RNA–Protein interactions for RNA: ENST00000546417.5

BRF1-207, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-207ENST00000546417 TDP1Q9NUW8 608 aa13.07□□□□□ -0.32
BRF1-207ENST00000546417 PHLPP2Q6ZVD8 1323 aa13.07□□□□□ -0.32
BRF1-207ENST00000546417 FAM205CA6NFA0 338 aa13.06□□□□□ -0.32
BRF1-207ENST00000546417 NEMFO60524 1076 aa13.06□□□□□ -0.32
BRF1-207ENST00000546417 MED24O75448 989 aa13.06□□□□□ -0.32
BRF1-207ENST00000546417 SOAT2O75908 522 aa13.06□□□□□ -0.32
BRF1-207ENST00000546417 DDX6P26196 483 aaKnown RBP eCLIP13.06□□□□□ -0.32
BRF1-207ENST00000546417 U2AF2P26368 475 aaKnown RBP eCLIP13.06□□□□□ -0.32
BRF1-207ENST00000546417 ERICH6BQ5W0A0 696 aa13.06□□□□□ -0.32
BRF1-207ENST00000546417 OVOS1Q6IE37 1185 aa13.06□□□□□ -0.32
BRF1-207ENST00000546417 ANO7Q6IWH7 933 aa13.06□□□□□ -0.32
BRF1-207ENST00000546417 SLC23A3Q6PIS1 610 aa13.06□□□□□ -0.32
BRF1-207ENST00000546417 DSTYKQ6XUX3 929 aa13.06□□□□□ -0.32
BRF1-207ENST00000546417 MAB21L3Q8N8X9 362 aa13.06□□□□□ -0.32
BRF1-207ENST00000546417 GLIS3Q8NEA6 775 aa13.06□□□□□ -0.32
BRF1-207ENST00000546417 USP13Q92995 863 aaPredicted RBP13.06□□□□□ -0.32
BRF1-207ENST00000546417 BBC3Q96PG8 261 aaPredicted RBP13.06□□□□□ -0.32
BRF1-207ENST00000546417 MTMR9Q96QG7 549 aa13.06□□□□□ -0.32
BRF1-207ENST00000546417 LPIN3Q9BQK8 851 aa13.06□□□□□ -0.32
BRF1-207ENST00000546417 TMEM134Q9H6X4 195 aa13.06□□□□□ -0.32
BRF1-207ENST00000546417 ECT2Q9H8V3 914 aa13.06□□□□□ -0.32
BRF1-207ENST00000546417 BRMS1Q9HCU9 246 aa13.06□□□□□ -0.32
BRF1-207ENST00000546417 GJB4Q9NTQ9 266 aa13.06□□□□□ -0.32
BRF1-207ENST00000546417 CCL26Q9Y258 94 aa13.06□□□□□ -0.32
BRF1-207ENST00000546417 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.06□□□□□ -0.32
BRF1-207ENST00000546417 LAMA5O15230 3695 aa13.06□□□□□ -0.32
BRF1-207ENST00000546417 TNRC6BQ9UPQ9 1833 aaKnown RBP13.06□□□□□ -0.32
BRF1-207ENST00000546417 ACACAQ13085 2346 aa13.06□□□□□ -0.32
BRF1-207ENST00000546417 PTPRDP23468 1912 aa13.05□□□□□ -0.32
BRF1-207ENST00000546417 GON4LQ3T8J9 2241 aa13.05□□□□□ -0.32
BRF1-207ENST00000546417 CCDC169A6NNP5 214 aa13.05□□□□□ -0.32
BRF1-207ENST00000546417 MAP3K13O43283 966 aa13.05□□□□□ -0.32
BRF1-207ENST00000546417 ALDH1A2O94788 518 aa13.05□□□□□ -0.32
BRF1-207ENST00000546417 LARGE1O95461 756 aa13.05□□□□□ -0.32
BRF1-207ENST00000546417 TYMPP19971 482 aa13.05□□□□□ -0.32
BRF1-207ENST00000546417 RPA1P27694 616 aa13.05□□□□□ -0.32
BRF1-207ENST00000546417 LRPAP1P30533 357 aa13.05□□□□□ -0.32
BRF1-207ENST00000546417 KRT2P35908 639 aa13.05□□□□□ -0.32
BRF1-207ENST00000546417 AARSP49588 968 aaKnown RBP eCLIP13.05□□□□□ -0.32
BRF1-207ENST00000546417 STK3Q13188 491 aa13.05□□□□□ -0.32
BRF1-207ENST00000546417 NR5A1Q13285 461 aa13.05□□□□□ -0.32
BRF1-207ENST00000546417 SLC10A6Q3KNW5 377 aa13.05□□□□□ -0.32
BRF1-207ENST00000546417 MGAT5BQ3V5L5 792 aa13.05□□□□□ -0.32
BRF1-207ENST00000546417 LMBRD2Q68DH5 695 aaPredicted RBP13.05□□□□□ -0.32
BRF1-207ENST00000546417 NAIF1Q69YI7 327 aaPredicted RBP13.05□□□□□ -0.32
BRF1-207ENST00000546417 MPZL3Q6UWV2 235 aa13.05□□□□□ -0.32
BRF1-207ENST00000546417 RUFY3Q7L099 469 aa13.05□□□□□ -0.32
BRF1-207ENST00000546417 HNRNPLLQ8WVV9 542 aaKnown RBP13.05□□□□□ -0.32
BRF1-207ENST00000546417 EZH1Q92800 747 aaPredicted RBP13.05□□□□□ -0.32
BRF1-207ENST00000546417 SPACA7Q96KW9 195 aa13.05□□□□□ -0.32
BRF1-207ENST00000546417 SEPT5Q99719 369 aaPredicted RBP13.05□□□□□ -0.32
BRF1-207ENST00000546417 TARS2Q9BW92 718 aaKnown RBP13.05□□□□□ -0.32
BRF1-207ENST00000546417 POLD4Q9HCU8 107 aa13.05□□□□□ -0.32
BRF1-207ENST00000546417 TMEM74BQ9NUR3 256 aa13.05□□□□□ -0.32
BRF1-207ENST00000546417 TUBGCP4Q9UGJ1 667 aa13.05□□□□□ -0.32
BRF1-207ENST00000546417 SMG1Q96Q15 3661 aaKnown RBP13.04□□□□□ -0.32
BRF1-207ENST00000546417 ADAMTS9Q9P2N4 1935 aa13.04□□□□□ -0.32
BRF1-207ENST00000546417 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.04□□□□□ -0.32
BRF1-207ENST00000546417 OPHN1O60890 802 aa13.04□□□□□ -0.32
BRF1-207ENST00000546417 CDC45O75419 566 aa13.04□□□□□ -0.32
BRF1-207ENST00000546417 CFIP05156 583 aa13.04□□□□□ -0.32
BRF1-207ENST00000546417 PROZP22891 400 aa13.04□□□□□ -0.32
BRF1-207ENST00000546417 HOXD12P35452 270 aa13.04□□□□□ -0.32
BRF1-207ENST00000546417 NR1H3Q13133 447 aa13.04□□□□□ -0.32
BRF1-207ENST00000546417 SPDYCQ5MJ68 293 aa13.04□□□□□ -0.32
BRF1-207ENST00000546417 TMEFF1Q8IYR6 380 aa13.04□□□□□ -0.32
BRF1-207ENST00000546417 MDGA1Q8NFP4 955 aa13.04□□□□□ -0.32
BRF1-207ENST00000546417 ERMNQ8TAM6 284 aa13.04□□□□□ -0.32
BRF1-207ENST00000546417 CEP76Q8TAP6 659 aa13.04□□□□□ -0.32
BRF1-207ENST00000546417 ATP2A3Q93084 1043 aa13.04□□□□□ -0.32
BRF1-207ENST00000546417 LRIG1Q96JA1 1093 aa13.04□□□□□ -0.32
BRF1-207ENST00000546417 PLEKHA5Q9HAU0 1116 aa13.04□□□□□ -0.32
BRF1-207ENST00000546417 SCUBE2Q9NQ36 999 aa13.04□□□□□ -0.32
BRF1-207ENST00000546417 STK36Q9NRP7 1315 aa13.04□□□□□ -0.32
BRF1-207ENST00000546417 HARSP12081 509 aaKnown RBP13.03□□□□□ -0.32
BRF1-207ENST00000546417 ATF6P18850 670 aa13.03□□□□□ -0.32
BRF1-207ENST00000546417 MUTP22033 750 aa13.03□□□□□ -0.32
BRF1-207ENST00000546417 P2RY2P41231 377 aa13.03□□□□□ -0.32
BRF1-207ENST00000546417 PEX3P56589 373 aa13.03□□□□□ -0.32
BRF1-207ENST00000546417 NLRP12P59046 1061 aa13.03□□□□□ -0.32
BRF1-207ENST00000546417 FAM193AP78312 1265 aa13.03□□□□□ -0.32
BRF1-207ENST00000546417 GFPT1Q06210 699 aaPredicted RBP13.03□□□□□ -0.32
BRF1-207ENST00000546417 C19orf57Q0VDD7 668 aa13.03□□□□□ -0.32
BRF1-207ENST00000546417 ZNF268Q14587 947 aaPredicted RBP13.03□□□□□ -0.32
BRF1-207ENST00000546417 MTF1Q14872 753 aa13.03□□□□□ -0.32
BRF1-207ENST00000546417 CRY1Q16526 586 aa13.03□□□□□ -0.32
BRF1-207ENST00000546417 DUOXA1Q1HG43 343 aa13.03□□□□□ -0.32
BRF1-207ENST00000546417 C2orf27AQ580R0 203 aa13.03□□□□□ -0.32
BRF1-207ENST00000546417 LYSMD4Q5XG99 296 aa13.03□□□□□ -0.32
BRF1-207ENST00000546417 TTC30AQ86WT1 665 aa13.03□□□□□ -0.32
BRF1-207ENST00000546417 OLIG1Q8TAK6 271 aa13.03□□□□□ -0.32
BRF1-207ENST00000546417 ADAM32Q8TC27 787 aa13.03□□□□□ -0.32
BRF1-207ENST00000546417 USP33Q8TEY7 942 aa13.03□□□□□ -0.32
BRF1-207ENST00000546417 GIPC2Q8TF65 315 aa13.03□□□□□ -0.32
BRF1-207ENST00000546417 ADAMTS14Q8WXS8 1223 aa13.03□□□□□ -0.32
BRF1-207ENST00000546417 MRPS31Q92665 395 aaKnown RBP13.03□□□□□ -0.32
BRF1-207ENST00000546417 TNFRSF25Q93038 417 aa13.03□□□□□ -0.32
BRF1-207ENST00000546417 LARP6Q9BRS8 491 aaKnown RBP13.03□□□□□ -0.32
BRF1-207ENST00000546417 GTPBP2Q9BX10 602 aaKnown RBP13.03□□□□□ -0.32
BRF1-207ENST00000546417 DUS2Q9NX74 493 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms