RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 TMLHEQ9NVH6 421 aa20.08■□□□□ 0.81
PRPF40B-206ENST00000547764 CEP72Q9P209 647 aa20.08■□□□□ 0.81
PRPF40B-206ENST00000547764 LIMD1Q9UGP4 676 aa20.08■□□□□ 0.81
PRPF40B-206ENST00000547764 YIPF1Q9Y548 306 aa20.08■□□□□ 0.81
PRPF40B-206ENST00000547764 ALADP13716 330 aa20.07■□□□□ 0.8
PRPF40B-206ENST00000547764 PTPN2P17706 415 aa20.07■□□□□ 0.8
PRPF40B-206ENST00000547764 WARSP23381 471 aaKnown RBP20.07■□□□□ 0.8
PRPF40B-206ENST00000547764 GCLMP48507 274 aa20.07■□□□□ 0.8
PRPF40B-206ENST00000547764 TNNC1P63316 161 aa20.07■□□□□ 0.8
PRPF40B-206ENST00000547764 PPP3CAQ08209 521 aa20.07■□□□□ 0.8
PRPF40B-206ENST00000547764 SMARCB1Q12824 385 aa20.07■□□□□ 0.8
PRPF40B-206ENST00000547764 ZNF699Q32M78 642 aa20.07■□□□□ 0.8
PRPF40B-206ENST00000547764 INTS6LQ5JSJ4 861 aaKnown RBP20.07■□□□□ 0.8
PRPF40B-206ENST00000547764 TRIML1Q8N9V2 468 aa20.07■□□□□ 0.8
PRPF40B-206ENST00000547764 ELMO3Q96BJ8 720 aa20.07■□□□□ 0.8
PRPF40B-206ENST00000547764 CLSTN2Q9H4D0 955 aa20.07■□□□□ 0.8
PRPF40B-206ENST00000547764 VRTNQ9H8Y1 702 aa20.07■□□□□ 0.8
PRPF40B-206ENST00000547764 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.07■□□□□ 0.8
PRPF40B-206ENST00000547764 HSFX1Q9UBD0 423 aa20.07■□□□□ 0.8
PRPF40B-206ENST00000547764 NXF1Q9UBU9 619 aaKnown RBP20.07■□□□□ 0.8
PRPF40B-206ENST00000547764 NOTCH4Q99466 2003 aa20.07■□□□□ 0.8
PRPF40B-206ENST00000547764 SOAT2O75908 522 aa20.06■□□□□ 0.8
PRPF40B-206ENST00000547764 RHOP08100 348 aa20.06■□□□□ 0.8
PRPF40B-206ENST00000547764 LMO2P25791 158 aa20.06■□□□□ 0.8
PRPF40B-206ENST00000547764 PCSK1P29120 753 aa20.06■□□□□ 0.8
PRPF40B-206ENST00000547764 ELMOD1Q8N336 334 aa20.06■□□□□ 0.8
PRPF40B-206ENST00000547764 ITFG1Q8TB96 612 aa20.06■□□□□ 0.8
PRPF40B-206ENST00000547764 C2orf15Q8WU43 125 aaKnown RBP20.06■□□□□ 0.8
PRPF40B-206ENST00000547764 NELFBQ8WX92 580 aa20.06■□□□□ 0.8
PRPF40B-206ENST00000547764 ZNF512Q96ME7 567 aaPredicted RBP20.06■□□□□ 0.8
PRPF40B-206ENST00000547764 PKMYT1Q99640 499 aa20.06■□□□□ 0.8
PRPF40B-206ENST00000547764 CORO1BQ9BR76 489 aa20.06■□□□□ 0.8
PRPF40B-206ENST00000547764 MRPL45Q9BRJ2 306 aaKnown RBP20.06■□□□□ 0.8
PRPF40B-206ENST00000547764 EPS15L1Q9UBC2 864 aa20.06■□□□□ 0.8
PRPF40B-206ENST00000547764 MYO10Q9HD67 2058 aa20.06■□□□□ 0.8
PRPF40B-206ENST00000547764 SLC16A3O15427 465 aaKnown RBP20.05■□□□□ 0.8
PRPF40B-206ENST00000547764 TACC1O75410 805 aa20.05■□□□□ 0.8
PRPF40B-206ENST00000547764 HLA-DRAP01903 254 aa20.05■□□□□ 0.8
PRPF40B-206ENST00000547764 ASGR2P07307 311 aa20.05■□□□□ 0.8
PRPF40B-206ENST00000547764 FAM163BP0C2L3 166 aa20.05■□□□□ 0.8
PRPF40B-206ENST00000547764 ALDH1A3P47895 512 aa20.05■□□□□ 0.8
PRPF40B-206ENST00000547764 TUFMP49411 452 aaKnown RBP20.05■□□□□ 0.8
PRPF40B-206ENST00000547764 PLD1Q13393 1074 aa20.05■□□□□ 0.8
PRPF40B-206ENST00000547764 SGSM1Q2NKQ1 1148 aa20.05■□□□□ 0.8
PRPF40B-206ENST00000547764 MGAT5BQ3V5L5 792 aa20.05■□□□□ 0.8
PRPF40B-206ENST00000547764 ZNF667Q5HYK9 610 aa20.05■□□□□ 0.8
PRPF40B-206ENST00000547764 IQCEQ6IPM2 695 aa20.05■□□□□ 0.8
PRPF40B-206ENST00000547764 TTI2Q6NXR4 508 aa20.05■□□□□ 0.8
PRPF40B-206ENST00000547764 SPPL2BQ8TCT7 592 aa20.05■□□□□ 0.8
PRPF40B-206ENST00000547764 SEPT5Q99719 369 aaPredicted RBP20.05■□□□□ 0.8
PRPF40B-206ENST00000547764 DUSP9Q99956 384 aaKnown RBP20.05■□□□□ 0.8
PRPF40B-206ENST00000547764 DNAJC25Q9H1X3 360 aa20.05■□□□□ 0.8
PRPF40B-206ENST00000547764 MMRN2Q9H8L6 949 aa20.05■□□□□ 0.8
PRPF40B-206ENST00000547764 AVENQ9NQS1 362 aaPredicted RBP20.05■□□□□ 0.8
PRPF40B-206ENST00000547764 ABI2Q9NYB9 513 aaPredicted RBP20.05■□□□□ 0.8
PRPF40B-206ENST00000547764 GTF3C4Q9UKN8 822 aa20.05■□□□□ 0.8
PRPF40B-206ENST00000547764 CTNND2Q9UQB3 1225 aa20.05■□□□□ 0.8
PRPF40B-206ENST00000547764 PCDHB5Q9Y5E4 795 aa20.05■□□□□ 0.8
PRPF40B-206ENST00000547764 DOCK8Q8NF50 2099 aa20.05■□□□□ 0.8
PRPF40B-206ENST00000547764 ATP2C2O75185 946 aa20.04■□□□□ 0.8
PRPF40B-206ENST00000547764 CLSTN1O94985 981 aa20.04■□□□□ 0.8
PRPF40B-206ENST00000547764 PDGFRBP09619 1106 aa20.04■□□□□ 0.8
PRPF40B-206ENST00000547764 LAMP2P13473 410 aa20.04■□□□□ 0.8
PRPF40B-206ENST00000547764 GTF2H1P32780 548 aa20.04■□□□□ 0.8
PRPF40B-206ENST00000547764 GNL1P36915 607 aaPredicted RBP20.04■□□□□ 0.8
PRPF40B-206ENST00000547764 PIK3CAP42336 1068 aa20.04■□□□□ 0.8
PRPF40B-206ENST00000547764 EPHB3P54753 998 aa20.04■□□□□ 0.8
PRPF40B-206ENST00000547764 NFE2Q16621 373 aaPredicted RBP20.04■□□□□ 0.8
PRPF40B-206ENST00000547764 PTPN21Q16825 1174 aa20.04■□□□□ 0.8
PRPF40B-206ENST00000547764 CCDC142Q17RM4 750 aa20.04■□□□□ 0.8
PRPF40B-206ENST00000547764 SLC5A9Q2M3M2 681 aa20.04■□□□□ 0.8
PRPF40B-206ENST00000547764 HS6ST3Q8IZP7 471 aa20.04■□□□□ 0.8
PRPF40B-206ENST00000547764 OR6B3Q8NGW1 331 aa20.04■□□□□ 0.8
PRPF40B-206ENST00000547764 TAS1R2Q8TE23 839 aa20.04■□□□□ 0.8
PRPF40B-206ENST00000547764 TAF4BQ92750 862 aa20.04■□□□□ 0.8
PRPF40B-206ENST00000547764 FGF13Q92913 245 aa20.04■□□□□ 0.8
PRPF40B-206ENST00000547764 SYT15Q9BQS2 421 aa20.04■□□□□ 0.8
PRPF40B-206ENST00000547764 SNX25Q9H3E2 840 aa20.04■□□□□ 0.8
PRPF40B-206ENST00000547764 TMEM8AQ9HCN3 771 aa20.04■□□□□ 0.8
PRPF40B-206ENST00000547764 CDH9Q9ULB4 789 aa20.04■□□□□ 0.8
PRPF40B-206ENST00000547764 CDH7Q9ULB5 785 aa20.04■□□□□ 0.8
PRPF40B-206ENST00000547764 MRPS23Q9Y3D9 190 aaKnown RBP20.04■□□□□ 0.8
PRPF40B-206ENST00000547764 NME7Q9Y5B8 376 aa20.04■□□□□ 0.8
PRPF40B-206ENST00000547764 BICDL2A1A5D9 508 aa20.03■□□□□ 0.8
PRPF40B-206ENST00000547764 MYBPHLA2RUH7 354 aa20.03■□□□□ 0.8
PRPF40B-206ENST00000547764 ASS1P00966 412 aaKnown RBP20.03■□□□□ 0.8
PRPF40B-206ENST00000547764 HAPLN1P10915 354 aaPredicted RBP20.03■□□□□ 0.8
PRPF40B-206ENST00000547764 STX17P56962 302 aa20.03■□□□□ 0.8
PRPF40B-206ENST00000547764 PSMC1P62191 440 aaKnown RBP20.03■□□□□ 0.8
PRPF40B-206ENST00000547764 PAK1Q13153 545 aa20.03■□□□□ 0.8
PRPF40B-206ENST00000547764 PRSS36Q5K4E3 855 aa20.03■□□□□ 0.8
PRPF40B-206ENST00000547764 KRT39Q6A163 491 aa20.03■□□□□ 0.8
PRPF40B-206ENST00000547764 SPOPLQ6IQ16 392 aa20.03■□□□□ 0.8
PRPF40B-206ENST00000547764 FAM171BQ6P995 826 aa20.03■□□□□ 0.8
PRPF40B-206ENST00000547764 FOXR2Q6PJQ5 311 aa20.03■□□□□ 0.8
PRPF40B-206ENST00000547764 CEP63Q96MT8 703 aa20.03■□□□□ 0.8
PRPF40B-206ENST00000547764 PI4K2AQ9BTU6 479 aa20.03■□□□□ 0.8
PRPF40B-206ENST00000547764 NUP62CLQ9H1M0 184 aa20.03■□□□□ 0.8
PRPF40B-206ENST00000547764 SMYD3Q9H7B4 428 aa20.03■□□□□ 0.8
PRPF40B-206ENST00000547764 CRTAC1Q9NQ79 661 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms