RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 FTCDO95954 541 aa20.64■□□□□ 0.9
SKP2-208ENST00000546211 CXCL10P02778 98 aa20.64■□□□□ 0.9
SKP2-208ENST00000546211 WARSP23381 471 aaKnown RBP20.64■□□□□ 0.9
SKP2-208ENST00000546211 PAX3P23760 479 aa20.64■□□□□ 0.9
SKP2-208ENST00000546211 CYP2C18P33260 490 aa20.64■□□□□ 0.9
SKP2-208ENST00000546211 TERF1P54274 439 aa20.64■□□□□ 0.9
SKP2-208ENST00000546211 AMPD2Q01433 879 aa20.64■□□□□ 0.9
SKP2-208ENST00000546211 NOMO2Q5JPE7 1267 aa20.64■□□□□ 0.9
SKP2-208ENST00000546211 DENND1BQ6P3S1 775 aa20.64■□□□□ 0.9
SKP2-208ENST00000546211 DSTYKQ6XUX3 929 aa20.64■□□□□ 0.9
SKP2-208ENST00000546211 LRRC57Q8N9N7 239 aa20.64■□□□□ 0.9
SKP2-208ENST00000546211 MYRIPQ8NFW9 859 aa20.64■□□□□ 0.9
SKP2-208ENST00000546211 C11orf70Q9BRQ4 267 aa20.64■□□□□ 0.9
SKP2-208ENST00000546211 NUP85Q9BW27 656 aa20.64■□□□□ 0.9
SKP2-208ENST00000546211 TANC1Q9C0D5 1861 aa20.64■□□□□ 0.9
SKP2-208ENST00000546211 TMEM39AQ9NV64 488 aa20.64■□□□□ 0.9
SKP2-208ENST00000546211 KANSL3Q9P2N6 904 aa20.64■□□□□ 0.9
SKP2-208ENST00000546211 TBX21Q9UL17 535 aa20.64■□□□□ 0.9
SKP2-208ENST00000546211 COG5Q9UP83 839 aa20.64■□□□□ 0.9
SKP2-208ENST00000546211 PCDHB7Q9Y5E2 793 aa20.64■□□□□ 0.9
SKP2-208ENST00000546211 BRCA2P51587 3418 aa20.64■□□□□ 0.89
SKP2-208ENST00000546211 O00370 1275 aa20.63■□□□□ 0.89
SKP2-208ENST00000546211 MTA2O94776 668 aa20.63■□□□□ 0.89
SKP2-208ENST00000546211 SLU7O95391 586 aaKnown RBP20.63■□□□□ 0.89
SKP2-208ENST00000546211 CALB1P05937 261 aa20.63■□□□□ 0.89
SKP2-208ENST00000546211 CLTBP09497 229 aa20.63■□□□□ 0.89
SKP2-208ENST00000546211 CLLU1OSQ5K130 101 aa20.63■□□□□ 0.89
SKP2-208ENST00000546211 MEI1Q5TIA1 1274 aa20.63■□□□□ 0.89
SKP2-208ENST00000546211 MMS22LQ6ZRQ5 1243 aa20.63■□□□□ 0.89
SKP2-208ENST00000546211 ACOT1Q86TX2 421 aa20.63■□□□□ 0.89
SKP2-208ENST00000546211 PDCL2Q8N4E4 241 aa20.63■□□□□ 0.89
SKP2-208ENST00000546211 ZNF564Q8TBZ8 553 aaPredicted RBP20.63■□□□□ 0.89
SKP2-208ENST00000546211 SENP8Q96LD8 212 aa20.63■□□□□ 0.89
SKP2-208ENST00000546211 RNF216Q9NWF9 866 aaPredicted RBP20.63■□□□□ 0.89
SKP2-208ENST00000546211 LRFN2Q9ULH4 789 aa20.63■□□□□ 0.89
SKP2-208ENST00000546211 M0QYV0 167 aa20.63■□□□□ 0.89
SKP2-208ENST00000546211 BUB1BO60566 1050 aaPredicted RBP20.63■□□□□ 0.89
SKP2-208ENST00000546211 MICAL2O94851 1124 aa20.63■□□□□ 0.89
SKP2-208ENST00000546211 FGFR1P11362 822 aa20.63■□□□□ 0.89
SKP2-208ENST00000546211 MMP8P22894 467 aa20.63■□□□□ 0.89
SKP2-208ENST00000546211 LCLAT1Q6UWP7 414 aa20.63■□□□□ 0.89
SKP2-208ENST00000546211 NECAB2Q7Z6G3 386 aa20.63■□□□□ 0.89
SKP2-208ENST00000546211 SLFN11Q7Z7L1 901 aa20.63■□□□□ 0.89
SKP2-208ENST00000546211 ERICH1Q86X53 443 aa20.63■□□□□ 0.89
SKP2-208ENST00000546211 ABI1Q8IZP0 508 aa20.63■□□□□ 0.89
SKP2-208ENST00000546211 TMEM86AQ8N2M4 240 aa20.63■□□□□ 0.89
SKP2-208ENST00000546211 MSANTD4Q8NCY6 345 aa20.63■□□□□ 0.89
SKP2-208ENST00000546211 TNIP3Q96KP6 325 aa20.63■□□□□ 0.89
SKP2-208ENST00000546211 SNX12Q9UMY4 172 aa20.63■□□□□ 0.89
SKP2-208ENST00000546211 STXBP5LQ9Y2K9 1186 aa20.63■□□□□ 0.89
SKP2-208ENST00000546211 HYOU1Q9Y4L1 999 aa20.63■□□□□ 0.89
SKP2-208ENST00000546211 NCK2O43639 380 aa20.62■□□□□ 0.89
SKP2-208ENST00000546211 PRLRP16471 622 aa20.62■□□□□ 0.89
SKP2-208ENST00000546211 RRM1P23921 792 aa20.62■□□□□ 0.89
SKP2-208ENST00000546211 PEX26Q7Z412 305 aa20.62■□□□□ 0.89
SKP2-208ENST00000546211 DEFB128Q7Z7B8 93 aa20.62■□□□□ 0.89
SKP2-208ENST00000546211 WDTC1Q8N5D0 677 aa20.62■□□□□ 0.89
SKP2-208ENST00000546211 C3orf58Q8NDZ4 430 aa20.62■□□□□ 0.89
SKP2-208ENST00000546211 RABGGTAQ92696 567 aa20.62■□□□□ 0.89
SKP2-208ENST00000546211 PAAF1Q9BRP4 392 aa20.62■□□□□ 0.89
SKP2-208ENST00000546211 TLR10Q9BXR5 811 aa20.62■□□□□ 0.89
SKP2-208ENST00000546211 MRPL47Q9HD33 250 aaKnown RBP20.62■□□□□ 0.89
SKP2-208ENST00000546211 CHORDC1Q9UHD1 332 aaPredicted RBP20.62■□□□□ 0.89
SKP2-208ENST00000546211 TSPAN16Q9UKR8 245 aa20.62■□□□□ 0.89
SKP2-208ENST00000546211 NME7Q9Y5B8 376 aa20.62■□□□□ 0.89
SKP2-208ENST00000546211 SCINQ9Y6U3 715 aa20.62■□□□□ 0.89
SKP2-208ENST00000546211 B3GAT3O94766 335 aa20.61■□□□□ 0.89
SKP2-208ENST00000546211 PDGFRBP09619 1106 aa20.61■□□□□ 0.89
SKP2-208ENST00000546211 TCP1P17987 556 aaKnown RBP20.61■□□□□ 0.89
SKP2-208ENST00000546211 AARSP49588 968 aaKnown RBP eCLIP20.61■□□□□ 0.89
SKP2-208ENST00000546211 RNASELQ05823 741 aaKnown RBP20.61■□□□□ 0.89
SKP2-208ENST00000546211 PTP4A2Q12974 167 aa20.61■□□□□ 0.89
SKP2-208ENST00000546211 WHAMMP3Q1A5X7 153 aa20.61■□□□□ 0.89
SKP2-208ENST00000546211 LRRC26Q2I0M4 334 aa20.61■□□□□ 0.89
SKP2-208ENST00000546211 C2CD6Q53TS8 623 aa20.61■□□□□ 0.89
SKP2-208ENST00000546211 WSCD1Q658N2 575 aa20.61■□□□□ 0.89
SKP2-208ENST00000546211 C11orf63Q6NUN7 778 aa20.61■□□□□ 0.89
SKP2-208ENST00000546211 DCLRE1AQ6PJP8 1040 aa20.61■□□□□ 0.89
SKP2-208ENST00000546211 CRYBG2Q8N1P7 616 aa20.61■□□□□ 0.89
SKP2-208ENST00000546211 C12orf29Q8N999 325 aa20.61■□□□□ 0.89
SKP2-208ENST00000546211 MNS1Q8NEH6 495 aa20.61■□□□□ 0.89
SKP2-208ENST00000546211 FAM193BQ96PV7 902 aaPredicted RBP20.61■□□□□ 0.89
SKP2-208ENST00000546211 AMFRQ9UKV5 643 aa20.61■□□□□ 0.89
SKP2-208ENST00000546211 CEP350Q5VT06 3117 aa20.61■□□□□ 0.89
SKP2-208ENST00000546211 TDRD15B5MCY1 1934 aaKnown RBP20.61■□□□□ 0.89
SKP2-208ENST00000546211 HOXA2O43364 376 aa20.6■□□□□ 0.89
SKP2-208ENST00000546211 ODC1P11926 461 aa20.6■□□□□ 0.89
SKP2-208ENST00000546211 IGFBP6P24592 240 aaPredicted RBP20.6■□□□□ 0.89
SKP2-208ENST00000546211 LMO2P25791 158 aa20.6■□□□□ 0.89
SKP2-208ENST00000546211 RFC2P35250 354 aa20.6■□□□□ 0.89
SKP2-208ENST00000546211 RPS6KA1Q15418 735 aa20.6■□□□□ 0.89
SKP2-208ENST00000546211 GOLGA7BQ2TAP0 167 aa20.6■□□□□ 0.89
SKP2-208ENST00000546211 PPP1R26Q5T8A7 1209 aaPredicted RBP20.6■□□□□ 0.89
SKP2-208ENST00000546211 GOLPH3Q9H4A6 298 aa20.6■□□□□ 0.89
SKP2-208ENST00000546211 DPEP3Q9H4B8 488 aa20.6■□□□□ 0.89
SKP2-208ENST00000546211 FAM49BQ9NUQ9 324 aa20.6■□□□□ 0.89
SKP2-208ENST00000546211 PARVAQ9NVD7 372 aa20.6■□□□□ 0.89
SKP2-208ENST00000546211 TBC1D13Q9NVG8 400 aa20.6■□□□□ 0.89
SKP2-208ENST00000546211 HESX1Q9UBX0 185 aa20.6■□□□□ 0.89
SKP2-208ENST00000546211 STRIP2Q9ULQ0 834 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms