RNA–Protein interactions for RNA: ENST00000547861.5

CCDC65-203, Transcript of coiled-coil domain containing 65, humanhuman

TSL 2

Gene CCDC65, Length 1,746 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-203ENST00000547861 ASPAP45381 313 aa8.61□□□□□ -1.03
CCDC65-203ENST00000547861 SMAD3P84022 425 aaKnown RBP8.61□□□□□ -1.03
CCDC65-203ENST00000547861 FPGSQ05932 587 aa8.61□□□□□ -1.03
CCDC65-203ENST00000547861 TRPC3Q13507 836 aa8.61□□□□□ -1.03
CCDC65-203ENST00000547861 CCSAPQ6IQ19 270 aaPredicted RBP8.61□□□□□ -1.03
CCDC65-203ENST00000547861 CCNI2Q6ZMN8 369 aaPredicted RBP8.61□□□□□ -1.03
CCDC65-203ENST00000547861 ANKRD33Q7Z3H0 272 aa8.61□□□□□ -1.03
CCDC65-203ENST00000547861 TLK2Q86UE8 772 aa8.61□□□□□ -1.03
CCDC65-203ENST00000547861 PASD1Q8IV76 773 aa8.61□□□□□ -1.03
CCDC65-203ENST00000547861 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.61□□□□□ -1.03
CCDC65-203ENST00000547861 KLHL7Q8IXQ5 586 aa8.61□□□□□ -1.03
CCDC65-203ENST00000547861 TMEM130Q8N3G9 435 aa8.61□□□□□ -1.03
CCDC65-203ENST00000547861 KRT35Q92764 455 aa8.61□□□□□ -1.03
CCDC65-203ENST00000547861 CD101Q93033 1021 aa8.61□□□□□ -1.03
CCDC65-203ENST00000547861 TRIM11Q96F44 468 aa8.61□□□□□ -1.03
CCDC65-203ENST00000547861 ZFRQ96KR1 1074 aaKnown RBP8.61□□□□□ -1.03
CCDC65-203ENST00000547861 SCLT1Q96NL6 688 aa8.61□□□□□ -1.03
CCDC65-203ENST00000547861 TOX2Q96NM4 488 aa8.61□□□□□ -1.03
CCDC65-203ENST00000547861 HINFPQ9BQA5 517 aa8.61□□□□□ -1.03
CCDC65-203ENST00000547861 AP1M1Q9BXS5 423 aa8.61□□□□□ -1.03
CCDC65-203ENST00000547861 XYLT2Q9H1B5 865 aa8.61□□□□□ -1.03
CCDC65-203ENST00000547861 TTYH1Q9H313 450 aaPredicted RBP8.61□□□□□ -1.03
CCDC65-203ENST00000547861 TTC7AQ9ULT0 858 aaPredicted RBP8.61□□□□□ -1.03
CCDC65-203ENST00000547861 GNEQ9Y223 722 aaKnown RBP8.61□□□□□ -1.03
CCDC65-203ENST00000547861 ALG6Q9Y672 507 aa8.61□□□□□ -1.03
CCDC65-203ENST00000547861 MROH7Q68CQ1 1323 aa8.61□□□□□ -1.03
CCDC65-203ENST00000547861 A6NJR5 290 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 LACTBL1A8MY62 500 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 H3BQF6 201 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 CCDC188H7C350 402 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 GLI1P08151 1106 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 SMIM10L2AP0DMW4 78 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 SMIM10L2BP0DMW5 78 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 MYBL1P10243 752 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 ITGA4P13612 1032 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 CD58P19256 250 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 CTNNA2P26232 953 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 OAS2P29728 719 aaKnown RBP8.6□□□□□ -1.03
CCDC65-203ENST00000547861 CTNNA1P35221 906 aaKnown RBP8.6□□□□□ -1.03
CCDC65-203ENST00000547861 NSFP46459 744 aaKnown RBP8.6□□□□□ -1.03
CCDC65-203ENST00000547861 FAM193AP78312 1265 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 ZNF211Q13398 564 aaPredicted RBP8.6□□□□□ -1.03
CCDC65-203ENST00000547861 SGSM1Q2NKQ1 1148 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 JADE1Q6IE81 842 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 LLGL2Q6P1M3 1020 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 ZNF410Q86VK4 478 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 KIAA0319LQ8IZA0 1049 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 UBL4BQ8N7F7 174 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 C1orf127Q8N9H9 656 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 PPP1R13LQ8WUF5 828 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 CPA5Q8WXQ8 436 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 MYLIPQ8WY64 445 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 KAT2BQ92831 832 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 CYFIP2Q96F07 1278 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 GLT1D1Q96MS3 346 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 RPS6KC1Q96S38 1066 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 C11orf70Q9BRQ4 267 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 DDX47Q9H0S4 455 aaKnown RBP8.6□□□□□ -1.03
CCDC65-203ENST00000547861 PLEKHA4Q9H4M7 779 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 SPC25Q9HBM1 224 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 GDF3Q9NR23 364 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 SETD4Q9NVD3 440 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 SIX4Q9UIU6 781 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 POLIQ9UNA4 740 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 ESYT3A0FGR9 886 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 RRN3P2A6NIE6 340 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 KRIT1O00522 736 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 DYNC1LI2O43237 492 aaPredicted RBP8.6□□□□□ -1.03
CCDC65-203ENST00000547861 SPOPO43791 374 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 ERLIN2O94905 339 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 FGGP02679 453 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 ASGR1P07306 291 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 FGFR4P22455 802 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 RRM1P23921 792 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 GJA9P57773 515 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 GUCY2DQ02846 1103 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 SMC1AQ14683 1233 aaKnown RBP8.6□□□□□ -1.03
CCDC65-203ENST00000547861 GNASQ5JWF2 1037 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 AADACL2Q6P093 401 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 PHF13Q86YI8 300 aaPredicted RBP8.6□□□□□ -1.03
CCDC65-203ENST00000547861 PCSK9Q8NBP7 692 aaKnown RBP8.6□□□□□ -1.03
CCDC65-203ENST00000547861 CASKIN2Q8WXE0 1202 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 COL25A1Q9BXS0 654 aaPredicted RBP8.6□□□□□ -1.03
CCDC65-203ENST00000547861 TRIM7Q9C029 511 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 UPF3AQ9H1J1 476 aaKnown RBP8.6□□□□□ -1.03
CCDC65-203ENST00000547861 WNT8AQ9H1J5 351 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 ADAMTS10Q9H324 1103 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 CISHQ9NSE2 258 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 ANAPC7Q9UJX3 599 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 HPCAL4Q9UM19 191 aa8.6□□□□□ -1.03
CCDC65-203ENST00000547861 CHD9Q3L8U1 2897 aa8.59□□□□□ -1.03
CCDC65-203ENST00000547861 TIMP1P01033 207 aa8.59□□□□□ -1.03
CCDC65-203ENST00000547861 CST5P28325 142 aaPredicted RBP8.59□□□□□ -1.03
CCDC65-203ENST00000547861 RAP1GAPP47736 663 aa8.59□□□□□ -1.03
CCDC65-203ENST00000547861 PEX5P50542 639 aa8.59□□□□□ -1.03
CCDC65-203ENST00000547861 CDK7P50613 346 aa8.59□□□□□ -1.03
CCDC65-203ENST00000547861 YWHAEP62258 255 aaKnown RBP8.59□□□□□ -1.03
CCDC65-203ENST00000547861 POU5F1Q01860 360 aaKnown RBP8.59□□□□□ -1.03
CCDC65-203ENST00000547861 KCNC4Q03721 635 aa8.59□□□□□ -1.03
CCDC65-203ENST00000547861 PTP4A2Q12974 167 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms