RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 KLF1Q13351 362 aaPredicted RBP5.24□□□□□ -1.57
SCAF11-212ENST00000549162 VARS2Q5ST30 1063 aaKnown RBP5.24□□□□□ -1.57
SCAF11-212ENST00000549162 ALKBH2Q6NS38 261 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 POTEBQ6S5H4 581 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 ZBTB33Q86T24 672 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 TLK2Q86UE8 772 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 ZNF516Q92618 1163 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 CASD1Q96PB1 797 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 ACBD6Q9BR61 282 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 LRRC3Q9BY71 257 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 OSBPL7Q9BZF2 842 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 HOMER2Q9NSB8 354 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 TCEAL9Q9UHQ7 104 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 SIX4Q9UIU6 781 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 GTF3C4Q9UKN8 822 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 TMEM229AB2RXF0 380 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 SGPL1O95470 568 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 CTCFP49711 727 aaPredicted RBP5.24□□□□□ -1.57
SCAF11-212ENST00000549162 CDR2Q01850 454 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 USP4Q13107 963 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 FSCN1Q16658 493 aaKnown RBP5.24□□□□□ -1.57
SCAF11-212ENST00000549162 MPP7Q5T2T1 576 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 SLC39A5Q6ZMH5 540 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 DDX53Q86TM3 631 aaKnown RBP5.24□□□□□ -1.57
SCAF11-212ENST00000549162 LCA5Q86VQ0 697 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 GPBP1Q86WP2 473 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 ANKRD7Q92527 254 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 ATP13A1Q9HD20 1204 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 HSPBP1Q9NZL4 362 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.24□□□□□ -1.57
SCAF11-212ENST00000549162 GOLGA6L6A8MZA4 724 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 EIF1AYO14602 144 aaKnown RBP5.24□□□□□ -1.57
SCAF11-212ENST00000549162 RNF40O75150 1001 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 AKAP3O75969 853 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 TIMP1P01033 207 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 ACADSBP45954 432 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 POLD2P49005 469 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 VEGFBP49765 207 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 FXR1P51114 621 aaKnown RBP eCLIP5.24□□□□□ -1.57
SCAF11-212ENST00000549162 VAV2P52735 878 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 PSMC6P62333 389 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 NOLC1Q14978 699 aaKnown RBP eCLIP5.24□□□□□ -1.57
SCAF11-212ENST00000549162 UPP1Q16831 310 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 NOTUMQ6P988 496 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 SASS6Q6UVJ0 657 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 STRADAQ7RTN6 431 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 KATNAL2Q8IYT4 538 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 CPXM2Q8N436 756 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 SLC7A14Q8TBB6 771 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 LMBR1Q8WVP7 490 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 PGBD4Q96DM1 585 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 AP1M1Q9BXS5 423 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 CDT1Q9H211 546 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.24□□□□□ -1.57
SCAF11-212ENST00000549162 TMEM45AQ9NWC5 275 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 PCYOX1Q9UHG3 505 aa5.24□□□□□ -1.57
SCAF11-212ENST00000549162 UBQLN1Q9UMX0 589 aaKnown RBP5.24□□□□□ -1.57
SCAF11-212ENST00000549162 SCN1AP35498 2009 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 CETN3O15182 167 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 EIF3HO15372 352 aaKnown RBP eCLIP5.23□□□□□ -1.571e-8■■■□□ 15.2
SCAF11-212ENST00000549162 CHRNA1P02708 482 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 ZNF165P49910 485 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 ACLYP53396 1101 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 BFSP2Q13515 415 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 PRPF4BQ13523 1007 aaKnown RBP5.23□□□□□ -1.57
SCAF11-212ENST00000549162 CTTNQ14247 550 aaKnown RBP5.23□□□□□ -1.57
SCAF11-212ENST00000549162 E2F5Q15329 346 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 ZNF174Q15697 407 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 ANO6Q4KMQ2 910 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 STXBP5Q5T5C0 1151 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 LILRA6Q6PI73 481 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 CACTINQ8WUQ7 758 aaKnown RBP5.23□□□□□ -1.57
SCAF11-212ENST00000549162 ASB12Q8WXK4 309 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 TBC1D5Q92609 795 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 NMRK2Q9NPI5 230 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 CLIC5Q9NZA1 410 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 PCDHB11Q9Y5F2 797 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 GMEB1Q9Y692 573 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 PCDH15Q96QU1 1955 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 A0A1W2PQ45 241 aaPredicted RBP5.23□□□□□ -1.57
SCAF11-212ENST00000549162 A0A1W2PQY0 241 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 GOLGA6L3A6NEY3 463 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 RTN2O75298 545 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 PEX5P50542 639 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 PDE6CP51160 858 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 SUOXP51687 545 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 SIX1Q15475 284 aaPredicted RBP5.23□□□□□ -1.57
SCAF11-212ENST00000549162 MAPRE1Q15691 268 aaKnown RBP5.23□□□□□ -1.57
SCAF11-212ENST00000549162 TTC39BQ5VTQ0 682 aaPredicted RBP5.23□□□□□ -1.57
SCAF11-212ENST00000549162 DCLRE1AQ6PJP8 1040 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 SFR1Q86XK3 245 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 CCDC24Q8N4L8 307 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 SEC16BQ96JE7 1060 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 CNOT6LQ96LI5 555 aaKnown RBP5.23□□□□□ -1.57
SCAF11-212ENST00000549162 RANBP9Q96S59 729 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 LRRC2Q9BYS8 371 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 TMEM117Q9H0C3 514 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 PDE11AQ9HCR9 933 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 CDH9Q9ULB4 789 aa5.23□□□□□ -1.57
SCAF11-212ENST00000549162 A0A1B0GVL5 298 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms