RNA–Protein interactions for RNA: ENST00000546537.6

TMEM116-203, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-203ENST00000546537 PDGFRLQ15198 375 aa11.77□□□□□ -0.53
TMEM116-203ENST00000546537 TRIP6Q15654 476 aaKnown RBP11.77□□□□□ -0.53
TMEM116-203ENST00000546537 SPDYCQ5MJ68 293 aa11.77□□□□□ -0.53
TMEM116-203ENST00000546537 PIK3AP1Q6ZUJ8 805 aa11.77□□□□□ -0.53
TMEM116-203ENST00000546537 ARMCX6Q7L4S7 300 aa11.77□□□□□ -0.53
TMEM116-203ENST00000546537 TMEFF1Q8IYR6 380 aa11.77□□□□□ -0.53
TMEM116-203ENST00000546537 CCDC26Q8TAB7 109 aa11.77□□□□□ -0.53
TMEM116-203ENST00000546537 RIN3Q8TB24 985 aa11.77□□□□□ -0.53
TMEM116-203ENST00000546537 USP33Q8TEY7 942 aa11.77□□□□□ -0.53
TMEM116-203ENST00000546537 USP13Q92995 863 aaPredicted RBP11.77□□□□□ -0.53
TMEM116-203ENST00000546537 GCNAQ96QF7 691 aa11.77□□□□□ -0.53
TMEM116-203ENST00000546537 UBL7Q96S82 380 aaPredicted RBP11.77□□□□□ -0.53
TMEM116-203ENST00000546537 KIFC3Q9BVG8 833 aa11.77□□□□□ -0.53
TMEM116-203ENST00000546537 GTPBP2Q9BX10 602 aaKnown RBP11.77□□□□□ -0.53
TMEM116-203ENST00000546537 CDT1Q9H211 546 aa11.77□□□□□ -0.53
TMEM116-203ENST00000546537 ECT2Q9H8V3 914 aa11.77□□□□□ -0.53
TMEM116-203ENST00000546537 KIF9Q9HAQ2 790 aa11.77□□□□□ -0.53
TMEM116-203ENST00000546537 PTPRHQ9HD43 1115 aa11.77□□□□□ -0.53
TMEM116-203ENST00000546537 FSCN3Q9NQT6 498 aa11.77□□□□□ -0.53
TMEM116-203ENST00000546537 TDP1Q9NUW8 608 aa11.77□□□□□ -0.53
TMEM116-203ENST00000546537 DKK4Q9UBT3 224 aa11.77□□□□□ -0.53
TMEM116-203ENST00000546537 SLC6A14Q9UN76 642 aa11.77□□□□□ -0.53
TMEM116-203ENST00000546537 KCNJ14Q9UNX9 436 aa11.77□□□□□ -0.53
TMEM116-203ENST00000546537 TIMM13Q9Y5L4 95 aaPredicted RBP11.77□□□□□ -0.53
TMEM116-203ENST00000546537 ATXN2Q99700 1313 aaKnown RBP11.77□□□□□ -0.53
TMEM116-203ENST00000546537 TSC2P49815 1807 aa11.76□□□□□ -0.53
TMEM116-203ENST00000546537 ANK1P16157 1881 aa11.76□□□□□ -0.53
TMEM116-203ENST00000546537 TK2O00142 265 aa11.76□□□□□ -0.53
TMEM116-203ENST00000546537 LARGE1O95461 756 aa11.76□□□□□ -0.53
TMEM116-203ENST00000546537 CFIP05156 583 aa11.76□□□□□ -0.53
TMEM116-203ENST00000546537 FTH1P19P0C7X4 201 aa11.76□□□□□ -0.53
TMEM116-203ENST00000546537 SPATA31C1P0DKV0 1188 aa11.76□□□□□ -0.53
TMEM116-203ENST00000546537 PLA2G2AP14555 144 aa11.76□□□□□ -0.53
TMEM116-203ENST00000546537 BFSP1Q12934 665 aa11.76□□□□□ -0.53
TMEM116-203ENST00000546537 MYBPC2Q14324 1141 aa11.76□□□□□ -0.53
TMEM116-203ENST00000546537 CRY1Q16526 586 aa11.76□□□□□ -0.53
TMEM116-203ENST00000546537 ZNF568Q3ZCX4 644 aa11.76□□□□□ -0.53
TMEM116-203ENST00000546537 LYSMD4Q5XG99 296 aa11.76□□□□□ -0.53
TMEM116-203ENST00000546537 CC2D1AQ6P1N0 951 aaPredicted RBP11.76□□□□□ -0.53
TMEM116-203ENST00000546537 CPA6Q8N4T0 437 aa11.76□□□□□ -0.53
TMEM116-203ENST00000546537 MINDY1Q8N5J2 469 aa11.76□□□□□ -0.53
TMEM116-203ENST00000546537 FRMD1Q8N878 549 aa11.76□□□□□ -0.53
TMEM116-203ENST00000546537 CEP76Q8TAP6 659 aa11.76□□□□□ -0.53
TMEM116-203ENST00000546537 RLN3Q8WXF3 142 aa11.76□□□□□ -0.53
TMEM116-203ENST00000546537 ACAP3Q96P50 834 aa11.76□□□□□ -0.53
TMEM116-203ENST00000546537 NACC1Q96RE7 527 aa11.76□□□□□ -0.53
TMEM116-203ENST00000546537 ACO2Q99798 780 aaKnown RBP11.76□□□□□ -0.53
TMEM116-203ENST00000546537 LPIN3Q9BQK8 851 aa11.76□□□□□ -0.53
TMEM116-203ENST00000546537 TTC12Q9H892 705 aaPredicted RBP11.76□□□□□ -0.53
TMEM116-203ENST00000546537 CAPN10Q9HC96 672 aa11.76□□□□□ -0.53
TMEM116-203ENST00000546537 MMP17Q9ULZ9 603 aa11.76□□□□□ -0.53
TMEM116-203ENST00000546537 GON4LQ3T8J9 2241 aa11.75□□□□□ -0.53
TMEM116-203ENST00000546537 URB1O60287 2271 aaKnown RBP11.75□□□□□ -0.53
TMEM116-203ENST00000546537 KALRNO60229 2985 aa11.75□□□□□ -0.53
TMEM116-203ENST00000546537 K7ERI5 159 aa11.75□□□□□ -0.53
TMEM116-203ENST00000546537 MAP3K13O43283 966 aa11.75□□□□□ -0.53
TMEM116-203ENST00000546537 SERPINF2P08697 491 aa11.75□□□□□ -0.53
TMEM116-203ENST00000546537 ATF6P18850 670 aa11.75□□□□□ -0.53
TMEM116-203ENST00000546537 CYP11B2P19099 503 aa11.75□□□□□ -0.53
TMEM116-203ENST00000546537 ITPKAP23677 461 aa11.75□□□□□ -0.53
TMEM116-203ENST00000546537 DDX6P26196 483 aaKnown RBP eCLIP11.75□□□□□ -0.53
TMEM116-203ENST00000546537 TUFMP49411 452 aaKnown RBP11.75□□□□□ -0.53
TMEM116-203ENST00000546537 AARSP49588 968 aaKnown RBP eCLIP11.75□□□□□ -0.53
TMEM116-203ENST00000546537 GFPT1Q06210 699 aaPredicted RBP11.75□□□□□ -0.53
TMEM116-203ENST00000546537 VEPH1Q14D04 833 aa11.75□□□□□ -0.53
TMEM116-203ENST00000546537 DUOXA1Q1HG43 343 aa11.75□□□□□ -0.53
TMEM116-203ENST00000546537 C2orf27AQ580R0 203 aa11.75□□□□□ -0.53
TMEM116-203ENST00000546537 EARS2Q5JPH6 523 aaKnown RBP11.75□□□□□ -0.53
TMEM116-203ENST00000546537 LMBRD2Q68DH5 695 aaPredicted RBP11.75□□□□□ -0.53
TMEM116-203ENST00000546537 BLOC1S2Q6QNY1 142 aa11.75□□□□□ -0.53
TMEM116-203ENST00000546537 PADI6Q6TGC4 694 aa11.75□□□□□ -0.53
TMEM116-203ENST00000546537 USP37Q86T82 979 aa11.75□□□□□ -0.53
TMEM116-203ENST00000546537 TMEM150AQ86TG1 271 aa11.75□□□□□ -0.53
TMEM116-203ENST00000546537 CATSPER3Q86XQ3 398 aa11.75□□□□□ -0.53
TMEM116-203ENST00000546537 PNPLA1Q8N8W4 532 aa11.75□□□□□ -0.53
TMEM116-203ENST00000546537 MAB21L3Q8N8X9 362 aa11.75□□□□□ -0.53
TMEM116-203ENST00000546537 SLC39A7Q92504 469 aa11.75□□□□□ -0.53
TMEM116-203ENST00000546537 CRELD1Q96HD1 420 aa11.75□□□□□ -0.53
TMEM116-203ENST00000546537 SPACA7Q96KW9 195 aa11.75□□□□□ -0.53
TMEM116-203ENST00000546537 JAKMIP1Q96N16 626 aaKnown RBP11.75□□□□□ -0.53
TMEM116-203ENST00000546537 CAMK1GQ96NX5 476 aa11.75□□□□□ -0.53
TMEM116-203ENST00000546537 DNAAF2Q9NVR5 837 aaKnown RBP11.75□□□□□ -0.53
TMEM116-203ENST00000546537 TUBGCP4Q9UGJ1 667 aa11.75□□□□□ -0.53
TMEM116-203ENST00000546537 HELZP42694 1942 aaKnown RBP11.74□□□□□ -0.53
TMEM116-203ENST00000546537 ASXL3Q9C0F0 2248 aa11.74□□□□□ -0.53
TMEM116-203ENST00000546537 A0A087WV48 116 aa11.74□□□□□ -0.53
TMEM116-203ENST00000546537 K7EQS6 105 aa11.74□□□□□ -0.53
TMEM116-203ENST00000546537 ARHGAP33O14559 1287 aa11.74□□□□□ -0.53
TMEM116-203ENST00000546537 SH3BP5O60239 455 aa11.74□□□□□ -0.53
TMEM116-203ENST00000546537 ALDH1A2O94788 518 aa11.74□□□□□ -0.53
TMEM116-203ENST00000546537 F11P03951 625 aa11.74□□□□□ -0.53
TMEM116-203ENST00000546537 MCF2P10911 925 aa11.74□□□□□ -0.53
TMEM116-203ENST00000546537 HNRNPLP14866 589 aaKnown RBP eCLIP11.74□□□□□ -0.535e-12■■■■■ 33.5
TMEM116-203ENST00000546537 RPS6KB1P23443 525 aa11.74□□□□□ -0.53
TMEM116-203ENST00000546537 LRPAP1P30533 357 aa11.74□□□□□ -0.53
TMEM116-203ENST00000546537 HSPA4P34932 840 aa11.74□□□□□ -0.53
TMEM116-203ENST00000546537 SLC14A1Q13336 389 aa11.74□□□□□ -0.53
TMEM116-203ENST00000546537 ZNF268Q14587 947 aaPredicted RBP11.74□□□□□ -0.53
TMEM116-203ENST00000546537 MTF1Q14872 753 aa11.74□□□□□ -0.53
TMEM116-203ENST00000546537 OVOS1Q6IE37 1185 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms