RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 TULP1O00294 542 aaPredicted RBP13.85□□□□□ -0.19
SCAF11-208ENST00000546534 JAK2O60674 1132 aa13.85□□□□□ -0.19
SCAF11-208ENST00000546534 TOM1L1O75674 476 aa13.85□□□□□ -0.19
SCAF11-208ENST00000546534 RHOBTB1O94844 696 aa13.85□□□□□ -0.19
SCAF11-208ENST00000546534 CXCL8P10145 99 aa13.85□□□□□ -0.19
SCAF11-208ENST00000546534 TYMPP19971 482 aa13.85□□□□□ -0.19
SCAF11-208ENST00000546534 GUCY2FP51841 1108 aa13.85□□□□□ -0.19
SCAF11-208ENST00000546534 MAPK7Q13164 816 aa13.85□□□□□ -0.19
SCAF11-208ENST00000546534 NOLC1Q14978 699 aaKnown RBP eCLIP13.85□□□□□ -0.19
SCAF11-208ENST00000546534 ZBTB6Q15916 424 aa13.85□□□□□ -0.19
SCAF11-208ENST00000546534 NAIF1Q69YI7 327 aaPredicted RBP13.85□□□□□ -0.19
SCAF11-208ENST00000546534 TRIM68Q6AZZ1 485 aa13.85□□□□□ -0.19
SCAF11-208ENST00000546534 GATA6Q92908 595 aa13.85□□□□□ -0.19
SCAF11-208ENST00000546534 RUSC1Q9BVN2 902 aa13.85□□□□□ -0.19
SCAF11-208ENST00000546534 SCNM1Q9BWG6 230 aa13.85□□□□□ -0.19
SCAF11-208ENST00000546534 EBF3Q9H4W6 596 aa13.85□□□□□ -0.19
SCAF11-208ENST00000546534 DDX19AQ9NUU7 478 aaKnown RBP13.85□□□□□ -0.19
SCAF11-208ENST00000546534 NUP210Q8TEM1 1887 aaPredicted RBP13.84□□□□□ -0.19
SCAF11-208ENST00000546534 KIF26AQ9ULI4 1882 aaPredicted RBP13.84□□□□□ -0.19
SCAF11-208ENST00000546534 TTC26A0AVF1 554 aa13.84□□□□□ -0.19
SCAF11-208ENST00000546534 SFI1A8K8P3 1242 aa13.84□□□□□ -0.19
SCAF11-208ENST00000546534 E9PMD0 336 aa13.84□□□□□ -0.19
SCAF11-208ENST00000546534 PPEF2O14830 753 aa13.84□□□□□ -0.19
SCAF11-208ENST00000546534 ATF6P18850 670 aa13.84□□□□□ -0.19
SCAF11-208ENST00000546534 CDC25CP30307 473 aa13.84□□□□□ -0.19
SCAF11-208ENST00000546534 GALK1P51570 392 aa13.84□□□□□ -0.19
SCAF11-208ENST00000546534 GUCY1B3Q02153 619 aa13.84□□□□□ -0.19
SCAF11-208ENST00000546534 ME3Q16798 604 aa13.84□□□□□ -0.19
SCAF11-208ENST00000546534 ARMCX5Q6P1M9 558 aa13.84□□□□□ -0.19
SCAF11-208ENST00000546534 CMTM8Q8IZV2 173 aa13.84□□□□□ -0.19
SCAF11-208ENST00000546534 GTF3C6Q969F1 213 aa13.84□□□□□ -0.19
SCAF11-208ENST00000546534 DRC1Q96MC2 740 aa13.84□□□□□ -0.19
SCAF11-208ENST00000546534 GCNAQ96QF7 691 aa13.84□□□□□ -0.19
SCAF11-208ENST00000546534 SEPT5Q99719 369 aaPredicted RBP13.84□□□□□ -0.19
SCAF11-208ENST00000546534 PLEKHA5Q9HAU0 1116 aa13.84□□□□□ -0.19
SCAF11-208ENST00000546534 HSFX1Q9UBD0 423 aa13.84□□□□□ -0.19
SCAF11-208ENST00000546534 LRWD1Q9UFC0 647 aa13.84□□□□□ -0.19
SCAF11-208ENST00000546534 UBQLN1Q9UMX0 589 aaKnown RBP13.84□□□□□ -0.19
SCAF11-208ENST00000546534 CCL26Q9Y258 94 aa13.84□□□□□ -0.19
SCAF11-208ENST00000546534 CITO14578 2027 aa13.84□□□□□ -0.19
SCAF11-208ENST00000546534 EML5Q05BV3 1969 aa13.83□□□□□ -0.19
SCAF11-208ENST00000546534 FASNP49327 2511 aaKnown RBP13.83□□□□□ -0.2
SCAF11-208ENST00000546534 CLDN3O15551 220 aa13.83□□□□□ -0.2
SCAF11-208ENST00000546534 CLTAP09496 248 aa13.83□□□□□ -0.2
SCAF11-208ENST00000546534 CEACAM1P13688 526 aa13.83□□□□□ -0.2
SCAF11-208ENST00000546534 ARSAP15289 507 aa13.83□□□□□ -0.2
SCAF11-208ENST00000546534 CYP3A5P20815 502 aa13.83□□□□□ -0.2
SCAF11-208ENST00000546534 CSRP1P21291 193 aaKnown RBP13.83□□□□□ -0.2
SCAF11-208ENST00000546534 U2AF2P26368 475 aaKnown RBP eCLIP13.83□□□□□ -0.2
SCAF11-208ENST00000546534 GBP1P32455 592 aa13.83□□□□□ -0.2
SCAF11-208ENST00000546534 MCL1Q07820 350 aa13.83□□□□□ -0.2
SCAF11-208ENST00000546534 STRN3Q13033 797 aa13.83□□□□□ -0.2
SCAF11-208ENST00000546534 ORC2Q13416 577 aaPredicted RBP13.83□□□□□ -0.2
SCAF11-208ENST00000546534 VEPH1Q14D04 833 aa13.83□□□□□ -0.2
SCAF11-208ENST00000546534 KARSQ15046 597 aaKnown RBP13.83□□□□□ -0.2
SCAF11-208ENST00000546534 ANKRD1Q15327 319 aa13.83□□□□□ -0.2
SCAF11-208ENST00000546534 SYT13Q7L8C5 426 aa13.83□□□□□ -0.2
SCAF11-208ENST00000546534 OR10T2Q8NGX3 314 aa13.83□□□□□ -0.2
SCAF11-208ENST00000546534 RPLP0P6Q8NHW5 317 aa13.83□□□□□ -0.2
SCAF11-208ENST00000546534 GIPC2Q8TF65 315 aa13.83□□□□□ -0.2
SCAF11-208ENST00000546534 USP13Q92995 863 aaPredicted RBP13.83□□□□□ -0.2
SCAF11-208ENST00000546534 SENP8Q96LD8 212 aa13.83□□□□□ -0.2
SCAF11-208ENST00000546534 NTPCRQ9BSD7 190 aaKnown RBP13.83□□□□□ -0.2
SCAF11-208ENST00000546534 HAPLN2Q9GZV7 340 aa13.83□□□□□ -0.2
SCAF11-208ENST00000546534 EBF1Q9UH73 591 aa13.83□□□□□ -0.2
SCAF11-208ENST00000546534 DNM3Q9UQ16 869 aa13.83□□□□□ -0.2
SCAF11-208ENST00000546534 INVSQ9Y283 1065 aa13.83□□□□□ -0.2
SCAF11-208ENST00000546534 ZZEF1O43149 2961 aa13.82□□□□□ -0.2
SCAF11-208ENST00000546534 LACTBL1A8MY62 500 aa13.82□□□□□ -0.2
SCAF11-208ENST00000546534 PATE3B3GLJ2 98 aa13.82□□□□□ -0.2
SCAF11-208ENST00000546534 CDX4O14627 284 aaPredicted RBP13.82□□□□□ -0.2
SCAF11-208ENST00000546534 KHNYNO15037 678 aaKnown RBP13.82□□□□□ -0.2
SCAF11-208ENST00000546534 APBB3O95704 486 aa13.82□□□□□ -0.2
SCAF11-208ENST00000546534 ODC1P11926 461 aa13.82□□□□□ -0.2
SCAF11-208ENST00000546534 HOXB1P14653 301 aaPredicted RBP13.82□□□□□ -0.2
SCAF11-208ENST00000546534 DRD1P21728 446 aa13.82□□□□□ -0.2
SCAF11-208ENST00000546534 AVPR1AP37288 418 aa13.82□□□□□ -0.2
SCAF11-208ENST00000546534 TNFSF9P41273 254 aa13.82□□□□□ -0.2
SCAF11-208ENST00000546534 MLLT3P42568 568 aaPredicted RBP13.82□□□□□ -0.2
SCAF11-208ENST00000546534 TUFMP49411 452 aaKnown RBP13.82□□□□□ -0.2
SCAF11-208ENST00000546534 LILRA4P59901 499 aa13.82□□□□□ -0.2
SCAF11-208ENST00000546534 AMPD2Q01433 879 aa13.82□□□□□ -0.2
SCAF11-208ENST00000546534 RING1Q06587 406 aa13.82□□□□□ -0.2
SCAF11-208ENST00000546534 BFSP1Q12934 665 aa13.82□□□□□ -0.2
SCAF11-208ENST00000546534 DMC1Q14565 340 aa13.82□□□□□ -0.2
SCAF11-208ENST00000546534 TAF12Q16514 161 aa13.82□□□□□ -0.2
SCAF11-208ENST00000546534 MGAT5BQ3V5L5 792 aa13.82□□□□□ -0.2
SCAF11-208ENST00000546534 FBXO43Q4G163 708 aa13.82□□□□□ -0.2
SCAF11-208ENST00000546534 SLC39A12Q504Y0 691 aa13.82□□□□□ -0.2
SCAF11-208ENST00000546534 RINT1Q6NUQ1 792 aa13.82□□□□□ -0.2
SCAF11-208ENST00000546534 LRSAM1Q6UWE0 723 aa13.82□□□□□ -0.2
SCAF11-208ENST00000546534 ZPBP2Q6X784 338 aa13.82□□□□□ -0.2
SCAF11-208ENST00000546534 C1orf186Q6ZWK4 172 aa13.82□□□□□ -0.2
SCAF11-208ENST00000546534 TMEM150AQ86TG1 271 aa13.82□□□□□ -0.2
SCAF11-208ENST00000546534 C4orf32Q8N8J7 132 aa13.82□□□□□ -0.2
SCAF11-208ENST00000546534 MAB21L3Q8N8X9 362 aa13.82□□□□□ -0.2
SCAF11-208ENST00000546534 TMEM161BQ8NDZ6 487 aa13.82□□□□□ -0.2
SCAF11-208ENST00000546534 RIN3Q8TB24 985 aa13.82□□□□□ -0.2
SCAF11-208ENST00000546534 SNX29Q8TEQ0 813 aa13.82□□□□□ -0.2
SCAF11-208ENST00000546534 ZCCHC14Q8WYQ9 949 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms