RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 RAB44Q7Z6P3 723 aaPredicted RBP10.06□□□□□ -0.8
SSH1-205ENST00000546812 USP37Q86T82 979 aa10.06□□□□□ -0.8
SSH1-205ENST00000546812 RASSF3Q86WH2 238 aa10.06□□□□□ -0.8
SSH1-205ENST00000546812 HSCBQ8IWL3 235 aa10.06□□□□□ -0.8
SSH1-205ENST00000546812 TTC9BQ8N6N2 239 aa10.06□□□□□ -0.8
SSH1-205ENST00000546812 CCDC26Q8TAB7 109 aa10.06□□□□□ -0.8
SSH1-205ENST00000546812 EZH1Q92800 747 aaPredicted RBP10.06□□□□□ -0.8
SSH1-205ENST00000546812 USP13Q92995 863 aaPredicted RBP10.06□□□□□ -0.8
SSH1-205ENST00000546812 BBC3Q96PG8 261 aaPredicted RBP10.06□□□□□ -0.8
SSH1-205ENST00000546812 GCNAQ96QF7 691 aa10.06□□□□□ -0.8
SSH1-205ENST00000546812 MTMR9Q96QG7 549 aa10.06□□□□□ -0.8
SSH1-205ENST00000546812 NUSAP1Q9BXS6 441 aaKnown RBP10.06□□□□□ -0.8
SSH1-205ENST00000546812 TPSD1Q9BZJ3 242 aa10.06□□□□□ -0.8
SSH1-205ENST00000546812 GJB4Q9NTQ9 266 aa10.06□□□□□ -0.8
SSH1-205ENST00000546812 CCL26Q9Y258 94 aa10.06□□□□□ -0.8
SSH1-205ENST00000546812 KALRNO60229 2985 aa10.06□□□□□ -0.8
SSH1-205ENST00000546812 ABCA7Q8IZY2 2146 aa10.06□□□□□ -0.8
SSH1-205ENST00000546812 ARID2Q68CP9 1835 aa10.05□□□□□ -0.8
SSH1-205ENST00000546812 EIF4E1BA6NMX2 242 aaKnown RBP10.05□□□□□ -0.8
SSH1-205ENST00000546812 K7ELQ4 463 aaPredicted RBP10.05□□□□□ -0.8
SSH1-205ENST00000546812 TNFRSF10BO14763 440 aa10.05□□□□□ -0.8
SSH1-205ENST00000546812 NEMFO60524 1076 aa10.05□□□□□ -0.8
SSH1-205ENST00000546812 MED24O75448 989 aa10.05□□□□□ -0.8
SSH1-205ENST00000546812 ENGP17813 658 aa10.05□□□□□ -0.8
SSH1-205ENST00000546812 PROZP22891 400 aa10.05□□□□□ -0.8
SSH1-205ENST00000546812 U2AF2P26368 475 aaKnown RBP eCLIP10.05□□□□□ -0.8
SSH1-205ENST00000546812 GJA4P35212 333 aa10.05□□□□□ -0.8
SSH1-205ENST00000546812 AVPR1AP37288 418 aa10.05□□□□□ -0.8
SSH1-205ENST00000546812 TUFMP49411 452 aaKnown RBP10.05□□□□□ -0.8
SSH1-205ENST00000546812 AARSP49588 968 aaKnown RBP eCLIP10.05□□□□□ -0.8
SSH1-205ENST00000546812 NR5A1Q13285 461 aa10.05□□□□□ -0.8
SSH1-205ENST00000546812 VEPH1Q14D04 833 aa10.05□□□□□ -0.8
SSH1-205ENST00000546812 PDGFRLQ15198 375 aa10.05□□□□□ -0.8
SSH1-205ENST00000546812 ZNF423Q2M1K9 1284 aa10.05□□□□□ -0.8
SSH1-205ENST00000546812 CC2D1AQ6P1N0 951 aaPredicted RBP10.05□□□□□ -0.8
SSH1-205ENST00000546812 SYT12Q8IV01 421 aa10.05□□□□□ -0.8
SSH1-205ENST00000546812 KIFAP3Q92845 792 aa10.05□□□□□ -0.8
SSH1-205ENST00000546812 SNX21Q969T3 373 aa10.05□□□□□ -0.8
SSH1-205ENST00000546812 CNOT6LQ96LI5 555 aaKnown RBP10.05□□□□□ -0.8
SSH1-205ENST00000546812 LPIN3Q9BQK8 851 aa10.05□□□□□ -0.8
SSH1-205ENST00000546812 TCHPQ9BT92 498 aa10.05□□□□□ -0.8
SSH1-205ENST00000546812 MRPL4Q9BYD3 311 aaKnown RBP10.05□□□□□ -0.8
SSH1-205ENST00000546812 POLD4Q9HCU8 107 aa10.05□□□□□ -0.8
SSH1-205ENST00000546812 TDP1Q9NUW8 608 aa10.05□□□□□ -0.8
SSH1-205ENST00000546812 ORC3Q9UBD5 711 aaPredicted RBP10.05□□□□□ -0.8
SSH1-205ENST00000546812 TUBGCP4Q9UGJ1 667 aa10.05□□□□□ -0.8
SSH1-205ENST00000546812 ACACAQ13085 2346 aa10.05□□□□□ -0.8
SSH1-205ENST00000546812 PDCD11Q14690 1871 aaKnown RBP10.04□□□□□ -0.8
SSH1-205ENST00000546812 APC2O95996 2303 aa10.04□□□□□ -0.8
SSH1-205ENST00000546812 ABLIM1O14639 778 aa10.04□□□□□ -0.8
SSH1-205ENST00000546812 FDPSP14324 419 aaKnown RBP10.04□□□□□ -0.8
SSH1-205ENST00000546812 LRPAP1P30533 357 aa10.04□□□□□ -0.8
SSH1-205ENST00000546812 FAM193AP78312 1265 aa10.04□□□□□ -0.8
SSH1-205ENST00000546812 BFSP1Q12934 665 aa10.04□□□□□ -0.8
SSH1-205ENST00000546812 PSMD2Q13200 908 aa10.04□□□□□ -0.8
SSH1-205ENST00000546812 SLC10A6Q3KNW5 377 aa10.04□□□□□ -0.8
SSH1-205ENST00000546812 OVOS1Q6IE37 1185 aa10.04□□□□□ -0.8
SSH1-205ENST00000546812 ANO7Q6IWH7 933 aa10.04□□□□□ -0.8
SSH1-205ENST00000546812 ARMCX5Q6P1M9 558 aa10.04□□□□□ -0.8
SSH1-205ENST00000546812 SLC23A3Q6PIS1 610 aa10.04□□□□□ -0.8
SSH1-205ENST00000546812 LPCAT2Q7L5N7 544 aa10.04□□□□□ -0.8
SSH1-205ENST00000546812 HDDC3Q8N4P3 179 aa10.04□□□□□ -0.8
SSH1-205ENST00000546812 CPA6Q8N4T0 437 aa10.04□□□□□ -0.8
SSH1-205ENST00000546812 GLIS3Q8NEA6 775 aa10.04□□□□□ -0.8
SSH1-205ENST00000546812 OLIG1Q8TAK6 271 aa10.04□□□□□ -0.8
SSH1-205ENST00000546812 CD101Q93033 1021 aa10.04□□□□□ -0.8
SSH1-205ENST00000546812 TNFRSF25Q93038 417 aa10.04□□□□□ -0.8
SSH1-205ENST00000546812 LLPHQ9BRT6 129 aaKnown RBP10.04□□□□□ -0.8
SSH1-205ENST00000546812 TARS2Q9BW92 718 aaKnown RBP10.04□□□□□ -0.8
SSH1-205ENST00000546812 CCDC86Q9H6F5 360 aaKnown RBP10.04□□□□□ -0.8
SSH1-205ENST00000546812 TMEM134Q9H6X4 195 aa10.04□□□□□ -0.8
SSH1-205ENST00000546812 ECT2Q9H8V3 914 aa10.04□□□□□ -0.8
SSH1-205ENST00000546812 KIF9Q9HAQ2 790 aa10.04□□□□□ -0.8
SSH1-205ENST00000546812 TMEM74BQ9NUR3 256 aa10.04□□□□□ -0.8
SSH1-205ENST00000546812 PHLPP2Q6ZVD8 1323 aa10.04□□□□□ -0.8
SSH1-205ENST00000546812 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.03□□□□□ -0.8
SSH1-205ENST00000546812 CCDC169A6NNP5 214 aa10.03□□□□□ -0.8
SSH1-205ENST00000546812 ATF6P18850 670 aa10.03□□□□□ -0.8
SSH1-205ENST00000546812 TYMPP19971 482 aa10.03□□□□□ -0.8
SSH1-205ENST00000546812 DDX6P26196 483 aaKnown RBP eCLIP10.03□□□□□ -0.8
SSH1-205ENST00000546812 RPA1P27694 616 aa10.03□□□□□ -0.8
SSH1-205ENST00000546812 DPP6P42658 865 aa10.03□□□□□ -0.8
SSH1-205ENST00000546812 PTGER3P43115 390 aa10.03□□□□□ -0.8
SSH1-205ENST00000546812 NPTX2P47972 431 aa10.03□□□□□ -0.8
SSH1-205ENST00000546812 CUL4AQ13619 759 aa10.03□□□□□ -0.8
SSH1-205ENST00000546812 HNRNPDQ14103 355 aaKnown RBP10.03□□□□□ -0.8
SSH1-205ENST00000546812 ZNF268Q14587 947 aaPredicted RBP10.03□□□□□ -0.8
SSH1-205ENST00000546812 TAF12Q16514 161 aa10.03□□□□□ -0.8
SSH1-205ENST00000546812 SPDYCQ5MJ68 293 aa10.03□□□□□ -0.8
SSH1-205ENST00000546812 MPZL3Q6UWV2 235 aa10.03□□□□□ -0.8
SSH1-205ENST00000546812 DSTYKQ6XUX3 929 aa10.03□□□□□ -0.8
SSH1-205ENST00000546812 TAS1R3Q7RTX0 852 aa10.03□□□□□ -0.8
SSH1-205ENST00000546812 TMEM150AQ86TG1 271 aa10.03□□□□□ -0.8
SSH1-205ENST00000546812 TMEFF1Q8IYR6 380 aa10.03□□□□□ -0.8
SSH1-205ENST00000546812 TMEM130Q8N3G9 435 aa10.03□□□□□ -0.8
SSH1-205ENST00000546812 MAB21L3Q8N8X9 362 aa10.03□□□□□ -0.8
SSH1-205ENST00000546812 MDGA1Q8NFP4 955 aa10.03□□□□□ -0.8
SSH1-205ENST00000546812 RIN3Q8TB24 985 aa10.03□□□□□ -0.8
SSH1-205ENST00000546812 ADAM32Q8TC27 787 aa10.03□□□□□ -0.8
SSH1-205ENST00000546812 USP33Q8TEY7 942 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms