RNA–Protein interactions for RNA: ENST00000546411.6

CUX1-211, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-211ENST00000546411 GJC2Q5T442 439 aaPredicted RBP16.44■□□□□ 0.22
CUX1-211ENST00000546411 TRIM42Q8IWZ5 723 aa16.44■□□□□ 0.22
CUX1-211ENST00000546411 EXT2Q93063 718 aa16.44■□□□□ 0.22
CUX1-211ENST00000546411 PGBD4Q96DM1 585 aa16.44■□□□□ 0.22
CUX1-211ENST00000546411 KREMEN1Q96MU8 473 aa16.44■□□□□ 0.22
CUX1-211ENST00000546411 ROPN1BQ9BZX4 212 aaPredicted RBP16.44■□□□□ 0.22
CUX1-211ENST00000546411 ROPN1Q9HAT0 212 aaPredicted RBP16.44■□□□□ 0.22
CUX1-211ENST00000546411 CYP4F11Q9HBI6 524 aa16.44■□□□□ 0.22
CUX1-211ENST00000546411 WDR35Q9P2L0 1181 aa16.44■□□□□ 0.22
CUX1-211ENST00000546411 PSMC3IPQ9P2W1 217 aaPredicted RBP16.44■□□□□ 0.22
CUX1-211ENST00000546411 DNPEPQ9ULA0 475 aa16.44■□□□□ 0.22
CUX1-211ENST00000546411 TTC4O95801 387 aa16.44■□□□□ 0.22
CUX1-211ENST00000546411 CENPCQ03188 943 aa16.44■□□□□ 0.22
CUX1-211ENST00000546411 DCAF6Q58WW2 860 aa16.44■□□□□ 0.22
CUX1-211ENST00000546411 RNF139Q8WU17 664 aa16.44■□□□□ 0.22
CUX1-211ENST00000546411 DDX20Q9UHI6 824 aaKnown RBP16.44■□□□□ 0.22
CUX1-211ENST00000546411 ADM5C9JUS6 153 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 DIAPH2O60879 1101 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 ZNF286BP0CG31 522 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 TYK2P29597 1187 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 MARSP56192 900 aaKnown RBP16.43■□□□□ 0.22
CUX1-211ENST00000546411 KDSRQ06136 332 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 BMT2Q1RMZ1 405 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 GOLGA7BQ2TAP0 167 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 TFDP3Q5H9I0 405 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 ATG16L1Q676U5 607 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 KCNV1Q6PIU1 500 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 WDR75Q8IWA0 830 aaKnown RBP16.43■□□□□ 0.22
CUX1-211ENST00000546411 ANKRD13AQ8IZ07 590 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 ABI1Q8IZP0 508 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 GABPB2Q8TAK5 448 aaPredicted RBP16.43■□□□□ 0.22
CUX1-211ENST00000546411 CCDC124Q96CT7 223 aaKnown RBP16.43■□□□□ 0.22
CUX1-211ENST00000546411 NOP53Q9NZM5 478 aaKnown RBP16.43■□□□□ 0.22
CUX1-211ENST00000546411 TCRBV7S2A1N4TA0A589 114 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 STAG3L1P0CL83 205 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 SRGAP2BP0DMP2 458 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 CYP2B6P20813 491 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 FKBP1AP62942 108 aaKnown RBP16.43■□□□□ 0.22
CUX1-211ENST00000546411 GCNT1Q02742 428 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 PTK7Q13308 1070 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 FAM71AQ8IYT1 594 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 AFG1LQ8WV93 481 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 SHC3Q92529 594 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 LENG9Q96B70 501 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 GH1P01241 217 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 PDHA1P08559 390 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 ETS1P14921 441 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 TMEM132BQ14DG7 1078 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 ARL13BQ3SXY8 428 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 MROH9Q5TGP6 573 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 SLC16A10Q8TF71 515 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 HES6Q96HZ4 224 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 MYCBPQ99417 103 aaPredicted RBP16.43■□□□□ 0.22
CUX1-211ENST00000546411 PCMTD2Q9NV79 361 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 MAP3K20Q9NYL2 800 aaKnown RBP16.43■□□□□ 0.22
CUX1-211ENST00000546411 CYP39A1Q9NYL5 469 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 NAALADL1Q9UQQ1 740 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 AFG3L2Q9Y4W6 797 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 SPEF2Q9C093 1822 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 OPHN1O60890 802 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 TNFSF9P41273 254 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 MMEL1Q495T6 779 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 MPZL3Q6UWV2 235 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 CEP120Q8N960 986 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 CLMNQ96JQ2 1002 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 SERPINB12Q96P63 405 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 STAP1Q9ULZ2 295 aa16.43■□□□□ 0.22
CUX1-211ENST00000546411 ZC3H11AO75152 810 aaKnown RBP eCLIP16.42■□□□□ 0.223e-6■■■■□ 25.7
CUX1-211ENST00000546411 HSPA4LO95757 839 aa16.42■□□□□ 0.22
CUX1-211ENST00000546411 INSRRP14616 1297 aa16.42■□□□□ 0.22
CUX1-211ENST00000546411 CPA2P48052 419 aa16.42■□□□□ 0.22
CUX1-211ENST00000546411 RPL7AP62424 266 aaKnown RBP16.42■□□□□ 0.22
CUX1-211ENST00000546411 C4orf50Q6ZRC1 276 aa16.42■□□□□ 0.22
CUX1-211ENST00000546411 IQCKQ8N0W5 287 aa16.42■□□□□ 0.22
CUX1-211ENST00000546411 DTX3LQ8TDB6 740 aa16.42■□□□□ 0.22
CUX1-211ENST00000546411 USP33Q8TEY7 942 aa16.42■□□□□ 0.22
CUX1-211ENST00000546411 DCLK3Q9C098 648 aa16.42■□□□□ 0.22
CUX1-211ENST00000546411 PSTPIP1O43586 416 aa16.42■□□□□ 0.22
CUX1-211ENST00000546411 MAPTP10636 758 aaKnown RBP16.42■□□□□ 0.22
CUX1-211ENST00000546411 CYP2C9P11712 490 aa16.42■□□□□ 0.22
CUX1-211ENST00000546411 GPD1P21695 349 aa16.42■□□□□ 0.22
CUX1-211ENST00000546411 FECHP22830 423 aa16.42■□□□□ 0.22
CUX1-211ENST00000546411 GLRA2P23416 452 aa16.42■□□□□ 0.22
CUX1-211ENST00000546411 ZNF200P98182 395 aaPredicted RBP16.42■□□□□ 0.22
CUX1-211ENST00000546411 METTL7BQ6UX53 244 aa16.42■□□□□ 0.22
CUX1-211ENST00000546411 SPOCD1Q6ZMY3 1216 aa16.42■□□□□ 0.22
CUX1-211ENST00000546411 MOB2Q70IA6 237 aa16.42■□□□□ 0.22
CUX1-211ENST00000546411 CCNYL1Q8N7R7 359 aa16.42■□□□□ 0.22
CUX1-211ENST00000546411 NEUROG2Q9H2A3 272 aa16.42■□□□□ 0.22
CUX1-211ENST00000546411 ZFATQ9P243 1243 aa16.42■□□□□ 0.22
CUX1-211ENST00000546411 C6orf222P0C671 652 aaPredicted RBP16.42■□□□□ 0.22
CUX1-211ENST00000546411 SSTR1P30872 391 aa16.42■□□□□ 0.22
CUX1-211ENST00000546411 THOC5Q13769 683 aaKnown RBP16.42■□□□□ 0.22
CUX1-211ENST00000546411 BZW1Q7L1Q6 419 aaKnown RBP16.42■□□□□ 0.22
CUX1-211ENST00000546411 NIPA1Q7RTP0 329 aa16.42■□□□□ 0.22
CUX1-211ENST00000546411 CPNE8Q86YQ8 564 aa16.42■□□□□ 0.22
CUX1-211ENST00000546411 FBXO36Q8NEA4 188 aa16.42■□□□□ 0.22
CUX1-211ENST00000546411 SGSM3Q96HU1 749 aa16.42■□□□□ 0.22
CUX1-211ENST00000546411 FAM161BQ96MY7 647 aa16.42■□□□□ 0.22
CUX1-211ENST00000546411 TTC1Q99614 292 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms