RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 VEPH1Q14D04 833 aa18.75■□□□□ 0.59
CHMP1A-205ENST00000548650 E2F4Q16254 413 aa18.75■□□□□ 0.59
CHMP1A-205ENST00000548650 GPR158Q5T848 1215 aa18.75■□□□□ 0.59
CHMP1A-205ENST00000548650 SCARA3Q6AZY7 606 aa18.75■□□□□ 0.59
CHMP1A-205ENST00000548650 ARID3BQ8IVW6 561 aaPredicted RBP18.75■□□□□ 0.59
CHMP1A-205ENST00000548650 ZBTB44Q8NCP5 570 aa18.75■□□□□ 0.59
CHMP1A-205ENST00000548650 GLIS3Q8NEA6 775 aa18.75■□□□□ 0.59
CHMP1A-205ENST00000548650 SPPL2BQ8TCT7 592 aa18.75■□□□□ 0.59
CHMP1A-205ENST00000548650 FAM3CQ92520 227 aa18.75■□□□□ 0.59
CHMP1A-205ENST00000548650 LRRC3BQ96PB8 259 aa18.75■□□□□ 0.59
CHMP1A-205ENST00000548650 TNMDQ9H2S6 317 aa18.75■□□□□ 0.59
CHMP1A-205ENST00000548650 ABI2Q9NYB9 513 aaPredicted RBP18.75■□□□□ 0.59
CHMP1A-205ENST00000548650 GOLGA8IPA6NC78 632 aa18.74■□□□□ 0.59
CHMP1A-205ENST00000548650 GOLGA8JA6NMD2 632 aa18.74■□□□□ 0.59
CHMP1A-205ENST00000548650 EXTL3O43909 919 aa18.74■□□□□ 0.59
CHMP1A-205ENST00000548650 PRPF6O94906 941 aaKnown RBP18.74■□□□□ 0.59
CHMP1A-205ENST00000548650 LDHAP00338 332 aaKnown RBP18.74■□□□□ 0.59
CHMP1A-205ENST00000548650 HAPLN1P10915 354 aaPredicted RBP18.74■□□□□ 0.59
CHMP1A-205ENST00000548650 TDGF1P13385 188 aa18.74■□□□□ 0.59
CHMP1A-205ENST00000548650 MLLT6P55198 1093 aaPredicted RBP18.74■□□□□ 0.59
CHMP1A-205ENST00000548650 STK38Q15208 465 aa18.74■□□□□ 0.59
CHMP1A-205ENST00000548650 TSSK4Q6SA08 328 aa18.74■□□□□ 0.59
CHMP1A-205ENST00000548650 GPIHBP1Q8IV16 184 aa18.74■□□□□ 0.59
CHMP1A-205ENST00000548650 YAF2Q8IY57 180 aa18.74■□□□□ 0.59
CHMP1A-205ENST00000548650 SYCP3Q8IZU3 236 aa18.74■□□□□ 0.59
CHMP1A-205ENST00000548650 PDCL2Q8N4E4 241 aa18.74■□□□□ 0.59
CHMP1A-205ENST00000548650 LRRC52Q8N7C0 313 aa18.74■□□□□ 0.59
CHMP1A-205ENST00000548650 FAM200AQ8TCP9 573 aa18.74■□□□□ 0.59
CHMP1A-205ENST00000548650 MSANTD3Q96H12 275 aa18.74■□□□□ 0.59
CHMP1A-205ENST00000548650 IER2Q9BTL4 223 aa18.74■□□□□ 0.59
CHMP1A-205ENST00000548650 TMLHEQ9NVH6 421 aa18.74■□□□□ 0.59
CHMP1A-205ENST00000548650 ZSCAN32Q9NX65 697 aa18.74■□□□□ 0.59
CHMP1A-205ENST00000548650 OBP2AQ9NY56 170 aa18.74■□□□□ 0.59
CHMP1A-205ENST00000548650 ITGA11Q9UKX5 1188 aa18.74■□□□□ 0.59
CHMP1A-205ENST00000548650 L1RE1Q9UN81 338 aa18.74■□□□□ 0.59
CHMP1A-205ENST00000548650 AGAP1Q9UPQ3 857 aa18.74■□□□□ 0.59
CHMP1A-205ENST00000548650 PTPRDP23468 1912 aa18.74■□□□□ 0.59
CHMP1A-205ENST00000548650 SLC38A8A6NNN8 435 aa18.73■□□□□ 0.59
CHMP1A-205ENST00000548650 LILRB5O75023 590 aa18.73■□□□□ 0.59
CHMP1A-205ENST00000548650 CCNE1P24864 410 aa18.73■□□□□ 0.59
CHMP1A-205ENST00000548650 WEE1P30291 646 aa18.73■□□□□ 0.59
CHMP1A-205ENST00000548650 CDC25CP30307 473 aa18.73■□□□□ 0.59
CHMP1A-205ENST00000548650 SOX9P48436 509 aa18.73■□□□□ 0.59
CHMP1A-205ENST00000548650 ARHGAP15Q53QZ3 475 aa18.73■□□□□ 0.59
CHMP1A-205ENST00000548650 CCDC65Q8IXS2 484 aa18.73■□□□□ 0.59
CHMP1A-205ENST00000548650 DCP1BQ8IZD4 617 aaKnown RBP18.73■□□□□ 0.59
CHMP1A-205ENST00000548650 GIPC2Q8TF65 315 aa18.73■□□□□ 0.59
CHMP1A-205ENST00000548650 LEO1Q8WVC0 666 aaPredicted RBP18.73■□□□□ 0.59
CHMP1A-205ENST00000548650 RUBCNQ92622 972 aa18.73■□□□□ 0.59
CHMP1A-205ENST00000548650 HPS3Q969F9 1004 aa18.73■□□□□ 0.59
CHMP1A-205ENST00000548650 MTMR12Q9C0I1 747 aa18.73■□□□□ 0.59
CHMP1A-205ENST00000548650 TMEM206Q9H813 350 aa18.73■□□□□ 0.59
CHMP1A-205ENST00000548650 PDE11AQ9HCR9 933 aa18.73■□□□□ 0.59
CHMP1A-205ENST00000548650 KBTBD4Q9NVX7 518 aa18.73■□□□□ 0.59
CHMP1A-205ENST00000548650 SIX4Q9UIU6 781 aa18.73■□□□□ 0.59
CHMP1A-205ENST00000548650 PTPRJQ12913 1337 aa18.73■□□□□ 0.59
CHMP1A-205ENST00000548650 GREB1Q4ZG55 1949 aa18.72■□□□□ 0.59
CHMP1A-205ENST00000548650 SPTLC2O15270 562 aa18.72■□□□□ 0.59
CHMP1A-205ENST00000548650 CHRNB1P11230 501 aa18.72■□□□□ 0.59
CHMP1A-205ENST00000548650 TSPY1Q01534 308 aa18.72■□□□□ 0.59
CHMP1A-205ENST00000548650 BFSP1Q12934 665 aa18.72■□□□□ 0.59
CHMP1A-205ENST00000548650 WDR44Q5JSH3 913 aa18.72■□□□□ 0.59
CHMP1A-205ENST00000548650 TXNDC11Q6PKC3 985 aa18.72■□□□□ 0.59
CHMP1A-205ENST00000548650 MAMSTRQ6ZN01 415 aa18.72■□□□□ 0.59
CHMP1A-205ENST00000548650 TMEM150AQ86TG1 271 aa18.72■□□□□ 0.59
CHMP1A-205ENST00000548650 GPD1LQ8N335 351 aa18.72■□□□□ 0.59
CHMP1A-205ENST00000548650 CSGALNACT1Q8TDX6 532 aa18.72■□□□□ 0.59
CHMP1A-205ENST00000548650 ZFYVE19Q96K21 471 aa18.72■□□□□ 0.59
CHMP1A-205ENST00000548650 GCNAQ96QF7 691 aa18.72■□□□□ 0.59
CHMP1A-205ENST00000548650 PKMYT1Q99640 499 aa18.72■□□□□ 0.59
CHMP1A-205ENST00000548650 HINFPQ9BQA5 517 aa18.72■□□□□ 0.59
CHMP1A-205ENST00000548650 TRIM9Q9C026 710 aa18.72■□□□□ 0.59
CHMP1A-205ENST00000548650 EPC1Q9H2F5 836 aa18.72■□□□□ 0.59
CHMP1A-205ENST00000548650 PCIF1Q9H4Z3 704 aa18.72■□□□□ 0.59
CHMP1A-205ENST00000548650 TASP1Q9H6P5 420 aa18.72■□□□□ 0.59
CHMP1A-205ENST00000548650 PCDHB5Q9Y5E4 795 aa18.72■□□□□ 0.59
CHMP1A-205ENST00000548650 HELZP42694 1942 aaKnown RBP18.71■□□□□ 0.59
CHMP1A-205ENST00000548650 ANAPC1Q9H1A4 1944 aa18.71■□□□□ 0.59
CHMP1A-205ENST00000548650 PPP6R2O75170 966 aa18.71■□□□□ 0.59
CHMP1A-205ENST00000548650 HMGA1P17096 107 aaKnown RBP18.71■□□□□ 0.59
CHMP1A-205ENST00000548650 CTHP32929 405 aa18.71■□□□□ 0.59
CHMP1A-205ENST00000548650 HOXD13P35453 343 aa18.71■□□□□ 0.59
CHMP1A-205ENST00000548650 ID4P47928 161 aa18.71■□□□□ 0.59
CHMP1A-205ENST00000548650 GPR15P49685 360 aa18.71■□□□□ 0.59
CHMP1A-205ENST00000548650 CCDC142Q17RM4 750 aa18.71■□□□□ 0.59
CHMP1A-205ENST00000548650 ARHGAP29Q52LW3 1261 aa18.71■□□□□ 0.59
CHMP1A-205ENST00000548650 INTS6LQ5JSJ4 861 aaKnown RBP18.71■□□□□ 0.59
CHMP1A-205ENST00000548650 OSTM1Q86WC4 334 aa18.71■□□□□ 0.59
CHMP1A-205ENST00000548650 KIAA2013Q8IYS2 634 aa18.71■□□□□ 0.59
CHMP1A-205ENST00000548650 TMEM86AQ8N2M4 240 aa18.71■□□□□ 0.59
CHMP1A-205ENST00000548650 DCLK2Q8N568 766 aa18.71■□□□□ 0.59
CHMP1A-205ENST00000548650 STKLD1Q8NE28 680 aa18.71■□□□□ 0.59
CHMP1A-205ENST00000548650 NOC3LQ8WTT2 800 aaKnown RBP18.71■□□□□ 0.59
CHMP1A-205ENST00000548650 CACTINQ8WUQ7 758 aaKnown RBP18.71■□□□□ 0.59
CHMP1A-205ENST00000548650 ATRIPQ8WXE1 791 aa18.71■□□□□ 0.59
CHMP1A-205ENST00000548650 SMG9Q9H0W8 520 aaKnown RBP18.71■□□□□ 0.59
CHMP1A-205ENST00000548650 LMAN1LQ9HAT1 526 aa18.71■□□□□ 0.59
CHMP1A-205ENST00000548650 GDAP2Q9NXN4 497 aa18.71■□□□□ 0.59
CHMP1A-205ENST00000548650 SMG5Q9UPR3 1016 aaKnown RBP18.71■□□□□ 0.59
CHMP1A-205ENST00000548650 MYBPHLA2RUH7 354 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms