RNA–Protein interactions for RNA: ENST00000548863.1

CNOT2-215, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-215ENST00000548863 TBCCQ15814 346 aa5.79□□□□□ -1.48
CNOT2-215ENST00000548863 AARS2Q5JTZ9 985 aaKnown RBP5.79□□□□□ -1.48
CNOT2-215ENST00000548863 RBM20Q5T481 1227 aaKnown RBP5.79□□□□□ -1.48
CNOT2-215ENST00000548863 ZNF618Q5T7W0 954 aa5.79□□□□□ -1.48
CNOT2-215ENST00000548863 NECAB2Q7Z6G3 386 aa5.79□□□□□ -1.48
CNOT2-215ENST00000548863 YTHDF3Q7Z739 585 aaKnown RBP5.79□□□□□ -1.48
CNOT2-215ENST00000548863 NELL2Q99435 816 aa5.79□□□□□ -1.48
CNOT2-215ENST00000548863 SMOC2Q9H3U7 446 aa5.79□□□□□ -1.48
CNOT2-215ENST00000548863 SLC5A4Q9NY91 659 aa5.79□□□□□ -1.48
CNOT2-215ENST00000548863 TBC1D30Q9Y2I9 924 aa5.79□□□□□ -1.48
CNOT2-215ENST00000548863 PRKAB1Q9Y478 270 aa5.79□□□□□ -1.48
CNOT2-215ENST00000548863 TISP43B9A030 160 aa5.78□□□□□ -1.48
CNOT2-215ENST00000548863 GNAI3P08754 354 aa5.78□□□□□ -1.48
CNOT2-215ENST00000548863 FTH1P19P0C7X4 201 aa5.78□□□□□ -1.48
CNOT2-215ENST00000548863 ITGALP20701 1170 aa5.78□□□□□ -1.48
CNOT2-215ENST00000548863 GNAI1P63096 354 aa5.78□□□□□ -1.48
CNOT2-215ENST00000548863 SLC30A10Q6XR72 485 aa5.78□□□□□ -1.48
CNOT2-215ENST00000548863 SLC29A4Q7RTT9 530 aa5.78□□□□□ -1.48
CNOT2-215ENST00000548863 ZNF804AQ7Z570 1209 aa5.78□□□□□ -1.48
CNOT2-215ENST00000548863 PPP1R32Q7Z5V6 425 aa5.78□□□□□ -1.48
CNOT2-215ENST00000548863 DTX2Q86UW9 622 aa5.78□□□□□ -1.48
CNOT2-215ENST00000548863 TRIM38O00635 465 aa5.77□□□□□ -1.49
CNOT2-215ENST00000548863 ADAMTS3O15072 1205 aa5.77□□□□□ -1.49
CNOT2-215ENST00000548863 PCDHGA12O60330 932 aa5.77□□□□□ -1.49
CNOT2-215ENST00000548863 TOB1P50616 345 aaPredicted RBP5.77□□□□□ -1.49
CNOT2-215ENST00000548863 DSC2Q02487 901 aa5.77□□□□□ -1.49
CNOT2-215ENST00000548863 KHDC1Q4VXA5 237 aaKnown RBP5.77□□□□□ -1.49
CNOT2-215ENST00000548863 SLC18B1Q6NT16 456 aa5.77□□□□□ -1.49
CNOT2-215ENST00000548863 SLC4A10Q6U841 1118 aa5.77□□□□□ -1.49
CNOT2-215ENST00000548863 WDR53Q7Z5U6 358 aaPredicted RBP5.77□□□□□ -1.49
CNOT2-215ENST00000548863 KLHDC4Q8TBB5 520 aa5.77□□□□□ -1.49
CNOT2-215ENST00000548863 DENND1AQ8TEH3 1009 aa5.77□□□□□ -1.49
CNOT2-215ENST00000548863 VRK1Q99986 396 aaPredicted RBP5.77□□□□□ -1.49
CNOT2-215ENST00000548863 SH2B3Q9UQQ2 575 aa5.77□□□□□ -1.49
CNOT2-215ENST00000548863 PCDHGA9Q9Y5G4 932 aaKnown RBP5.77□□□□□ -1.49
CNOT2-215ENST00000548863 PCDHGA8Q9Y5G5 932 aa5.77□□□□□ -1.49
CNOT2-215ENST00000548863 PCDHGA7Q9Y5G6 932 aa5.77□□□□□ -1.49
CNOT2-215ENST00000548863 PCDHGA6Q9Y5G7 932 aa5.77□□□□□ -1.49
CNOT2-215ENST00000548863 PCDHGA3Q9Y5H0 932 aa5.77□□□□□ -1.49
CNOT2-215ENST00000548863 ZNF785A8K8V0 405 aa5.76□□□□□ -1.49
CNOT2-215ENST00000548863 PRRT4C9JH25 899 aa5.76□□□□□ -1.49
CNOT2-215ENST00000548863 PPEF2O14830 753 aa5.76□□□□□ -1.49
CNOT2-215ENST00000548863 CLSTN1O94985 981 aa5.76□□□□□ -1.49
CNOT2-215ENST00000548863 TOP3BO95985 862 aaKnown RBP5.76□□□□□ -1.49
CNOT2-215ENST00000548863 NHLRC4P0CG21 123 aaPredicted RBP5.76□□□□□ -1.49
CNOT2-215ENST00000548863 CD6P30203 668 aa5.76□□□□□ -1.49
CNOT2-215ENST00000548863 IARSP41252 1262 aaKnown RBP5.76□□□□□ -1.49
CNOT2-215ENST00000548863 ALDH9A1P49189 494 aa5.76□□□□□ -1.49
CNOT2-215ENST00000548863 FOXG1P55316 489 aaPredicted RBP5.76□□□□□ -1.49
CNOT2-215ENST00000548863 LAMB3Q13751 1172 aa5.76□□□□□ -1.49
CNOT2-215ENST00000548863 KIF22Q14807 665 aa5.76□□□□□ -1.49
CNOT2-215ENST00000548863 ACAP2Q15057 778 aa5.76□□□□□ -1.49
CNOT2-215ENST00000548863 CEP78Q5JTW2 689 aa5.76□□□□□ -1.49
CNOT2-215ENST00000548863 PRAMEF17Q5VTA0 474 aa5.76□□□□□ -1.49
CNOT2-215ENST00000548863 KAT5Q92993 513 aa5.76□□□□□ -1.49
CNOT2-215ENST00000548863 TMEM79Q9BSE2 394 aa5.76□□□□□ -1.49
CNOT2-215ENST00000548863 QTRT1Q9BXR0 403 aaKnown RBP5.76□□□□□ -1.49
CNOT2-215ENST00000548863 FAM126AQ9BYI3 521 aaPredicted RBP5.76□□□□□ -1.49
CNOT2-215ENST00000548863 MCM8Q9UJA3 840 aa5.76□□□□□ -1.49
CNOT2-215ENST00000548863 RAD54BQ9Y620 910 aa5.76□□□□□ -1.49
CNOT2-215ENST00000548863 ONECUT2O95948 504 aa5.75□□□□□ -1.49
CNOT2-215ENST00000548863 RARBP10826 455 aa5.75□□□□□ -1.49
CNOT2-215ENST00000548863 MPGP29372 298 aa5.75□□□□□ -1.49
CNOT2-215ENST00000548863 ZNF135P52742 658 aaPredicted RBP5.75□□□□□ -1.49
CNOT2-215ENST00000548863 PSMC1P62191 440 aaKnown RBP5.75□□□□□ -1.49
CNOT2-215ENST00000548863 VPS53Q5VIR6 699 aa5.75□□□□□ -1.49
CNOT2-215ENST00000548863 FAM90A1Q86YD7 464 aa5.75□□□□□ -1.49
CNOT2-215ENST00000548863 FANCBQ8NB91 859 aa5.75□□□□□ -1.49
CNOT2-215ENST00000548863 BRIP1Q9BX63 1249 aa5.75□□□□□ -1.49
CNOT2-215ENST00000548863 SERHLQ9NQF3 203 aa5.75□□□□□ -1.49
CNOT2-215ENST00000548863 MRPS18AQ9NVS2 196 aaKnown RBP5.75□□□□□ -1.49
CNOT2-215ENST00000548863 SH3BP4Q9P0V3 963 aa5.75□□□□□ -1.49
CNOT2-215ENST00000548863 ZDHHC8Q9ULC8 765 aa5.75□□□□□ -1.49
CNOT2-215ENST00000548863 POLHQ9Y253 713 aa5.75□□□□□ -1.49
CNOT2-215ENST00000548863 CYP2D7A0A087X1C5 515 aa5.74□□□□□ -1.49
CNOT2-215ENST00000548863 H0YIZ8 118 aa5.74□□□□□ -1.49
CNOT2-215ENST00000548863 FZD9O00144 591 aa5.74□□□□□ -1.49
CNOT2-215ENST00000548863 TLR5O60602 858 aa5.74□□□□□ -1.49
CNOT2-215ENST00000548863 ARIH2O95376 493 aa5.74□□□□□ -1.49
CNOT2-215ENST00000548863 SFPQP23246 707 aaKnown RBP eCLIP5.74□□□□□ -1.49
CNOT2-215ENST00000548863 PRDX5P30044 214 aa5.74□□□□□ -1.49
CNOT2-215ENST00000548863 KIF23Q02241 960 aaPredicted RBP5.74□□□□□ -1.49
CNOT2-215ENST00000548863 SUPT20HL1Q3ZLR7 823 aa5.74□□□□□ -1.49
CNOT2-215ENST00000548863 SFRP4Q6FHJ7 346 aaPredicted RBP5.74□□□□□ -1.49
CNOT2-215ENST00000548863 ZNF517Q6ZMY9 492 aaPredicted RBP5.74□□□□□ -1.49
CNOT2-215ENST00000548863 CATSPERGQ6ZRH7 1159 aa5.74□□□□□ -1.49
CNOT2-215ENST00000548863 KRT73Q86Y46 540 aa5.74□□□□□ -1.49
CNOT2-215ENST00000548863 DDX17Q92841 729 aaKnown RBP5.74□□□□□ -1.49
CNOT2-215ENST00000548863 TEKT5Q96M29 485 aa5.74□□□□□ -1.49
CNOT2-215ENST00000548863 PRSS22Q9GZN4 317 aa5.74□□□□□ -1.49
CNOT2-215ENST00000548863 DLL3Q9NYJ7 618 aa5.74□□□□□ -1.49
CNOT2-215ENST00000548863 AGAP1Q9UPQ3 857 aa5.74□□□□□ -1.49
CNOT2-215ENST00000548863 MRFAP1Q9Y605 127 aa5.74□□□□□ -1.49
CNOT2-215ENST00000548863 NTN1O95631 604 aa5.73□□□□□ -1.49
CNOT2-215ENST00000548863 CYP2D6P10635 497 aa5.73□□□□□ -1.49
CNOT2-215ENST00000548863 SMARCA1P28370 1054 aa5.73□□□□□ -1.49
CNOT2-215ENST00000548863 GCLCP48506 637 aaPredicted RBP5.73□□□□□ -1.49
CNOT2-215ENST00000548863 PIK3CGP48736 1102 aa5.73□□□□□ -1.49
CNOT2-215ENST00000548863 CCT4P50991 539 aaKnown RBP5.73□□□□□ -1.49
CNOT2-215ENST00000548863 ADKP55263 362 aaKnown RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms