RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 KIF3AQ9Y496 699 aa13.59□□□□□ -0.23
COPS7A-221ENST00000546229 SPAG17Q6Q759 2223 aa13.59□□□□□ -0.23
COPS7A-221ENST00000546229 FAM13AO94988 1023 aa13.58□□□□□ -0.24
COPS7A-221ENST00000546229 FGF19O95750 216 aa13.58□□□□□ -0.24
COPS7A-221ENST00000546229 F11P03951 625 aa13.58□□□□□ -0.24
COPS7A-221ENST00000546229 HAPLN1P10915 354 aaPredicted RBP13.58□□□□□ -0.24
COPS7A-221ENST00000546229 LONP1P36776 959 aaKnown RBP13.58□□□□□ -0.24
COPS7A-221ENST00000546229 KCNA1Q09470 495 aa13.58□□□□□ -0.24
COPS7A-221ENST00000546229 SPEM2Q0P670 501 aa13.58□□□□□ -0.24
COPS7A-221ENST00000546229 LRRC32Q14392 662 aa13.58□□□□□ -0.24
COPS7A-221ENST00000546229 PTPAQ15257 358 aa13.58□□□□□ -0.24
COPS7A-221ENST00000546229 CCDC142Q17RM4 750 aa13.58□□□□□ -0.24
COPS7A-221ENST00000546229 WSCD1Q658N2 575 aa13.58□□□□□ -0.24
COPS7A-221ENST00000546229 LONP2Q86WA8 852 aa13.58□□□□□ -0.24
COPS7A-221ENST00000546229 LARP4BQ92615 738 aaKnown RBP13.58□□□□□ -0.24
COPS7A-221ENST00000546229 DNAJC19Q96DA6 116 aa13.58□□□□□ -0.24
COPS7A-221ENST00000546229 FAM84AQ96KN4 292 aa13.58□□□□□ -0.24
COPS7A-221ENST00000546229 CNTNAP3BQ96NU0 1288 aa13.58□□□□□ -0.24
COPS7A-221ENST00000546229 RTKNQ9BST9 563 aa13.58□□□□□ -0.24
COPS7A-221ENST00000546229 CNTNAP3Q9BZ76 1288 aa13.58□□□□□ -0.24
COPS7A-221ENST00000546229 ATXN3LQ9H3M9 355 aa13.58□□□□□ -0.24
COPS7A-221ENST00000546229 GMEB2Q9UKD1 530 aa13.58□□□□□ -0.24
COPS7A-221ENST00000546229 CDV3Q9UKY7 258 aaKnown RBP13.58□□□□□ -0.24
COPS7A-221ENST00000546229 USP18Q9UMW8 372 aa13.58□□□□□ -0.24
COPS7A-221ENST00000546229 SLC30A4O14863 429 aa13.57□□□□□ -0.24
COPS7A-221ENST00000546229 EXTL3O43909 919 aa13.57□□□□□ -0.24
COPS7A-221ENST00000546229 SDHBP21912 280 aa13.57□□□□□ -0.24
COPS7A-221ENST00000546229 UBA7P41226 1012 aa13.57□□□□□ -0.24
COPS7A-221ENST00000546229 MCM2P49736 904 aa13.57□□□□□ -0.24
COPS7A-221ENST00000546229 TAF6P49848 677 aa13.57□□□□□ -0.24
COPS7A-221ENST00000546229 DHX8Q14562 1220 aaKnown RBP13.57□□□□□ -0.24
COPS7A-221ENST00000546229 PPP2R5DQ14738 602 aa13.57□□□□□ -0.24
COPS7A-221ENST00000546229 PON2Q15165 354 aa13.57□□□□□ -0.24
COPS7A-221ENST00000546229 TMEM196Q5HYL7 178 aa13.57□□□□□ -0.24
COPS7A-221ENST00000546229 DGKKQ5KSL6 1271 aa13.57□□□□□ -0.24
COPS7A-221ENST00000546229 FSTL4Q6MZW2 842 aa13.57□□□□□ -0.24
COPS7A-221ENST00000546229 ZNF720Q7Z2F6 126 aa13.57□□□□□ -0.24
COPS7A-221ENST00000546229 ITIH5Q86UX2 942 aa13.57□□□□□ -0.24
COPS7A-221ENST00000546229 WDR5BQ86VZ2 330 aa13.57□□□□□ -0.24
COPS7A-221ENST00000546229 SFR1Q86XK3 245 aa13.57□□□□□ -0.24
COPS7A-221ENST00000546229 CMTM8Q8IZV2 173 aa13.57□□□□□ -0.24
COPS7A-221ENST00000546229 STKLD1Q8NE28 680 aa13.57□□□□□ -0.24
COPS7A-221ENST00000546229 TTC8Q8TAM2 541 aa13.57□□□□□ -0.24
COPS7A-221ENST00000546229 BPIFB1Q8TDL5 484 aa13.57□□□□□ -0.24
COPS7A-221ENST00000546229 CSGALNACT1Q8TDX6 532 aa13.57□□□□□ -0.24
COPS7A-221ENST00000546229 C2orf15Q8WU43 125 aaKnown RBP13.57□□□□□ -0.24
COPS7A-221ENST00000546229 LEO1Q8WVC0 666 aaPredicted RBP13.57□□□□□ -0.24
COPS7A-221ENST00000546229 EZH1Q92800 747 aaPredicted RBP13.57□□□□□ -0.24
COPS7A-221ENST00000546229 USP13Q92995 863 aaPredicted RBP13.57□□□□□ -0.24
COPS7A-221ENST00000546229 SECISBP2LQ93073 1101 aaKnown RBP13.57□□□□□ -0.24
COPS7A-221ENST00000546229 HVCN1Q96D96 273 aa13.57□□□□□ -0.24
COPS7A-221ENST00000546229 CALML4Q96GE6 196 aa13.57□□□□□ -0.24
COPS7A-221ENST00000546229 SEPT5Q99719 369 aaPredicted RBP13.57□□□□□ -0.24
COPS7A-221ENST00000546229 FGFBP2Q9BYJ0 223 aa13.57□□□□□ -0.24
COPS7A-221ENST00000546229 SEMA4GQ9NTN9 838 aa13.57□□□□□ -0.24
COPS7A-221ENST00000546229 AGO2Q9UKV8 859 aaKnown RBP13.57□□□□□ -0.24
COPS7A-221ENST00000546229 CEP295Q9C0D2 2601 aa13.57□□□□□ -0.24
COPS7A-221ENST00000546229 RALGAPA1Q6GYQ0 2036 aa13.56□□□□□ -0.24
COPS7A-221ENST00000546229 FRMD3A2A2Y4 597 aa13.56□□□□□ -0.24
COPS7A-221ENST00000546229 DCDC2BA2VCK2 349 aa13.56□□□□□ -0.24
COPS7A-221ENST00000546229 CYB561D2O14569 222 aa13.56□□□□□ -0.24
COPS7A-221ENST00000546229 CDC25CP30307 473 aa13.56□□□□□ -0.24
COPS7A-221ENST00000546229 CNR2P34972 360 aa13.56□□□□□ -0.24
COPS7A-221ENST00000546229 TUFMP49411 452 aaKnown RBP13.56□□□□□ -0.24
COPS7A-221ENST00000546229 GPR15P49685 360 aa13.56□□□□□ -0.24
COPS7A-221ENST00000546229 CASP5P51878 434 aa13.56□□□□□ -0.24
COPS7A-221ENST00000546229 KPNA1P52294 538 aaPredicted RBP13.56□□□□□ -0.24
COPS7A-221ENST00000546229 NLRP12P59046 1061 aa13.56□□□□□ -0.24
COPS7A-221ENST00000546229 PLCB2Q00722 1185 aa13.56□□□□□ -0.24
COPS7A-221ENST00000546229 SF3A1Q15459 793 aaKnown RBP13.56□□□□□ -0.24
COPS7A-221ENST00000546229 CSRP2Q16527 193 aa13.56□□□□□ -0.24
COPS7A-221ENST00000546229 NAIF1Q69YI7 327 aaPredicted RBP13.56□□□□□ -0.24
COPS7A-221ENST00000546229 ADALQ6DHV7 355 aa13.56□□□□□ -0.24
COPS7A-221ENST00000546229 PRR23CQ6ZRP0 262 aa13.56□□□□□ -0.24
COPS7A-221ENST00000546229 LIMS2Q7Z4I7 341 aa13.56□□□□□ -0.24
COPS7A-221ENST00000546229 BRAPQ7Z569 592 aa13.56□□□□□ -0.24
COPS7A-221ENST00000546229 YAF2Q8IY57 180 aa13.56□□□□□ -0.24
COPS7A-221ENST00000546229 SYNPOQ8N3V7 929 aa13.56□□□□□ -0.24
COPS7A-221ENST00000546229 FAM160A2Q8N612 972 aaPredicted RBP13.56□□□□□ -0.24
COPS7A-221ENST00000546229 C1orf127Q8N9H9 656 aa13.56□□□□□ -0.24
COPS7A-221ENST00000546229 SPPL2BQ8TCT7 592 aa13.56□□□□□ -0.24
COPS7A-221ENST00000546229 NETO1Q8TDF5 533 aa13.56□□□□□ -0.24
COPS7A-221ENST00000546229 FAM212AQ96EL1 285 aa13.56□□□□□ -0.24
COPS7A-221ENST00000546229 EPSTI1Q96J88 318 aa13.56□□□□□ -0.24
COPS7A-221ENST00000546229 PYM1Q9BRP8 204 aaKnown RBP13.56□□□□□ -0.24
COPS7A-221ENST00000546229 DPP3Q9NY33 737 aa13.56□□□□□ -0.24
COPS7A-221ENST00000546229 FBXO2Q9UK22 296 aaPredicted RBP13.56□□□□□ -0.24
COPS7A-221ENST00000546229 DSEQ9UL01 958 aa13.56□□□□□ -0.24
COPS7A-221ENST00000546229 L1RE1Q9UN81 338 aa13.56□□□□□ -0.24
COPS7A-221ENST00000546229 ZZEF1O43149 2961 aa13.56□□□□□ -0.24
COPS7A-221ENST00000546229 CNOT1A5YKK6 2376 aaKnown RBP13.56□□□□□ -0.24
COPS7A-221ENST00000546229 CHD6Q8TD26 2715 aa13.55□□□□□ -0.24
COPS7A-221ENST00000546229 MYMKA6NI61 221 aa13.55□□□□□ -0.24
COPS7A-221ENST00000546229 GDF9O60383 454 aa13.55□□□□□ -0.24
COPS7A-221ENST00000546229 TBCAO75347 108 aaKnown RBP13.55□□□□□ -0.24
COPS7A-221ENST00000546229 BMP15O95972 392 aa13.55□□□□□ -0.24
COPS7A-221ENST00000546229 ADRB1P08588 477 aa13.55□□□□□ -0.24
COPS7A-221ENST00000546229 ABCD1P33897 745 aa13.55□□□□□ -0.24
COPS7A-221ENST00000546229 DDIT3P35638 169 aa13.55□□□□□ -0.24
COPS7A-221ENST00000546229 SMARCB1Q12824 385 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms