 0.8
CHMP1A-207ENST00000549328 MYL7Q01449 175 aa20.04■□□□□ 0.8
CHMP1A-207ENST00000549328 PSMD2Q13200 908 aa20.04■□□□□ 0.8
CHMP1A-207ENST00000549328 ANGPT1Q15389 498 aa20.04■□□□□ 0.8
CHMP1A-207ENST00000549328 KNOP1Q1ED39 458 aaKnown RBP20.04■□□□□ 0.8
CHMP1A-207ENST00000549328 SCARA3Q6AZY7 606 aa20.04■□□□□ 0.8
CHMP1A-207ENST00000549328 GAREM2Q75VX8 874 aa20.04■□□□□ 0.8
CHMP1A-207ENST00000549328 MFSD6LQ8IWD5 586 aa20.04■□□□□ 0.8
CHMP1A-207ENST00000549328 NELFCDQ8IXH7 590 aa20.04■□□□□ 0.8
CHMP1A-207ENST00000549328 IRF7Q92985 503 aa20.04■□□□□ 0.8
CHMP1A-207ENST00000549328 PAGE5Q96GU1 130 aa20.04■□□□□ 0.8
CHMP1A-207ENST00000549328 HPDLQ96IR7 371 aa20.04■□□□□ 0.8
CHMP1A-207ENST00000549328 FAM84AQ96KN4 292 aa20.04■□□□□ 0.8
CHMP1A-207ENST00000549328 FOXQ1Q9C009 403 aa20.04■□□□□ 0.8
CHMP1A-207ENST00000549328 BRD9Q9H8M2 597 aa20.04■□□□□ 0.8
CHMP1A-207ENST00000549328 DDX43Q9NXZ2 648 aaKnown RBP20.04■□□□□ 0.8
CHMP1A-207ENST00000549328 HPSEQ9Y251 543 aa20.04■□□□□ 0.8
CHMP1A-207ENST00000549328 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.03■□□□□ 0.8
CHMP1A-207ENST00000549328 A0A1B0GVL5 298 aa20.03■□□□□ 0.8
CHMP1A-207ENST00000549328 GABRDO14764 452 aa20.03■□□□□ 0.8
CHMP1A-207ENST00000549328 CLIC2O15247 247 aa20.03■□□□□ 0.8
CHMP1A-207ENST00000549328 KLRC4O43908 158 aa20.03■□□□□ 0.8
CHMP1A-207ENST00000549328 PRPF40AO75400 957 aaKnown RBP20.03■□□□□ 0.8
CHMP1A-207ENST00000549328 DCNP07585 359 aaKnown RBP20.03■□□□□ 0.8
CHMP1A-207ENST00000549328 PFKFB1P16118 471 aa20.03■□□□□ 0.8
CHMP1A-207ENST00000549328 PSMD6Q15008 389 aa20.03■□□□□ 0.8
CHMP1A-207ENST00000549328 LMBRD2Q68DH5 695 aaPredicted RBP20.03■□□□□ 0.8
CHMP1A-207ENST00000549328 VITQ6UXI7 678 aa20.03■□□□□ 0.8
CHMP1A-207ENST00000549328 LIMS2Q7Z4I7 341 aa20.03■□□□□ 0.8
CHMP1A-207ENST00000549328 GRAMD1CQ8IYS0 662 aa20.03■□□□□ 0.8
CHMP1A-207ENST00000549328 RDH13Q8NBN7 331 aa20.03■□□□□ 0.8
CHMP1A-207ENST00000549328 GOLGA5Q8TBA6 731 aa20.03■□□□□ 0.8
CHMP1A-207ENST00000549328 FAM200AQ8TCP9 573 aa20.03■□□□□ 0.8
CHMP1A-207ENST00000549328 FNBP1Q96RU3 617 aa20.03■□□□□ 0.8
CHMP1A-207ENST00000549328 ATXN3LQ9H3M9 355 aa20.03■□□□□ 0.8
CHMP1A-207ENST00000549328 ZNF334Q9HCZ1 680 aaPredicted RBP20.03■□□□□ 0.8
CHMP1A-207ENST00000549328 ABCB6Q9NP58 842 aa20.03■□□□□ 0.8
CHMP1A-207ENST00000549328 ABI2Q9NYB9 513 aaPredicted RBP20.03■□□□□ 0.8
CHMP1A-207ENST00000549328 FAM237AA0A1B0GTK4 181 aa20.02■□□□□ 0.8
CHMP1A-207ENST00000549328 GABRR2P28476 465 aa20.02■□□□□ 0.8
CHMP1A-207ENST00000549328 PCSK1P29120 753 aa20.02■□□□□ 0.8
CHMP1A-207ENST00000549328 WEE1P30291 646 aa20.02■□□□□ 0.8
CHMP1A-207ENST00000549328 CDC25CP30307 473 aa20.02■□□□□ 0.8
CHMP1A-207ENST00000549328 VIPR2P41587 438 aa20.02■□□□□ 0.8
CHMP1A-207ENST00000549328 CYP2J2P51589 502 aa20.02■□□□□ 0.8
CHMP1A-207ENST00000549328 CYP24A1Q07973 514 aa20.02■□□□□ 0.8
CHMP1A-207ENST00000549328 GRM2Q14416 872 aa20.02■□□□□ 0.8
CHMP1A-207ENST00000549328 TAF12Q16514 161 aa20.02■□□□□ 0.8
CHMP1A-207ENST00000549328 SOWAHAQ2M3V2 549 aa20.02■□□□□ 0.8
CHMP1A-207ENST00000549328 ARHGAP15Q53QZ3 475 aa20.02■□□□□ 0.8
CHMP1A-207ENST00000549328 INTS6LQ5JSJ4 861 aaKnown RBP20.02■□□□□ 0.8
CHMP1A-207ENST00000549328 TRAPPC11Q7Z392 1133 aa20.02■□□□□ 0.8
CHMP1A-207ENST00000549328 ADGRF2Q8IZF7 708 aa20.02■□□□□ 0.8
CHMP1A-207ENST00000549328 LPIN3Q9BQK8 851 aa20.02■□□□□ 0.8
CHMP1A-207ENST00000549328 SCAND2PQ9GZW5 306 aaPredicted RBP20.02■□□□□ 0.8
CHMP1A-207ENST00000549328 LTB4R2Q9NPC1 389 aa20.02■□□□□ 0.8
CHMP1A-207ENST00000549328 TMLHEQ9NVH6 421 aa20.02■□□□□ 0.8
CHMP1A-207ENST00000549328 ZMYM5Q9UJ78 669 aa20.02■□□□□ 0.8
CHMP1A-207ENST00000549328 HEPACAM2A8MVW5 462 aa20.01■□□□□ 0.79
CHMP1A-207ENST00000549328 DLATP10515 647 aaKnown RBP20.01■□□□□ 0.79
CHMP1A-207ENST00000549328 TNNI1P19237 187 aa20.01■□□□□ 0.79
CHMP1A-207ENST00000549328 GDI1P31150 447 aa20.01■□□□□ 0.79
CHMP1A-207ENST00000549328 MAGEA9P43362 315 aa20.01■□□□□ 0.79
CHMP1A-207ENST00000549328 STK4Q13043 487 aa20.01■□□□□ 0.79
CHMP1A-207ENST00000549328 ZNF852Q6ZMS4 543 aa20.01■□□□□ 0.79
CHMP1A-207ENST00000549328 TPRG1Q6ZUI0 275 aa20.01■□□□□ 0.79
CHMP1A-207ENST00000549328 ARID3BQ8IVW6 561 aaPredicted RBP20.01■□□□□ 0.79
CHMP1A-207ENST00000549328 TMEM174Q8WUU8 243 aa20.01■□□□□ 0.79
CHMP1A-207ENST00000549328 PKMYT1Q99640 499 aa20.01■□□□□ 0.79
CHMP1A-207ENST00000549328 CGRRF1Q99675 332 aa20.01■□□□□ 0.79
CHMP1A-207ENST00000549328 MKNK1Q9BUB5 465 aa20.01■□□□□ 0.79
CHMP1A-207ENST00000549328 IL21Q9HBE4 155 aa20.01■□□□□ 0.79
CHMP1A-207ENST00000549328 HEBP1Q9NRV9 189 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms