RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 MYO16Q9Y6X6 1858 aa16.83■□□□□ 0.28
CLSTN3-216ENST00000545663 PCDH15Q96QU1 1955 aa16.82■□□□□ 0.28
CLSTN3-216ENST00000545663 PTPRDP23468 1912 aa16.82■□□□□ 0.28
CLSTN3-216ENST00000545663 KIAA1549LQ6ZVL6 1849 aa16.82■□□□□ 0.28
CLSTN3-216ENST00000545663 K7EQS6 105 aa16.82■□□□□ 0.28
CLSTN3-216ENST00000545663 CPA1P15085 419 aa16.82■□□□□ 0.28
CLSTN3-216ENST00000545663 MARCKSP29966 332 aaPredicted RBP16.82■□□□□ 0.28
CLSTN3-216ENST00000545663 NMT1P30419 496 aaKnown RBP16.82■□□□□ 0.28
CLSTN3-216ENST00000545663 ABCG1P45844 678 aa16.82■□□□□ 0.28
CLSTN3-216ENST00000545663 NPY5RQ15761 445 aa16.82■□□□□ 0.28
CLSTN3-216ENST00000545663 CRY1Q16526 586 aa16.82■□□□□ 0.28
CLSTN3-216ENST00000545663 MAP7D1Q3KQU3 841 aa16.82■□□□□ 0.28
CLSTN3-216ENST00000545663 DCAF4L1Q3SXM0 396 aa16.82■□□□□ 0.28
CLSTN3-216ENST00000545663 NAXDQ8IW45 347 aa16.82■□□□□ 0.28
CLSTN3-216ENST00000545663 BLIDQ8IZY5 108 aa16.82■□□□□ 0.28
CLSTN3-216ENST00000545663 MAB21L3Q8N8X9 362 aa16.82■□□□□ 0.28
CLSTN3-216ENST00000545663 HSD17B14Q9BPX1 270 aa16.82■□□□□ 0.28
CLSTN3-216ENST00000545663 KIFC3Q9BVG8 833 aa16.82■□□□□ 0.28
CLSTN3-216ENST00000545663 C22orf23Q9BZE7 217 aa16.82■□□□□ 0.28
CLSTN3-216ENST00000545663 PRORYQ9H606 182 aa16.82■□□□□ 0.28
CLSTN3-216ENST00000545663 ECT2Q9H8V3 914 aa16.82■□□□□ 0.28
CLSTN3-216ENST00000545663 MTMR11A4FU01 709 aa16.81■□□□□ 0.28
CLSTN3-216ENST00000545663 GJB3O75712 270 aa16.81■□□□□ 0.28
CLSTN3-216ENST00000545663 OAZ2O95190 189 aa16.81■□□□□ 0.28
CLSTN3-216ENST00000545663 LYPLA2O95372 231 aa16.81■□□□□ 0.28
CLSTN3-216ENST00000545663 FGF19O95750 216 aa16.81■□□□□ 0.28
CLSTN3-216ENST00000545663 GPR17Q13304 367 aa16.81■□□□□ 0.28
CLSTN3-216ENST00000545663 PPP4R3AQ6IN85 833 aa16.81■□□□□ 0.28
CLSTN3-216ENST00000545663 CC2D1AQ6P1N0 951 aaPredicted RBP16.81■□□□□ 0.28
CLSTN3-216ENST00000545663 TMPRSS7Q7RTY8 843 aa16.81■□□□□ 0.28
CLSTN3-216ENST00000545663 TMEM150AQ86TG1 271 aa16.81■□□□□ 0.28
CLSTN3-216ENST00000545663 SFTPA1Q8IWL2 248 aa16.81■□□□□ 0.28
CLSTN3-216ENST00000545663 RASEFQ8IZ41 740 aa16.81■□□□□ 0.28
CLSTN3-216ENST00000545663 TTC16Q8NEE8 873 aa16.81■□□□□ 0.28
CLSTN3-216ENST00000545663 CCDC43Q96MW1 224 aaKnown RBP16.81■□□□□ 0.28
CLSTN3-216ENST00000545663 POLD4Q9HCU8 107 aa16.81■□□□□ 0.28
CLSTN3-216ENST00000545663 SH3GLB2Q9NR46 395 aa16.81■□□□□ 0.28
CLSTN3-216ENST00000545663 SLC38A7Q9NVC3 462 aa16.81■□□□□ 0.28
CLSTN3-216ENST00000545663 PPP4R2Q9NY27 417 aa16.81■□□□□ 0.28
CLSTN3-216ENST00000545663 MMP17Q9ULZ9 603 aa16.81■□□□□ 0.28
CLSTN3-216ENST00000545663 APOBEC2Q9Y235 224 aaKnown RBP16.81■□□□□ 0.28
CLSTN3-216ENST00000545663 FAM149AA5PLN7 773 aa16.8■□□□□ 0.28
CLSTN3-216ENST00000545663 MARCH6O60337 910 aa16.8■□□□□ 0.28
CLSTN3-216ENST00000545663 RPL9P32969 192 aaKnown RBP16.8■□□□□ 0.28
CLSTN3-216ENST00000545663 YWHAHQ04917 246 aaPredicted RBP16.8■□□□□ 0.28
CLSTN3-216ENST00000545663 BFSP1Q12934 665 aa16.8■□□□□ 0.28
CLSTN3-216ENST00000545663 PDGFRLQ15198 375 aa16.8■□□□□ 0.28
CLSTN3-216ENST00000545663 ATF7IP2Q5U623 682 aa16.8■□□□□ 0.28
CLSTN3-216ENST00000545663 POTEDQ86YR6 584 aa16.8■□□□□ 0.28
CLSTN3-216ENST00000545663 CEP76Q8TAP6 659 aa16.8■□□□□ 0.28
CLSTN3-216ENST00000545663 GIPC2Q8TF65 315 aa16.8■□□□□ 0.28
CLSTN3-216ENST00000545663 SPACA7Q96KW9 195 aa16.8■□□□□ 0.28
CLSTN3-216ENST00000545663 RNF26Q9BY78 433 aaPredicted RBP16.8■□□□□ 0.28
CLSTN3-216ENST00000545663 C2orf40Q9H1Z8 148 aa16.8■□□□□ 0.28
CLSTN3-216ENST00000545663 TDP1Q9NUW8 608 aa16.8■□□□□ 0.28
CLSTN3-216ENST00000545663 STK24Q9Y6E0 443 aa16.8■□□□□ 0.28
CLSTN3-216ENST00000545663 WNT6Q9Y6F9 365 aa16.8■□□□□ 0.28
CLSTN3-216ENST00000545663 CCNT1O60563 726 aaKnown RBP16.79■□□□□ 0.28
CLSTN3-216ENST00000545663 CBFA2T3O75081 653 aa16.79■□□□□ 0.28
CLSTN3-216ENST00000545663 LARGE1O95461 756 aa16.79■□□□□ 0.28
CLSTN3-216ENST00000545663 KCNE1P15382 129 aa16.79■□□□□ 0.28
CLSTN3-216ENST00000545663 ATF6P18850 670 aa16.79■□□□□ 0.28
CLSTN3-216ENST00000545663 AVPR1AP37288 418 aa16.79■□□□□ 0.28
CLSTN3-216ENST00000545663 YARSP54577 528 aaKnown RBP16.79■□□□□ 0.28
CLSTN3-216ENST00000545663 CAMK2BQ13554 666 aa16.79■□□□□ 0.28
CLSTN3-216ENST00000545663 TXNDC8Q6A555 127 aa16.79■□□□□ 0.28
CLSTN3-216ENST00000545663 PCSK4Q6UW60 755 aa16.79■□□□□ 0.28
CLSTN3-216ENST00000545663 CENPQQ7L2Z9 268 aaPredicted RBP16.79■□□□□ 0.28
CLSTN3-216ENST00000545663 ITIH5Q86UX2 942 aa16.79■□□□□ 0.28
CLSTN3-216ENST00000545663 CPA6Q8N4T0 437 aa16.79■□□□□ 0.28
CLSTN3-216ENST00000545663 SPRYD3Q8NCJ5 442 aa16.79■□□□□ 0.28
CLSTN3-216ENST00000545663 HMGB4Q8WW32 186 aa16.79■□□□□ 0.28
CLSTN3-216ENST00000545663 CLMPQ9H6B4 373 aa16.79■□□□□ 0.28
CLSTN3-216ENST00000545663 NCOA5Q9HCD5 579 aaKnown RBP16.79■□□□□ 0.28
CLSTN3-216ENST00000545663 ZDHHC4Q9NPG8 344 aa16.79■□□□□ 0.28
CLSTN3-216ENST00000545663 CDC25CP30307 473 aa16.78■□□□□ 0.28
CLSTN3-216ENST00000545663 HOXD12P35452 270 aa16.78■□□□□ 0.28
CLSTN3-216ENST00000545663 GRM5P41594 1212 aa16.78■□□□□ 0.28
CLSTN3-216ENST00000545663 CFHR1Q03591 330 aa16.78■□□□□ 0.28
CLSTN3-216ENST00000545663 SLC14A1Q13336 389 aa16.78■□□□□ 0.28
CLSTN3-216ENST00000545663 ALLCQ8N6M5 410 aa16.78■□□□□ 0.28
CLSTN3-216ENST00000545663 DEPTORQ8TB45 409 aa16.78■□□□□ 0.28
CLSTN3-216ENST00000545663 WHAMMQ8TF30 809 aa16.78■□□□□ 0.28
CLSTN3-216ENST00000545663 BRF1Q92994 677 aa16.78■□□□□ 0.28
CLSTN3-216ENST00000545663 AIFM3Q96NN9 605 aa16.78■□□□□ 0.28
CLSTN3-216ENST00000545663 GCNAQ96QF7 691 aa16.78■□□□□ 0.28
CLSTN3-216ENST00000545663 SEPT5Q99719 369 aaPredicted RBP16.78■□□□□ 0.28
CLSTN3-216ENST00000545663 CCDC94Q9BW85 323 aaPredicted RBP16.78■□□□□ 0.28
CLSTN3-216ENST00000545663 CDT1Q9H211 546 aa16.78■□□□□ 0.28
CLSTN3-216ENST00000545663 ANO2Q9NQ90 1003 aa16.78■□□□□ 0.28
CLSTN3-216ENST00000545663 DUS2Q9NX74 493 aaKnown RBP16.78■□□□□ 0.28
CLSTN3-216ENST00000545663 BCCIPQ9P287 314 aaKnown RBP eCLIP16.78■□□□□ 0.28
CLSTN3-216ENST00000545663 TUBGCP4Q9UGJ1 667 aa16.78■□□□□ 0.28
CLSTN3-216ENST00000545663 PTPN13Q12923 2485 aa16.78■□□□□ 0.28
CLSTN3-216ENST00000545663 GOLGA4Q13439 2230 aaKnown RBP16.78■□□□□ 0.28
CLSTN3-216ENST00000545663 M0QZQ0 153 aa16.77■□□□□ 0.28
CLSTN3-216ENST00000545663 SGK1O00141 431 aa16.77■□□□□ 0.28
CLSTN3-216ENST00000545663 ALDH1A2O94788 518 aa16.77■□□□□ 0.28
CLSTN3-216ENST00000545663 ATXN1LP0C7T5 689 aaKnown RBP16.77■□□□□ 0.28
CLSTN3-216ENST00000545663 IFNAR1P17181 557 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms