RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 UHRF1Q96T88 793 aaPredicted RBP3.28□□□□□ -1.88
DEPDC4-204ENST00000547823 KRTAP2-2Q9BYT5 123 aa3.28□□□□□ -1.88
DEPDC4-204ENST00000547823 KCTD10Q9H3F6 313 aa3.28□□□□□ -1.88
DEPDC4-204ENST00000547823 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.28□□□□□ -1.88
DEPDC4-204ENST00000547823 LANCL2Q9NS86 450 aa3.28□□□□□ -1.88
DEPDC4-204ENST00000547823 USP35Q9P2H5 1018 aa3.28□□□□□ -1.88
DEPDC4-204ENST00000547823 WNK3Q9BYP7 1800 aa3.28□□□□□ -1.88
DEPDC4-204ENST00000547823 ATP7BP35670 1465 aa3.28□□□□□ -1.88
DEPDC4-204ENST00000547823 NRXN1Q9ULB1 1477 aa3.28□□□□□ -1.88
DEPDC4-204ENST00000547823 LRRC37A3O60309 1634 aa3.27□□□□□ -1.89
DEPDC4-204ENST00000547823 PNPLA7Q6ZV29 1317 aa3.27□□□□□ -1.89
DEPDC4-204ENST00000547823 ZNF521Q96K83 1311 aa3.27□□□□□ -1.89
DEPDC4-204ENST00000547823 KPNA6O60684 536 aa3.27□□□□□ -1.89
DEPDC4-204ENST00000547823 MOSPD3O75425 235 aa3.27□□□□□ -1.89
DEPDC4-204ENST00000547823 ASMTLO95671 621 aa3.27□□□□□ -1.89
DEPDC4-204ENST00000547823 PRR35P0CG20 571 aa3.27□□□□□ -1.89
DEPDC4-204ENST00000547823 RAP2AP10114 183 aa3.27□□□□□ -1.89
DEPDC4-204ENST00000547823 SDSP20132 328 aa3.27□□□□□ -1.89
DEPDC4-204ENST00000547823 KELP23276 732 aa3.27□□□□□ -1.89
DEPDC4-204ENST00000547823 MAPK10P53779 464 aa3.27□□□□□ -1.89
DEPDC4-204ENST00000547823 FOXG1P55316 489 aaPredicted RBP3.27□□□□□ -1.89
DEPDC4-204ENST00000547823 EXOSC10Q01780 885 aaKnown RBP3.27□□□□□ -1.89
DEPDC4-204ENST00000547823 PABPC4Q13310 644 aaKnown RBP eCLIP3.27□□□□□ -1.89
DEPDC4-204ENST00000547823 FHL1Q13642 323 aa3.27□□□□□ -1.89
DEPDC4-204ENST00000547823 LAMB3Q13751 1172 aa3.27□□□□□ -1.89
DEPDC4-204ENST00000547823 PTPRRQ15256 657 aa3.27□□□□□ -1.89
DEPDC4-204ENST00000547823 SF3B3Q15393 1217 aaKnown RBP3.27□□□□□ -1.89
DEPDC4-204ENST00000547823 GEN1Q17RS7 908 aa3.27□□□□□ -1.89
DEPDC4-204ENST00000547823 TKFCQ3LXA3 575 aa3.27□□□□□ -1.89
DEPDC4-204ENST00000547823 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
DEPDC4-204ENST00000547823 AFMIDQ63HM1 303 aa3.27□□□□□ -1.89
DEPDC4-204ENST00000547823 AHI1Q8N157 1196 aa3.27□□□□□ -1.89
DEPDC4-204ENST00000547823 PPM1KQ8N3J5 372 aa3.27□□□□□ -1.89
DEPDC4-204ENST00000547823 TCP11L2Q8N4U5 519 aa3.27□□□□□ -1.89
DEPDC4-204ENST00000547823 FITM2Q8N6M3 262 aa3.27□□□□□ -1.89
DEPDC4-204ENST00000547823 SMC1BQ8NDV3 1235 aa3.27□□□□□ -1.89
DEPDC4-204ENST00000547823 DENND1AQ8TEH3 1009 aa3.27□□□□□ -1.89
DEPDC4-204ENST00000547823 FBXL20Q96IG2 436 aa3.27□□□□□ -1.89
DEPDC4-204ENST00000547823 ACAP3Q96P50 834 aa3.27□□□□□ -1.89
DEPDC4-204ENST00000547823 WACQ9BTA9 647 aa3.27□□□□□ -1.89
DEPDC4-204ENST00000547823 PRDM11Q9NQV5 511 aa3.27□□□□□ -1.89
DEPDC4-204ENST00000547823 TMEM140Q9NV12 185 aa3.27□□□□□ -1.89
DEPDC4-204ENST00000547823 INTS13Q9NVM9 706 aa3.27□□□□□ -1.89
DEPDC4-204ENST00000547823 MRPL42Q9Y6G3 142 aaKnown RBP3.27□□□□□ -1.89
DEPDC4-204ENST00000547823 KIF1BO60333 1816 aa3.27□□□□□ -1.89
DEPDC4-204ENST00000547823 DAPK1P53355 1430 aa3.27□□□□□ -1.89
DEPDC4-204ENST00000547823 SSH2Q76I76 1423 aa3.27□□□□□ -1.89
DEPDC4-204ENST00000547823 CLTCL1P53675 1640 aa3.26□□□□□ -1.89
DEPDC4-204ENST00000547823 KIAA0232Q92628 1395 aa3.26□□□□□ -1.89
DEPDC4-204ENST00000547823 ANKRD30AQ9BXX3 1397 aa3.26□□□□□ -1.89
DEPDC4-204ENST00000547823 PHRF1Q9P1Y6 1649 aaKnown RBP3.26□□□□□ -1.89
DEPDC4-204ENST00000547823 AOX1Q06278 1338 aa3.26□□□□□ -1.89
DEPDC4-204ENST00000547823 A0A1W2PS29 197 aa3.26□□□□□ -1.89
DEPDC4-204ENST00000547823 ZNF891A8MT65 544 aaPredicted RBP3.26□□□□□ -1.89
DEPDC4-204ENST00000547823 GSG1L2A8MUP6 293 aa3.26□□□□□ -1.89
DEPDC4-204ENST00000547823 INSIG1O15503 277 aa3.26□□□□□ -1.89
DEPDC4-204ENST00000547823 ADCY6O43306 1168 aa3.26□□□□□ -1.89
DEPDC4-204ENST00000547823 AKR1B10O60218 316 aa3.26□□□□□ -1.89
DEPDC4-204ENST00000547823 TKTP29401 623 aaKnown RBP3.26□□□□□ -1.89
DEPDC4-204ENST00000547823 FXR1P51114 621 aaKnown RBP eCLIP3.26□□□□□ -1.89
DEPDC4-204ENST00000547823 PLCD1P51178 756 aa3.26□□□□□ -1.89
DEPDC4-204ENST00000547823 POLGP54098 1239 aaPredicted RBP3.26□□□□□ -1.89
DEPDC4-204ENST00000547823 LGALS4P56470 323 aa3.26□□□□□ -1.89
DEPDC4-204ENST00000547823 PER3P56645 1201 aa3.26□□□□□ -1.89
DEPDC4-204ENST00000547823 ATP2B3Q16720 1220 aa3.26□□□□□ -1.89
DEPDC4-204ENST00000547823 ZNF626Q68DY1 528 aa3.26□□□□□ -1.89
DEPDC4-204ENST00000547823 SEM1Q6ZVN7 128 aa3.26□□□□□ -1.89
DEPDC4-204ENST00000547823 NEK8Q86SG6 692 aa3.26□□□□□ -1.89
DEPDC4-204ENST00000547823 RASSF3Q86WH2 238 aa3.26□□□□□ -1.89
DEPDC4-204ENST00000547823 HOMER1Q86YM7 354 aa3.26□□□□□ -1.89
DEPDC4-204ENST00000547823 NXPE1Q8N323 547 aa3.26□□□□□ -1.89
DEPDC4-204ENST00000547823 OR2W6PQ8NHA6 318 aa3.26□□□□□ -1.89
DEPDC4-204ENST00000547823 ZNF48Q96MX3 618 aaPredicted RBP3.26□□□□□ -1.89
DEPDC4-204ENST00000547823 SENP6Q9GZR1 1112 aaPredicted RBP3.26□□□□□ -1.89
DEPDC4-204ENST00000547823 BHMT2Q9H2M3 363 aa3.26□□□□□ -1.89
DEPDC4-204ENST00000547823 NMRK2Q9NPI5 230 aa3.26□□□□□ -1.89
DEPDC4-204ENST00000547823 FANCLQ9NW38 375 aa3.26□□□□□ -1.89
DEPDC4-204ENST00000547823 USP25Q9UHP3 1055 aa3.26□□□□□ -1.89
DEPDC4-204ENST00000547823 BTBD3Q9Y2F9 522 aa3.26□□□□□ -1.89
DEPDC4-204ENST00000547823 THRAP3Q9Y2W1 955 aaKnown RBP3.26□□□□□ -1.89
DEPDC4-204ENST00000547823 NOC2LQ9Y3T9 749 aaKnown RBP3.26□□□□□ -1.89
DEPDC4-204ENST00000547823 CD2APQ9Y5K6 639 aa3.26□□□□□ -1.89
DEPDC4-204ENST00000547823 KNDC1Q76NI1 1749 aa3.26□□□□□ -1.89
DEPDC4-204ENST00000547823 CICQ96RK0 1608 aaPredicted RBP3.26□□□□□ -1.89
DEPDC4-204ENST00000547823 BTAF1O14981 1849 aa3.26□□□□□ -1.89
DEPDC4-204ENST00000547823 NHSQ6T4R5 1651 aa3.25□□□□□ -1.89
DEPDC4-204ENST00000547823 LMO7Q8WWI1 1683 aa3.25□□□□□ -1.89
DEPDC4-204ENST00000547823 TP73O15350 636 aa3.25□□□□□ -1.89
DEPDC4-204ENST00000547823 ENDOD1O94919 500 aa3.25□□□□□ -1.89
DEPDC4-204ENST00000547823 CD1AP06126 327 aa3.25□□□□□ -1.89
DEPDC4-204ENST00000547823 GUCY1A2P33402 732 aa3.25□□□□□ -1.89
DEPDC4-204ENST00000547823 EVA1CP58658 441 aa3.25□□□□□ -1.89
DEPDC4-204ENST00000547823 RAPGEF1Q13905 1077 aa3.25□□□□□ -1.89
DEPDC4-204ENST00000547823 UGT8Q16880 541 aa3.25□□□□□ -1.89
DEPDC4-204ENST00000547823 SLC44A4Q53GD3 710 aa3.25□□□□□ -1.89
DEPDC4-204ENST00000547823 ZNF529Q6P280 563 aa3.25□□□□□ -1.89
DEPDC4-204ENST00000547823 C16orf86Q6ZW13 317 aa3.25□□□□□ -1.89
DEPDC4-204ENST00000547823 CLNKQ7Z7G1 428 aa3.25□□□□□ -1.89
DEPDC4-204ENST00000547823 REPS2Q8NFH8 660 aa3.25□□□□□ -1.89
DEPDC4-204ENST00000547823 RIN2Q8WYP3 895 aaPredicted RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms