RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 LIN9Q5TKA1 542 aa14.71□□□□□ -0.05
PTCH1-213ENST00000546820 SCARA5Q6ZMJ2 495 aa14.71□□□□□ -0.05
PTCH1-213ENST00000546820 CCDC149Q6ZUS6 474 aa14.71□□□□□ -0.05
PTCH1-213ENST00000546820 LUZP1Q86V48 1076 aa14.71□□□□□ -0.05
PTCH1-213ENST00000546820 UNC93AQ86WB7 457 aa14.71□□□□□ -0.05
PTCH1-213ENST00000546820 KREMEN2Q8NCW0 462 aa14.71□□□□□ -0.05
PTCH1-213ENST00000546820 C2orf15Q8WU43 125 aaKnown RBP14.71□□□□□ -0.05
PTCH1-213ENST00000546820 KBTBD7Q8WVZ9 684 aa14.71□□□□□ -0.05
PTCH1-213ENST00000546820 TATDN2Q93075 761 aa14.71□□□□□ -0.05
PTCH1-213ENST00000546820 TNIP3Q96KP6 325 aa14.71□□□□□ -0.05
PTCH1-213ENST00000546820 MRPL45Q9BRJ2 306 aaKnown RBP14.71□□□□□ -0.05
PTCH1-213ENST00000546820 CRACR2AQ9BSW2 395 aa14.71□□□□□ -0.05
PTCH1-213ENST00000546820 INTS2Q9H0H0 1204 aaKnown RBP14.71□□□□□ -0.05
PTCH1-213ENST00000546820 ZCWPW1Q9H0M4 648 aa14.71□□□□□ -0.05
PTCH1-213ENST00000546820 SMYD3Q9H7B4 428 aa14.71□□□□□ -0.05
PTCH1-213ENST00000546820 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.7□□□□□ -0.06
PTCH1-213ENST00000546820 SPATA31D3P0C874 917 aa14.7□□□□□ -0.06
PTCH1-213ENST00000546820 EPCAMP16422 314 aa14.7□□□□□ -0.06
PTCH1-213ENST00000546820 LMO2P25791 158 aa14.7□□□□□ -0.06
PTCH1-213ENST00000546820 ASPAP45381 313 aa14.7□□□□□ -0.06
PTCH1-213ENST00000546820 CUL2Q13617 745 aa14.7□□□□□ -0.06
PTCH1-213ENST00000546820 KCNC3Q14003 757 aa14.7□□□□□ -0.06
PTCH1-213ENST00000546820 COL19A1Q14993 1142 aa14.7□□□□□ -0.06
PTCH1-213ENST00000546820 SPATA31D4Q6ZUB0 917 aa14.7□□□□□ -0.06
PTCH1-213ENST00000546820 ENOSF1Q7L5Y1 443 aa14.7□□□□□ -0.06
PTCH1-213ENST00000546820 OSTM1Q86WC4 334 aa14.7□□□□□ -0.06
PTCH1-213ENST00000546820 PPM1KQ8N3J5 372 aa14.7□□□□□ -0.06
PTCH1-213ENST00000546820 OR10T2Q8NGX3 314 aa14.7□□□□□ -0.06
PTCH1-213ENST00000546820 LMO3Q8TAP4 145 aa14.7□□□□□ -0.06
PTCH1-213ENST00000546820 JAKMIP2Q96AA8 810 aa14.7□□□□□ -0.06
PTCH1-213ENST00000546820 ELMO3Q96BJ8 720 aa14.7□□□□□ -0.06
PTCH1-213ENST00000546820 RTP3Q9BQQ7 232 aa14.7□□□□□ -0.06
PTCH1-213ENST00000546820 SYT15Q9BQS2 421 aa14.7□□□□□ -0.06
PTCH1-213ENST00000546820 BARX2Q9UMQ3 279 aaPredicted RBP14.7□□□□□ -0.06
PTCH1-213ENST00000546820 WDR27A2RRH5 827 aa14.69□□□□□ -0.06
PTCH1-213ENST00000546820 PRRG1O14668 218 aa14.69□□□□□ -0.06
PTCH1-213ENST00000546820 LINC01565O15544 149 aa14.69□□□□□ -0.06
PTCH1-213ENST00000546820 LRRN2O75325 713 aa14.69□□□□□ -0.06
PTCH1-213ENST00000546820 SERPINC1P01008 464 aa14.69□□□□□ -0.06
PTCH1-213ENST00000546820 PTPN1P18031 435 aaKnown RBP14.69□□□□□ -0.06
PTCH1-213ENST00000546820 SLC9A1P19634 815 aa14.69□□□□□ -0.06
PTCH1-213ENST00000546820 ACAT1P24752 427 aaKnown RBP14.69□□□□□ -0.06
PTCH1-213ENST00000546820 PON1P27169 355 aa14.69□□□□□ -0.06
PTCH1-213ENST00000546820 RAP1GAPP47736 663 aa14.69□□□□□ -0.06
PTCH1-213ENST00000546820 TUFMP49411 452 aaKnown RBP14.69□□□□□ -0.06
PTCH1-213ENST00000546820 NDST1P52848 882 aa14.69□□□□□ -0.06
PTCH1-213ENST00000546820 MFAP3P55082 362 aa14.69□□□□□ -0.06
PTCH1-213ENST00000546820 GCNT1Q02742 428 aa14.69□□□□□ -0.06
PTCH1-213ENST00000546820 ADCY1Q08828 1119 aa14.69□□□□□ -0.06
PTCH1-213ENST00000546820 SLC39A12Q504Y0 691 aa14.69□□□□□ -0.06
PTCH1-213ENST00000546820 INTS6LQ5JSJ4 861 aaKnown RBP14.69□□□□□ -0.06
PTCH1-213ENST00000546820 ANKRD54Q6NXT1 300 aa14.69□□□□□ -0.06
PTCH1-213ENST00000546820 RNF19BQ6ZMZ0 732 aa14.69□□□□□ -0.06
PTCH1-213ENST00000546820 C4orf50Q6ZRC1 276 aa14.69□□□□□ -0.06
PTCH1-213ENST00000546820 SPPL2BQ8TCT7 592 aa14.69□□□□□ -0.06
PTCH1-213ENST00000546820 NT5C1AQ9BXI3 368 aa14.69□□□□□ -0.06
PTCH1-213ENST00000546820 HSD3B7Q9H2F3 369 aa14.69□□□□□ -0.06
PTCH1-213ENST00000546820 UBE2ZQ9H832 354 aaPredicted RBP14.69□□□□□ -0.06
PTCH1-213ENST00000546820 CYP4F11Q9HBI6 524 aa14.69□□□□□ -0.06
PTCH1-213ENST00000546820 UBE2TQ9NPD8 197 aaPredicted RBP14.69□□□□□ -0.06
PTCH1-213ENST00000546820 MAN1C1Q9NR34 630 aa14.69□□□□□ -0.06
PTCH1-213ENST00000546820 HSFX1Q9UBD0 423 aa14.69□□□□□ -0.06
PTCH1-213ENST00000546820 GTF3C4Q9UKN8 822 aa14.69□□□□□ -0.06
PTCH1-213ENST00000546820 PCDHB5Q9Y5E4 795 aa14.69□□□□□ -0.06
PTCH1-213ENST00000546820 OR4Q2P0C623 313 aa14.68□□□□□ -0.06
PTCH1-213ENST00000546820 ATP1A3P13637 1013 aa14.68□□□□□ -0.06
PTCH1-213ENST00000546820 CD58P19256 250 aa14.68□□□□□ -0.06
PTCH1-213ENST00000546820 UBXN1Q04323 297 aa14.68□□□□□ -0.06
PTCH1-213ENST00000546820 INCA1Q0VD86 236 aa14.68□□□□□ -0.06
PTCH1-213ENST00000546820 PPM1LQ5SGD2 360 aa14.68□□□□□ -0.06
PTCH1-213ENST00000546820 SMYD5Q6GMV2 418 aa14.68□□□□□ -0.06
PTCH1-213ENST00000546820 CES5AQ6NT32 575 aa14.68□□□□□ -0.06
PTCH1-213ENST00000546820 FAM171BQ6P995 826 aa14.68□□□□□ -0.06
PTCH1-213ENST00000546820 TRIM65Q6PJ69 517 aa14.68□□□□□ -0.06
PTCH1-213ENST00000546820 CYP26C1Q6V0L0 522 aa14.68□□□□□ -0.06
PTCH1-213ENST00000546820 LRRTM3Q86VH5 581 aa14.68□□□□□ -0.06
PTCH1-213ENST00000546820 SPATA2LQ8IUW3 424 aaPredicted RBP14.68□□□□□ -0.06
PTCH1-213ENST00000546820 TCEAL8Q8IYN2 117 aa14.68□□□□□ -0.06
PTCH1-213ENST00000546820 CRYBG2Q8N1P7 616 aa14.68□□□□□ -0.06
PTCH1-213ENST00000546820 MYCBPAPQ8TBZ2 947 aa14.68□□□□□ -0.06
PTCH1-213ENST00000546820 PCMTD1Q96MG8 357 aaPredicted RBP14.68□□□□□ -0.06
PTCH1-213ENST00000546820 TMEM209Q96SK2 561 aa14.68□□□□□ -0.06
PTCH1-213ENST00000546820 SDCBP2Q9H190 292 aa14.68□□□□□ -0.06
PTCH1-213ENST00000546820 CISHQ9NSE2 258 aa14.68□□□□□ -0.06
PTCH1-213ENST00000546820 ZDHHC7Q9NXF8 308 aa14.68□□□□□ -0.06
PTCH1-213ENST00000546820 FBXW11Q9UKB1 542 aa14.68□□□□□ -0.06
PTCH1-213ENST00000546820 ATG2AQ2TAZ0 1938 aa14.67□□□□□ -0.06
PTCH1-213ENST00000546820 MYBPHLA2RUH7 354 aa14.67□□□□□ -0.06
PTCH1-213ENST00000546820 MTMR11A4FU01 709 aa14.67□□□□□ -0.06
PTCH1-213ENST00000546820 LGALS16A8MUM7 142 aa14.67□□□□□ -0.06
PTCH1-213ENST00000546820 CILPO75339 1184 aa14.67□□□□□ -0.06
PTCH1-213ENST00000546820 ZMYND10O75800 440 aa14.67□□□□□ -0.06
PTCH1-213ENST00000546820 GLP2RO95838 553 aa14.67□□□□□ -0.06
PTCH1-213ENST00000546820 C8AP07357 584 aa14.67□□□□□ -0.06
PTCH1-213ENST00000546820 HNRNPA1P09651 372 aaKnown RBP eCLIP14.67□□□□□ -0.06
PTCH1-213ENST00000546820 KCNA5P22460 613 aa14.67□□□□□ -0.06
PTCH1-213ENST00000546820 ALDH1A3P47895 512 aa14.67□□□□□ -0.06
PTCH1-213ENST00000546820 ITIH3Q06033 890 aa14.67□□□□□ -0.06
PTCH1-213ENST00000546820 DUSP4Q13115 394 aa14.67□□□□□ -0.06
PTCH1-213ENST00000546820 PLD1Q13393 1074 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms