RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 PCNX2A6NKB5 2137 aa7.48□□□□□ -1.21
CCDC60-205ENST00000546345 ACACAQ13085 2346 aa7.47□□□□□ -1.21
CCDC60-205ENST00000546345 SMIM35A0A1B0GVV1 85 aa7.47□□□□□ -1.21
CCDC60-205ENST00000546345 UPK3BL1B0FP48 263 aa7.47□□□□□ -1.21
CCDC60-205ENST00000546345 UPK3BL2E5RIL1 263 aa7.47□□□□□ -1.21
CCDC60-205ENST00000546345 RFPL2O75678 378 aa7.47□□□□□ -1.21
CCDC60-205ENST00000546345 STAM2O75886 525 aa7.47□□□□□ -1.21
CCDC60-205ENST00000546345 ATE1O95260 518 aa7.47□□□□□ -1.21
CCDC60-205ENST00000546345 CNPP09543 421 aaKnown RBP7.47□□□□□ -1.21
CCDC60-205ENST00000546345 CD72P21854 359 aa7.47□□□□□ -1.21
CCDC60-205ENST00000546345 ERCC5P28715 1186 aaPredicted RBP7.47□□□□□ -1.21
CCDC60-205ENST00000546345 HAND2P61296 217 aa7.47□□□□□ -1.21
CCDC60-205ENST00000546345 GPC5P78333 572 aa7.47□□□□□ -1.21
CCDC60-205ENST00000546345 ALX1Q15699 326 aa7.47□□□□□ -1.21
CCDC60-205ENST00000546345 MLF2Q15773 248 aaPredicted RBP7.47□□□□□ -1.21
CCDC60-205ENST00000546345 C20orf194Q5TEA3 1177 aa7.47□□□□□ -1.21
CCDC60-205ENST00000546345 SASS6Q6UVJ0 657 aa7.47□□□□□ -1.21
CCDC60-205ENST00000546345 GK5Q6ZS86 529 aa7.47□□□□□ -1.21
CCDC60-205ENST00000546345 ECHDC2Q86YB7 292 aa7.47□□□□□ -1.21
CCDC60-205ENST00000546345 FAM13CQ8NE31 585 aa7.47□□□□□ -1.21
CCDC60-205ENST00000546345 FGF14Q92915 247 aa7.47□□□□□ -1.21
CCDC60-205ENST00000546345 KLHL5Q96PQ7 755 aa7.47□□□□□ -1.21
CCDC60-205ENST00000546345 PPP1R16BQ96T49 567 aa7.47□□□□□ -1.21
CCDC60-205ENST00000546345 DPH2Q9BQC3 489 aaPredicted RBP7.47□□□□□ -1.21
CCDC60-205ENST00000546345 CCDC94Q9BW85 323 aaPredicted RBP7.47□□□□□ -1.21
CCDC60-205ENST00000546345 OSBPL6Q9BZF3 934 aa7.47□□□□□ -1.21
CCDC60-205ENST00000546345 VAT1LQ9HCJ6 419 aa7.47□□□□□ -1.21
CCDC60-205ENST00000546345 MAN1C1Q9NR34 630 aa7.47□□□□□ -1.21
CCDC60-205ENST00000546345 ZBTB40Q9NUA8 1239 aa7.47□□□□□ -1.21
CCDC60-205ENST00000546345 GINS2Q9Y248 185 aa7.47□□□□□ -1.21
CCDC60-205ENST00000546345 PI4KAP42356 2102 aa7.46□□□□□ -1.21
CCDC60-205ENST00000546345 APC2O95996 2303 aa7.46□□□□□ -1.21
CCDC60-205ENST00000546345 PTPRBP23467 1997 aa7.46□□□□□ -1.21
CCDC60-205ENST00000546345 TRIP11Q15643 1979 aa7.46□□□□□ -1.21
CCDC60-205ENST00000546345 SCO2A0A1W2PP80 73 aa7.46□□□□□ -1.22
CCDC60-205ENST00000546345 RRN3P2A6NIE6 340 aa7.46□□□□□ -1.22
CCDC60-205ENST00000546345 GCOM1H8Y6P7 765 aaPredicted RBP7.46□□□□□ -1.22
CCDC60-205ENST00000546345 ZBTB5O15062 677 aa7.46□□□□□ -1.22
CCDC60-205ENST00000546345 INPPL1O15357 1258 aa7.46□□□□□ -1.22
CCDC60-205ENST00000546345 DHX16O60231 1041 aaKnown RBP7.46□□□□□ -1.22
CCDC60-205ENST00000546345 HMMRO75330 724 aa7.46□□□□□ -1.22
CCDC60-205ENST00000546345 SLITRK5O94991 958 aa7.46□□□□□ -1.22
CCDC60-205ENST00000546345 TOP3BO95985 862 aaKnown RBP7.46□□□□□ -1.22
CCDC60-205ENST00000546345 FGAP02671 866 aa7.46□□□□□ -1.22
CCDC60-205ENST00000546345 TPM3P06753 285 aa7.46□□□□□ -1.22
CCDC60-205ENST00000546345 RETP07949 1114 aa7.46□□□□□ -1.22
CCDC60-205ENST00000546345 POLR2MP0CAP2 368 aa7.46□□□□□ -1.22
CCDC60-205ENST00000546345 LAMP2P13473 410 aa7.46□□□□□ -1.22
CCDC60-205ENST00000546345 ITGB5P18084 799 aa7.46□□□□□ -1.22
CCDC60-205ENST00000546345 SPINK2P20155 84 aa7.46□□□□□ -1.22
CCDC60-205ENST00000546345 LIMK1P53667 647 aa7.46□□□□□ -1.22
CCDC60-205ENST00000546345 POLGP54098 1239 aaPredicted RBP7.46□□□□□ -1.22
CCDC60-205ENST00000546345 CLCQ05315 142 aa7.46□□□□□ -1.22
CCDC60-205ENST00000546345 RAD51AP2Q09MP3 1159 aa7.46□□□□□ -1.22
CCDC60-205ENST00000546345 MTAPQ13126 283 aa7.46□□□□□ -1.22
CCDC60-205ENST00000546345 SRSF5Q13243 272 aaKnown RBP7.46□□□□□ -1.22
CCDC60-205ENST00000546345 SNW1Q13573 536 aaKnown RBP7.46□□□□□ -1.22
CCDC60-205ENST00000546345 UBXN2BQ14CS0 331 aa7.46□□□□□ -1.22
CCDC60-205ENST00000546345 NONOQ15233 471 aaKnown RBP eCLIP7.46□□□□□ -1.22
CCDC60-205ENST00000546345 SOWAHCQ53LP3 525 aaPredicted RBP7.46□□□□□ -1.22
CCDC60-205ENST00000546345 LETMD1Q6P1Q0 360 aa7.46□□□□□ -1.22
CCDC60-205ENST00000546345 MTHFD1LQ6UB35 978 aa7.46□□□□□ -1.22
CCDC60-205ENST00000546345 GET4Q7L5D6 327 aaPredicted RBP7.46□□□□□ -1.22
CCDC60-205ENST00000546345 DDX53Q86TM3 631 aaKnown RBP7.46□□□□□ -1.22
CCDC60-205ENST00000546345 DGKHQ86XP1 1220 aa7.46□□□□□ -1.22
CCDC60-205ENST00000546345 KIAA0319LQ8IZA0 1049 aa7.46□□□□□ -1.22
CCDC60-205ENST00000546345 SAMD3Q8N6K7 520 aa7.46□□□□□ -1.22
CCDC60-205ENST00000546345 ENAHQ8N8S7 591 aaPredicted RBP7.46□□□□□ -1.22
CCDC60-205ENST00000546345 FAM184AQ8NB25 1140 aa7.46□□□□□ -1.22
CCDC60-205ENST00000546345 OTUD7AQ8TE49 926 aaPredicted RBP7.46□□□□□ -1.22
CCDC60-205ENST00000546345 TMEM169Q96HH4 297 aa7.46□□□□□ -1.22
CCDC60-205ENST00000546345 IGSF21Q96ID5 467 aa7.46□□□□□ -1.22
CCDC60-205ENST00000546345 SMARCAD1Q9H4L7 1026 aa7.46□□□□□ -1.22
CCDC60-205ENST00000546345 CCSER2Q9H7U1 834 aa7.46□□□□□ -1.22
CCDC60-205ENST00000546345 KLHL3Q9UH77 587 aa7.46□□□□□ -1.22
CCDC60-205ENST00000546345 DDX19BQ9UMR2 479 aa7.46□□□□□ -1.22
CCDC60-205ENST00000546345 NUP210Q8TEM1 1887 aaPredicted RBP7.46□□□□□ -1.22
CCDC60-205ENST00000546345 TENM4Q6N022 2769 aa7.45□□□□□ -1.22
CCDC60-205ENST00000546345 ADAMTS9Q9P2N4 1935 aa7.45□□□□□ -1.22
CCDC60-205ENST00000546345 A0A0D9SFI3 127 aa7.45□□□□□ -1.22
CCDC60-205ENST00000546345 MEIS3P2A8K0S8 358 aa7.45□□□□□ -1.22
CCDC60-205ENST00000546345 CHURC1-FNTBB4DL54 471 aa7.45□□□□□ -1.22
CCDC60-205ENST00000546345 CYTH3O43739 400 aa7.45□□□□□ -1.22
CCDC60-205ENST00000546345 ZC3H11AO75152 810 aaKnown RBP eCLIP7.45□□□□□ -1.22
CCDC60-205ENST00000546345 GPR32O75388 356 aa7.45□□□□□ -1.22
CCDC60-205ENST00000546345 MED26O95402 600 aa7.45□□□□□ -1.22
CCDC60-205ENST00000546345 MBD3O95983 291 aa7.45□□□□□ -1.22
CCDC60-205ENST00000546345 PARP1P09874 1014 aaKnown RBP7.45□□□□□ -1.22
CCDC60-205ENST00000546345 MYBP10242 640 aa7.45□□□□□ -1.22
CCDC60-205ENST00000546345 MAGEA9P43362 315 aa7.45□□□□□ -1.22
CCDC60-205ENST00000546345 RPS9P46781 194 aaKnown RBP7.45□□□□□ -1.22
CCDC60-205ENST00000546345 DMTNQ08495 405 aa7.45□□□□□ -1.22
CCDC60-205ENST00000546345 KIZQ2M2Z5 673 aa7.45□□□□□ -1.22
CCDC60-205ENST00000546345 ZNF746Q6NUN9 644 aaPredicted RBP7.45□□□□□ -1.22
CCDC60-205ENST00000546345 PARM1Q6UWI2 310 aa7.45□□□□□ -1.22
CCDC60-205ENST00000546345 FAM214BQ7L5A3 538 aa7.45□□□□□ -1.22
CCDC60-205ENST00000546345 ZNF589Q86UQ0 364 aaPredicted RBP7.45□□□□□ -1.22
CCDC60-205ENST00000546345 PPFIBP1Q86W92 1011 aa7.45□□□□□ -1.22
CCDC60-205ENST00000546345 SLFN12Q8IYM2 578 aa7.45□□□□□ -1.22
CCDC60-205ENST00000546345 PDCL2Q8N4E4 241 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms