RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 TMLHEQ9NVH6 421 aa12.68□□□□□ -0.38
RAB5C-204ENST00000547517 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.68□□□□□ -0.38
RAB5C-204ENST00000547517 CEP72Q9P209 647 aa12.68□□□□□ -0.38
RAB5C-204ENST00000547517 EPS15L1Q9UBC2 864 aa12.68□□□□□ -0.38
RAB5C-204ENST00000547517 NXF1Q9UBU9 619 aaKnown RBP12.68□□□□□ -0.38
RAB5C-204ENST00000547517 CDH7Q9ULB5 785 aa12.68□□□□□ -0.38
RAB5C-204ENST00000547517 SORCS3Q9UPU3 1222 aa12.68□□□□□ -0.38
RAB5C-204ENST00000547517 MRPS23Q9Y3D9 190 aaKnown RBP12.68□□□□□ -0.38
RAB5C-204ENST00000547517 GABRDO14764 452 aa12.67□□□□□ -0.38
RAB5C-204ENST00000547517 CETN3O15182 167 aa12.67□□□□□ -0.38
RAB5C-204ENST00000547517 VNN1O95497 513 aa12.67□□□□□ -0.38
RAB5C-204ENST00000547517 C4BPAP04003 597 aaKnown RBP12.67□□□□□ -0.38
RAB5C-204ENST00000547517 MYL4P12829 197 aa12.67□□□□□ -0.38
RAB5C-204ENST00000547517 CD44P16070 742 aaKnown RBP12.67□□□□□ -0.38
RAB5C-204ENST00000547517 CEBPBP17676 345 aa12.67□□□□□ -0.38
RAB5C-204ENST00000547517 PTPN2P17706 415 aa12.67□□□□□ -0.38
RAB5C-204ENST00000547517 WARSP23381 471 aaKnown RBP12.67□□□□□ -0.38
RAB5C-204ENST00000547517 PCSK1P29120 753 aa12.67□□□□□ -0.38
RAB5C-204ENST00000547517 ATICP31939 592 aa12.67□□□□□ -0.38
RAB5C-204ENST00000547517 ALDH1A3P47895 512 aa12.67□□□□□ -0.38
RAB5C-204ENST00000547517 LHX1P48742 406 aa12.67□□□□□ -0.38
RAB5C-204ENST00000547517 EPHB3P54753 998 aa12.67□□□□□ -0.38
RAB5C-204ENST00000547517 PSMC1P62191 440 aaKnown RBP12.67□□□□□ -0.38
RAB5C-204ENST00000547517 ZXDAP98168 799 aa12.67□□□□□ -0.38
RAB5C-204ENST00000547517 WDR72Q3MJ13 1102 aa12.67□□□□□ -0.38
RAB5C-204ENST00000547517 ZACNQ401N2 412 aa12.67□□□□□ -0.38
RAB5C-204ENST00000547517 TMEM31Q5JXX7 168 aa12.67□□□□□ -0.38
RAB5C-204ENST00000547517 C1orf220Q5T0J3 134 aa12.67□□□□□ -0.38
RAB5C-204ENST00000547517 ANKRD40Q6AI12 368 aa12.67□□□□□ -0.38
RAB5C-204ENST00000547517 KLHL10Q6JEL2 608 aa12.67□□□□□ -0.38
RAB5C-204ENST00000547517 SCARA5Q6ZMJ2 495 aa12.67□□□□□ -0.38
RAB5C-204ENST00000547517 SV2AQ7L0J3 742 aa12.67□□□□□ -0.38
RAB5C-204ENST00000547517 DPH6Q7L8W6 267 aa12.67□□□□□ -0.38
RAB5C-204ENST00000547517 NPAS3Q8IXF0 933 aa12.67□□□□□ -0.38
RAB5C-204ENST00000547517 HS6ST3Q8IZP7 471 aa12.67□□□□□ -0.38
RAB5C-204ENST00000547517 FAM200AQ8TCP9 573 aa12.67□□□□□ -0.38
RAB5C-204ENST00000547517 SPPL2BQ8TCT7 592 aa12.67□□□□□ -0.38
RAB5C-204ENST00000547517 C2orf15Q8WU43 125 aaKnown RBP12.67□□□□□ -0.38
RAB5C-204ENST00000547517 RSAD2Q8WXG1 361 aa12.67□□□□□ -0.38
RAB5C-204ENST00000547517 ZNF512Q96ME7 567 aaPredicted RBP12.67□□□□□ -0.38
RAB5C-204ENST00000547517 IPO9Q96P70 1041 aaKnown RBP12.67□□□□□ -0.38
RAB5C-204ENST00000547517 ACBD6Q9BR61 282 aa12.67□□□□□ -0.38
RAB5C-204ENST00000547517 MRPL45Q9BRJ2 306 aaKnown RBP12.67□□□□□ -0.38
RAB5C-204ENST00000547517 XYLT2Q9H1B5 865 aa12.67□□□□□ -0.38
RAB5C-204ENST00000547517 DNAJC25Q9H1X3 360 aa12.67□□□□□ -0.38
RAB5C-204ENST00000547517 ASAH2Q9NR71 780 aa12.67□□□□□ -0.38
RAB5C-204ENST00000547517 CTNND2Q9UQB3 1225 aa12.67□□□□□ -0.38
RAB5C-204ENST00000547517 PCDHB5Q9Y5E4 795 aa12.67□□□□□ -0.38
RAB5C-204ENST00000547517 DOCK6Q96HP0 2047 aa12.67□□□□□ -0.38
RAB5C-204ENST00000547517 DOCK8Q8NF50 2099 aa12.66□□□□□ -0.38
RAB5C-204ENST00000547517 STAU1O95793 577 aaKnown RBP12.66□□□□□ -0.38
RAB5C-204ENST00000547517 LAMP2P13473 410 aa12.66□□□□□ -0.38
RAB5C-204ENST00000547517 ATF6P18850 670 aa12.66□□□□□ -0.38
RAB5C-204ENST00000547517 BMP6P22004 513 aa12.66□□□□□ -0.38
RAB5C-204ENST00000547517 CCR2P41597 374 aa12.66□□□□□ -0.38
RAB5C-204ENST00000547517 RAP1GAPP47736 663 aa12.66□□□□□ -0.38
RAB5C-204ENST00000547517 GCLMP48507 274 aa12.66□□□□□ -0.38
RAB5C-204ENST00000547517 LRRC63Q05C16 580 aa12.66□□□□□ -0.38
RAB5C-204ENST00000547517 SMARCB1Q12824 385 aa12.66□□□□□ -0.38
RAB5C-204ENST00000547517 MORC3Q14149 939 aa12.66□□□□□ -0.38
RAB5C-204ENST00000547517 VEPH1Q14D04 833 aa12.66□□□□□ -0.38
RAB5C-204ENST00000547517 NFE2Q16621 373 aaPredicted RBP12.66□□□□□ -0.38
RAB5C-204ENST00000547517 DCAF17Q5H9S7 520 aaPredicted RBP12.66□□□□□ -0.38
RAB5C-204ENST00000547517 ZNF667Q5HYK9 610 aa12.66□□□□□ -0.38
RAB5C-204ENST00000547517 PRSS36Q5K4E3 855 aa12.66□□□□□ -0.38
RAB5C-204ENST00000547517 CYP4A22Q5TCH4 519 aa12.66□□□□□ -0.38
RAB5C-204ENST00000547517 LIMS2Q7Z4I7 341 aa12.66□□□□□ -0.38
RAB5C-204ENST00000547517 EDAQ92838 391 aa12.66□□□□□ -0.38
RAB5C-204ENST00000547517 TCEAL4Q96EI5 215 aa12.66□□□□□ -0.38
RAB5C-204ENST00000547517 PKMYT1Q99640 499 aa12.66□□□□□ -0.38
RAB5C-204ENST00000547517 LPIN3Q9BQK8 851 aa12.66□□□□□ -0.38
RAB5C-204ENST00000547517 SYT15Q9BQS2 421 aa12.66□□□□□ -0.38
RAB5C-204ENST00000547517 PI4K2AQ9BTU6 479 aa12.66□□□□□ -0.38
RAB5C-204ENST00000547517 MKNK1Q9BUB5 465 aa12.66□□□□□ -0.38
RAB5C-204ENST00000547517 SNX25Q9H3E2 840 aa12.66□□□□□ -0.38
RAB5C-204ENST00000547517 SMYD3Q9H7B4 428 aa12.66□□□□□ -0.38
RAB5C-204ENST00000547517 KCNK12Q9HB15 430 aa12.66□□□□□ -0.38
RAB5C-204ENST00000547517 AVENQ9NQS1 362 aaPredicted RBP12.66□□□□□ -0.38
RAB5C-204ENST00000547517 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.66□□□□□ -0.388e-7■■■■■ 104
RAB5C-204ENST00000547517 HSFX1Q9UBD0 423 aa12.66□□□□□ -0.38
RAB5C-204ENST00000547517 GTF3C4Q9UKN8 822 aa12.66□□□□□ -0.38
RAB5C-204ENST00000547517 NOTCH4Q99466 2003 aa12.66□□□□□ -0.38
RAB5C-204ENST00000547517 NRG2O14511 850 aaPredicted RBP12.65□□□□□ -0.38
RAB5C-204ENST00000547517 IKBKBO14920 756 aa12.65□□□□□ -0.38
RAB5C-204ENST00000547517 SLC16A3O15427 465 aaKnown RBP12.65□□□□□ -0.38
RAB5C-204ENST00000547517 ATP2C2O75185 946 aa12.65□□□□□ -0.38
RAB5C-204ENST00000547517 TACC1O75410 805 aa12.65□□□□□ -0.38
RAB5C-204ENST00000547517 HLA-DRAP01903 254 aa12.65□□□□□ -0.38
RAB5C-204ENST00000547517 PDGFRBP09619 1106 aa12.65□□□□□ -0.38
RAB5C-204ENST00000547517 HAPLN1P10915 354 aaPredicted RBP12.65□□□□□ -0.38
RAB5C-204ENST00000547517 GJA1P17302 382 aa12.65□□□□□ -0.38
RAB5C-204ENST00000547517 CCNE1P24864 410 aa12.65□□□□□ -0.38
RAB5C-204ENST00000547517 LMO2P25791 158 aa12.65□□□□□ -0.38
RAB5C-204ENST00000547517 PPP1R2P41236 205 aa12.65□□□□□ -0.38
RAB5C-204ENST00000547517 TUFMP49411 452 aaKnown RBP12.65□□□□□ -0.38
RAB5C-204ENST00000547517 GPR15P49685 360 aa12.65□□□□□ -0.38
RAB5C-204ENST00000547517 FKBP3Q00688 224 aaKnown RBP12.65□□□□□ -0.38
RAB5C-204ENST00000547517 PPP3CAQ08209 521 aa12.65□□□□□ -0.38
RAB5C-204ENST00000547517 HTR4Q13639 388 aa12.65□□□□□ -0.38
RAB5C-204ENST00000547517 SPOPLQ6IQ16 392 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms